Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name SNX6
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name sorting nexin 6
Also known as MSTP010|TFAF2
Coordinate chr14:34561093-34630148
Strand -
Gene summary This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein associates with the long isoform of the leptin receptor, the transforming growth factor-beta family of receptor serine-threonine kinases, and with receptor tyrosine kinases for platelet-derived growth factor, insulin, and epidermal growth factor. This protein may form oligomeric complexes with family member proteins through interactions of both the PX domain and the coiled coil regions of the molecules. Translocation of this protein from the cytoplasm to the nucleus occurs after binding to proviral integration site 1 protein. This gene results in two transcripts encoding two distinct isoforms. [provided by RefSeq, Jul 2008]

Retrocopy(s) from SNX6

Retroname Coord Strand Genomic Region ENSG
SNX6P1 chr19:23125840-23127804 - Intragenic
 ENSG00000267920 UCSC

Expression

Transcript Sequences

>NM_152233.4
GCGCCTGCGCCGGCCCTCGCCTCGGAGCAGCCATGATGGAAGGCCTGGACGACGGCCCGGACTTCCTCTCAGAAGAGGACCGCGGACTTAAAGCAATAAATGTAGATCTTCAAAGTGATGCTGCTCTGCAGGTGGACATTTCTGATGCTCTTAGTGAGCGGGATAAAGTAAAATTCACTGTTCACACAAAGAGTTCATTGCCAAATTTTAAACAAAACGAGTTTTCAGTTGTTCGGCAACATGAGGAATTTATCTGGCTTCATGATTCCTTTGTTGAAAATGAAGACTATGCAGGTTATATCATTCCACCAGCACCACCAAGACCTGATTTTGATGCTTCAAGGGAAAAACTACAGAAGCTTGGTGAAGGAGAAGGGTCAATGACGAAGGAAGAATTCACAAAGATGAAACAGGAACTGGAAGCTGAATATTTGGCAATATTCAAGAAGACAGTTGCGATGCATGAAGTGTTCCTGTGTCGTGTGGCAGCACATCCTATTTTGAGAAGAGATTTAAATTTCCATGTCTTCTTGGAATATAATCAAGATTTGAGTGTGCGAGGAAAAAATAAAAAAGAGAAACTTGAAGACTTCTTTAAAAACATGGTTAAATCAGCAGATGGAGTAATCGTTTCAGGAGTAAAGGATGTAGATGATTTCTTTGAGCACGAACGAACATTTCTTTTGGAGTATCATAACCGAGTTAAGGATGCATCTGCTAAATCTGATAGAATGACAAGATCCCACAAAAGTGCTGCAGATGATTACAATAGAATTGGTTCTTCATTATATGCTTTAGGAACTCAGGATTCTACAGATATATGCAAGTTTTTTCTCAAAGTTTCAGAACTGTTCGATAAAACAAGAAAAATAGAAGCACGAGTGTCTGCTGATGAAGACCTCAAACTTTCTGATCTTTTAAAATATTACTTAAGAGAATCTCAAGCTGCTAAGGATCTCCTGTATCGAAGGTCTAGGTCACTAGTGGATTATGAAAATGCTAATAAAGCACTGGATAAAGCAAGAGCAAAAAATAAAGATGTTCTACAGGCCGAAACTTCCCAACAATTATGTTGTCAGAAATTTGAAAAAATATCTGAGTCTGCAAAACAAGAACTTATAGATTTTAAGACAAGAAGAGTTGCTGCATTCAGAAAAAATTTAGTGGAACTGGCAGAGTTAGAACTGAAGCATGCAAAGGGTAATCTACAGTTGCTGCAGAACTGCCTGGCAGTGTTAAATGGAGACACATAAGCCACACTCCGCCTTCCTGTTAAAAAGGGCTGCCTTCCTTCAAATTTTATTTTTGTTTTCTTAATGATGTTAAGCATTTATGCTCACTGGAAACAAACAAAAAGCAGCTGAAAAAGTGCATCAACTCCTCTTTTTCTGAGAAACATGGAGCAGCGCACGCCCAGGCGATGCCAGTCTGTGTGCCGTGATGCCGCACTGTGTTCCCCATGACAGTGGTCCATCATCGTGCACTCGTCATACTCAGAAGTCCAAAGTTCATTCTTCTTTAAAGTAGCCTCTATAACTCTGTTTATTTTATAAATAGTATTCCTTATGGCTGCCACTCTTATTTACCTTTAAATAATTTCTGAAATTTAACCTTTTCAGAATGCATTGTTGAAACAAGATAAAGATTGCCTTTTTTGAATTTTTTAAATTTTGTTTTTAAAAGCATATACCACCTTAGTTCATTCATGTATCCTGGTAAAGCATCTTAATCAGACTTATTTTTAATTACTGAATATTTCTTAGACGTTTTGGGACAGATTTTATGTAATCTTTATAAGTATGATTTCTGAAGAAAAGCAAATGCATTAGTATGTTTGCCTTAAACTTGTAGACTAAACCAAGTATTGTAAAATAAACAGCGATAACAGTGATAGTTTTTAACTCTATGGTCATTGTATCACTCTGGAAAATGTGGAGTAGCTGTAATAAATCTACTCCTGTATTATGCTTTACAGTGCAGGTCTTAGTTTTTCTTTTTTCTCATTTCTTTTGAAATGGCATCTCGAACAAAGTCCACCAATCCCTTTACAAAAGAATGAACTGCTCCTCTGTGTGTACTTCATAGAAGGTGGAATCGGACAGAGGCAGGTTAGTGACAGTTATTCCTGAAATACAGGAGCAGAGTACAGTCTGTTGTGGTTTCCCGGATTCCGCGCCTAGCTCAGCCAATTAAGCATGAGACATAGGCCATTGAGCCACTTAGTAGTTATGCGAGTGGATAGATTGGTATGTAGAGGGAAAGAGGTCTGCTGTAAAGAACAACACTTGTTTGTCTGTGGGGAAAGAAAAGCAGAATACTTGAGATGAAAGTTGGCATACAAATAGGATACTATCGCCAGTAGTTATATTACAAACATTATCGGCCTTTCTAGTGTGAATGAACATTAGACACATTATTGTCATTCCTAGTTTAAAGTTAAGGTTGCGTGGTTGGATTTTTCCACTATCTTTTTCTAATTTTTCTACCATTTGGAGACCGTAGGCATTTGGGCCTGTCACCCCTTGGATGGGTTCCTAGTTTGTTTACATTTTCCTGAACCCTCCTGAGCGCCCGTTCTTGGTCTAATCCCCAGTCGTGATGATTCCACACTTCCTCAGCCGCATGTTGTCTTGCCTCATTCATGAGCTGGTCAGCGTTTCGTCTCTTTAACTGACATGTTCCCCAGTGCTGTTTGAACTGTTGAGTTTCCGTTGCTGGCTGAGTGCGTTTTGTCCTTCACGTAACCTTCGCTGGTAAAAATAAGCCCAtgtgatgtccaccagtggatgaatgctggaccgagagccctagcttctggatccaggtctaggcccttcatctgctgctctgtggcccagggcaggtttgcttgacctctgcctcagttctcgactctaaaggacatactgacctacctcacaggggtgttgtgaggattaataaatgttggtactctgctttggaaatgtgaaaatgctgtgtaaatgttaagaaatactaAGTATAGGGCCAGAAGCTATACAGTGTTTCACTTAACCGTTTGCCATTCTGTATTTACCAAGGTGGTCTTTTCTGGGGAAGGAAGTAGAGTGGAAGGTGCATCCCTTGGCCCCTGGTTTACATTATTAGGGTGCTTATTGTAGGAATGCACTCTAAAAAGTGGGCGTAGAATGAAAGCAGCCGTCcagtggtcctcccttttctgtagtttcacttttcttgcttcaagttacagcagtcacctgaaatctgaaaatactaaatgaaaaactccagaaacaa