Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RAB6A
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name RAB6A, member RAS oncogene family
Also known as RAB6
Coordinate chr11:73675638-73761074
Strand -
Gene summary This gene encodes a member of the RAB family, which belongs to the small GTPase superfamily. GTPases of the RAB family bind to various effectors to regulate the targeting and fusion of transport carriers to acceptor compartments. This protein is located at the Golgi apparatus, which regulates trafficking in both a retrograde (from early endosomes and Golgi to the endoplasmic reticulum) and an anterograde (from the Golgi to the plasma membrane) directions. Myosin II is an effector of this protein in these processes. This protein is also involved in assembly of human cytomegalovirus (HCMV) by interacting with the cellular protein Bicaudal D1, which interacts with the HCMV virion tegument protein, pp150. Multiple alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Aug 2011]

Retrocopy(s) from RAB6A

Retroname Coord Strand Genomic Region ENSG
RAB6D chr2:131360857-131364156 - Intergenic
ENSG00000233087 UCSC
RAB6C-AS1 chr2:129979665-129982995 + Intergenic
ENSG00000225449 UCSC

Expression

Transcript Sequences

>NM_002869.5
ACTCAGCAGGTTGGGCTGCGGCGGCGGCGGCAGCTGTGGAAGCTCAGGCGCTGCGCGTGAGAGGTCCCAGATACGTCTGCGGTTCCGGCTCCGCCACCCTCAGCTTCTCTTCCCCAGGTCTGGGAGCCGAGTGCGGAAGGAGGGAACGGCCCTAGCTTTGGGAAGCCAGAGGACACCCCTGGCTCCTGCCGACACCGCCCTCCTTCCCTTCCCAGCCGCGGGCCTCGCTCGGTGCTAGGCTACTCTGCCGGGAGGCGGCGGCGGCTGCCAGTCTGTGGAGAGTCCTGCTGCCCTCCAGCCGGGCTCCTCCACCGGGCCTTGCAGGGGCCGAGAGAGCTCGGTGCCCGCCCTTCCGCTCGCCTTTTTCGTCAGCTGGCTGGAGCAGCATCGGTCCGGGAGGTCTCTAGGCTGAGGCGGCGGCCGCTCCTCTAGTTCCACAATGTCCACGGGCGGAGACTTCGGGAATCCGCTGAGGAAATTCAAGCTGGTGTTCCTGGGGGAGCAAAGCGTTGGAAAGACATCTTTGATCACCAGATTCATGTATGACAGTTTTGACAACACCTATCAGGCAACAATTGGCATTGACTTTTTATCAAAAACTATGTACTTGGAGGATCGAACAATCAGGCTTCAGCTGTGGGATACTGCGGGTCAGGAACGTTTCCGTAGCCTCATTCCCAGTTACATCCGTGATTCTGCTGCAGCTGTAGTAGTTTACGATATCACAAATGTTAACTCATTCCAGCAAACTACAAAGTGGATTGATGATGTCAGAACAGAAAGAGGAAGTGATGTTATCATCATGCTAGTAGGAAATAAAACAGATCTTGCTGACAAGAGGCAAGTGTCAATTGAGGAGGGAGAGAGGAAAGCCAAAGAGCTGAATGTTATGTTTATTGAAACTAGTGCAAAAGCTGGATACAATGTAAAGCAGCTCTTTCGACGTGTAGCAGCAGCTTTGCCGGGAATGGAAAGCACACAGGACAGAAGCAGAGAAGATATGATTGACATAAAACTGGAAAAGCCTCAGGAGCAACCAGTCAGTGAAGGAGGCTGTTCCTGCTAATCTCCCATGTCATCTTCAACCTTCTTCAGAAGCTCACTGCTTTGGCCCCCTTACTCTTTCATTGACTGCAGTGTGAATATTGGCTTGAACCTTTTCCCTTCAGTAATAACGTATTGCAATTCATCATTGCTGCCTGTCTCGTGGAGATGATCTATTAGCTTCACAAGCACAACAAAAGTCAGTGTCTTCATTATTTATATTTTACAAAAAGCCAAAATATTTCAGCATATTCCAGTGATAACTTTAAAAATTAGATACATTTTCTTAACATTTTTTTCTTTTTTAATGTTATGATAATGTACTTCAAAATGATGGAAATCTCAACAGTATGAGTATGGCTTGGTTAACGAGCGGTATGTTCACAGCCTACTTTATCTCTCCTTGCTTTTCTCACCTCTCACTTACCCCCATTCCCTATTACCCTATTCTTACCTAGCCTCCCCCGACTTCCTCAAAACAAACAAGAGATGGCAAAGCAGCAGTTCTACCAAGCCCATTGGAATTATCCTTTAATTTTACAGATACCACTTGCTGTAGGCTACGGACCAAGATGTCCAAAATTATTCTTGAGCACTGATATAAATTACGGTCTTCTTTGAGGTCAAAATTCAGCCATCATGGTAGGCAGTGCTTGAATGAGAAAAGGCTCCTGGTGCATCTTCAAAATGAGTCCTAAAGAACATACTGAGTACTTAGAAGTAGAAGAACATAAGATGTATTTCTGACTAAAACAAATGGCTCTTTCACATGTGCTTTATTAGACTCTGGGAGAGAAAATTAACCAAGTGCTTCAGAACAGGTTTTTAGTATTTAATTCTTCACGGTAAGAAAATGAAGTTCTAATGAACTGTTTCTCCCAAGGTTTTAAAATTGTCAAGAGTTATTCTGTTTGTTTAAAAAATAAGAAACCTCTTTAAGCAATAGATTTTGCTTGGGTTTTCTTTTTTAAAAACATAATACTGTGCAGGCAAGGCACTGTAAAAGTTTTAATTCCTTCCAGAAGAACCAGTGGAAGAATTTAAATTTGGCGCTACGATCAAAACTACTGAATTAGTAGAAATAATGATGTCTAAAGCTTACCAACAAAAGAACCCTCAGCAGAATAACAAAAACTTTGCTCAGGACATTTGAGGTCAAATTGAAGACGGAAACCGGAAACCGTTTTCTTGTAAGCCCCTAGAGGCAGATCAGGTAAAGCATACATAGTAGAGGGAAAGGAGAGAATGGAAATAAAACTCAATATTATGCAGATTTATGCCTTATTTTTTAGCATTTTTTAAGGTTGGGTCTTTCAGGCTGGTTTTGGTTTGTATTAGATCTGTATAGTTTAATTAACTGGTGATTTAGTTTTATATTTAAGCTACAATTAATCTTTTTTCTTTGGTGATATTTATTTCTTTGCCTTTTTTTTTTTTAACAACTTTCAATCTTCAGATGTTTCGTTGAATCTATTTAGAGCTTCACCATGGCAATATGTATTTCCCTTAAAACACTGCAAACAAATATACTAGGAGTGTGCCCTTTTAATCTTTACTAGTTATTGTGAGATTGCTGTGTAAGCTAATAAACACATTTGTAAATACATTGTTTGCAGGACGAAAACTTCTGAGTTACAGCTCAGGAAAAGCCTGCTGAATTTATGTTGTAAGCATTACTTAACACAGTATAAAGATGAAAAGACAACAAAAATATCTTCATACTTCCTCATCCCCTCATTGGAACAAAACCTTAAACTGGGAGAACCTTAGTCCCCTCTCTTTCCTCTTCCTCCTCCACTTCCCACTTATTGTCACCTTGTAATATTCAGAGAGCACTTGGATTATGGATCTGAATAGAGAAATGCTTACAGATAATCATTAGCCCACATACCAGTAACTTATACTTAAAGATGGGATGGAGTTGTAAAGTGCTTTTATAATACAATATAATTGTTAAAGGCAAGGGTTGACTCTTTGTTTTATTTTGACATGGCATGTCCTGAAATAAATATTGATTCAATATGGCAGATGGGTCATATTCTTTATTTGGAAGAAGTTGTGACTTCTGACATGGGTGTGATTGTCTTCCTACACTGTTGCATTTGATTCTTTTTATGTATTTTTAAGAAAGTAACCAGTTATACTGCTTTTAATATTGATTGGTCTTTTTATTTGGCTTGGAGTTCTTCAAAGCATTGAAGTGTGTTCATAGTCCAGGTTTTTTTTTTAATAAACACAATTTTGCTGCCAAAAATATATAAATAAAACACGAAAGAAAACAA
>NM_198896.2
ACTCAGCAGGTTGGGCTGCGGCGGCGGCGGCAGCTGTGGAAGCTCAGGCGCTGCGCGTGAGAGGTCCCAGATACGTCTGCGGTTCCGGCTCCGCCACCCTCAGCTTCTCTTCCCCAGGTCTGGGAGCCGAGTGCGGAAGGAGGGAACGGCCCTAGCTTTGGGAAGCCAGAGGACACCCCTGGCTCCTGCCGACACCGCCCTCCTTCCCTTCCCAGCCGCGGGCCTCGCTCGGTGCTAGGCTACTCTGCCGGGAGGCGGCGGCGGCTGCCAGTCTGTGGAGAGTCCTGCTGCCCTCCAGCCGGGCTCCTCCACCGGGCCTTGCAGGGGCCGAGAGAGCTCGGTGCCCGCCCTTCCGCTCGCCTTTTTCGTCAGCTGGCTGGAGCAGCATCGGTCCGGGAGGTCTCTAGGCTGAGGCGGCGGCCGCTCCTCTAGTTCCACAATGTCCACGGGCGGAGACTTCGGGAATCCGCTGAGGAAATTCAAGCTGGTGTTCCTGGGGGAGCAAAGCGTTGGAAAGACATCTTTGATCACCAGATTCATGTATGACAGTTTTGACAACACCTATCAGGCAACAATTGGCATTGACTTTTTATCAAAAACTATGTACTTGGAGGATCGAACAGTACGATTGCAATTATGGGACACAGCAGGTCAAGAGCGGTTCAGGAGCTTGATTCCTAGCTACATTCGTGACTCCACTGTGGCAGTTGTTGTTTATGATATCACAAATGTTAACTCATTCCAGCAAACTACAAAGTGGATTGATGATGTCAGAACAGAAAGAGGAAGTGATGTTATCATCATGCTAGTAGGAAATAAAACAGATCTTGCTGACAAGAGGCAAGTGTCAATTGAGGAGGGAGAGAGGAAAGCCAAAGAGCTGAATGTTATGTTTATTGAAACTAGTGCAAAAGCTGGATACAATGTAAAGCAGCTCTTTCGACGTGTAGCAGCAGCTTTGCCGGGAATGGAAAGCACACAGGACAGAAGCAGAGAAGATATGATTGACATAAAACTGGAAAAGCCTCAGGAGCAACCAGTCAGTGAAGGAGGCTGTTCCTGCTAATCTCCCATGTCATCTTCAACCTTCTTCAGAAGCTCACTGCTTTGGCCCCCTTACTCTTTCATTGACTGCAGTGTGAATATTGGCTTGAACCTTTTCCCTTCAGTAATAACGTATTGCAATTCATCATTGCTGCCTGTCTCGTGGAGATGATCTATTAGCTTCACAAGCACAACAAAAGTCAGTGTCTTCATTATTTATATTTTACAAAAAGCCAAAATATTTCAGCATATTCCAGTGATAACTTTAAAAATTAGATACATTTTCTTAACATTTTTTTCTTTTTTAATGTTATGATAATGTACTTCAAAATGATGGAAATCTCAACAGTATGAGTATGGCTTGGTTAACGAGCGGTATGTTCACAGCCTACTTTATCTCTCCTTGCTTTTCTCACCTCTCACTTACCCCCATTCCCTATTACCCTATTCTTACCTAGCCTCCCCCGACTTCCTCAAAACAAACAAGAGATGGCAAAGCAGCAGTTCTACCAAGCCCATTGGAATTATCCTTTAATTTTACAGATACCACTTGCTGTAGGCTACGGACCAAGATGTCCAAAATTATTCTTGAGCACTGATATAAATTACGGTCTTCTTTGAGGTCAAAATTCAGCCATCATGGTAGGCAGTGCTTGAATGAGAAAAGGCTCCTGGTGCATCTTCAAAATGAGTCCTAAAGAACATACTGAGTACTTAGAAGTAGAAGAACATAAGATGTATTTCTGACTAAAACAAATGGCTCTTTCACATGTGCTTTATTAGACTCTGGGAGAGAAAATTAACCAAGTGCTTCAGAACAGGTTTTTAGTATTTAATTCTTCACGGTAAGAAAATGAAGTTCTAATGAACTGTTTCTCCCAAGGTTTTAAAATTGTCAAGAGTTATTCTGTTTGTTTAAAAAATAAGAAACCTCTTTAAGCAATAGATTTTGCTTGGGTTTTCTTTTTTAAAAACATAATACTGTGCAGGCAAGGCACTGTAAAAGTTTTAATTCCTTCCAGAAGAACCAGTGGAAGAATTTAAATTTGGCGCTACGATCAAAACTACTGAATTAGTAGAAATAATGATGTCTAAAGCTTACCAACAAAAGAACCCTCAGCAGAATAACAAAAACTTTGCTCAGGACATTTGAGGTCAAATTGAAGACGGAAACCGGAAACCGTTTTCTTGTAAGCCCCTAGAGGCAGATCAGGTAAAGCATACATAGTAGAGGGAAAGGAGAGAATGGAAATAAAACTCAATATTATGCAGATTTATGCCTTATTTTTTAGCATTTTTTAAGGTTGGGTCTTTCAGGCTGGTTTTGGTTTGTATTAGATCTGTATAGTTTAATTAACTGGTGATTTAGTTTTATATTTAAGCTACAATTAATCTTTTTTCTTTGGTGATATTTATTTCTTTGCCTTTTTTTTTTTTAACAACTTTCAATCTTCAGATGTTTCGTTGAATCTATTTAGAGCTTCACCATGGCAATATGTATTTCCCTTAAAACACTGCAAACAAATATACTAGGAGTGTGCCCTTTTAATCTTTACTAGTTATTGTGAGATTGCTGTGTAAGCTAATAAACACATTTGTAAATACATTGTTTGCAGGACGAAAACTTCTGAGTTACAGCTCAGGAAAAGCCTGCTGAATTTATGTTGTAAGCATTACTTAACACAGTATAAAGATGAAAAGACAACAAAAATATCTTCATACTTCCTCATCCCCTCATTGGAACAAAACCTTAAACTGGGAGAACCTTAGTCCCCTCTCTTTCCTCTTCCTCCTCCACTTCCCACTTATTGTCACCTTGTAATATTCAGAGAGCACTTGGATTATGGATCTGAATAGAGAAATGCTTACAGATAATCATTAGCCCACATACCAGTAACTTATACTTAAAGATGGGATGGAGTTGTAAAGTGCTTTTATAATACAATATAATTGTTAAAGGCAAGGGTTGACTCTTTGTTTTATTTTGACATGGCATGTCCTGAAATAAATATTGATTCAATATGGCAGATGGGTCATATTCTTTATTTGGAAGAAGTTGTGACTTCTGACATGGGTGTGATTGTCTTCCTACACTGTTGCATTTGATTCTTTTTATGTATTTTTAAGAAAGTAACCAGTTATACTGCTTTTAATATTGATTGGTCTTTTTATTTGGCTTGGAGTTCTTCAAAGCATTGAAGTGTGTTCATAGTCCAGGTTTTTTTTTTAATAAACACAATTTTGCTGCCAAAAATATATAAATAAAACACGAAAGAAAACAA