Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RAD23B
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name RAD23 homolog B, nucleotide excision repair protein
Also known as HHR23B|HR23B|P58
Coordinate chr9:107283279-107332194
Strand +
Gene summary The protein encoded by this gene is one of two human homologs of Saccharomyces cerevisiae Rad23, a protein involved in the nucleotide excision repair (NER). This protein was found to be a component of the protein complex that specifically complements the NER defect of xeroderma pigmentosum group C (XP-c) cell extracts in vitro. This protein was also shown to interact with, and elevate the nucleotide excision activity of 3-methyladenine-DNA glycosylase (MPG), which suggested a role in DNA damage recognition in base excision repair. This protein contains an N-terminal ubiquitin-like domain, which was reported to interact with 26S proteasome, and thus this protein may be involved in the ubiquitin mediated proteolytic pathway in cells. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Sep 2011]

Retrocopy(s) from RAD23B

Retroname Coord Strand Genomic Region ENSG
RAD23BP2 chr7:83663713-83666044 + Intergenic
ENSG00000230244 UCSC
RAD23BP1 chr3:18538604-18540707 + Intergenic
ENSG00000236570 UCSC

Expression

Transcript Sequences

>NM_001244713.1
gatcaggggctttggtgttaagtagacctgagttccatttgtggttttgtaacttatttgctatgaccttgggcaaattacggttagtttcattctctgtataatagggataatacctgccttgcagagatgtgaagattagatgGTGAAAGCACTGAAAGAGAAGATTGAATCTGAAAAGGGGAAAGATGCCTTTCCAGTAGCAGGTCAAAAATTAATTTATGCAGGCAAAATCCTCAATGATGATACTGCTCTCAAAGAATATAAAATTGATGAGAAAAACTTTGTGGTGGTTATGGTGACCAAACCCAAAGCAGTGTCCACACCAGCACCAGCTACAACTCAGCAGTCAGCTCCTGCCAGCACTACAGCAGTTACTTCCTCCACCACCACAACTGTGGCTCAGGCTCCAACCCCTGTCCCTGCCTTGGCCCCCACTTCCACACCTGCATCCATCACTCCAGCATCAGCGACAGCATCTTCTGAACCTGCACCTGCTAGTGCAGCTAAACAAGAGAAGCCTGCAGAAAAGCCAGCAGAGACACCAGTGGCTACTAGCCCAACAGCAACTGACAGTACATCGGGTGATTCTTCTCGGTCAAACCTTTTTGAAGATGCAACGAGTGCACTTGTGACGGGTCAGTCTTACGAGAATATGGTAACTGAGATCATGTCAATGGGCTATGAACGAGAGCAAGTAATTGCAGCCCTGAGAGCCAGTTTCAACAACCCTGACAGAGCAGTGGAGTATCTTTTAATGGGAATCCCTGGAGATAGAGAAAGTCAGGCTGTGGTTGACCCCCCTCAAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGCAGTGGCTGCAGCTGcagcaactacgacagcaacaactacaacaacaaGTTCTGGAGGACATCCCCTTGAATTTTTACGGAATCAGCCTCAGTTTCAACAGATGAGACAAATTATTCAGCAGAATCCTTCCTTGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCTCAATTACTTCAGCAAATTAGCCAACACCAGGAGCATTTTATTCAGATGTTAAATGAACCAGTTCAAGAAGCTGGTGGTCAaggaggaggaggtggaggtggcagtggaggaATTGCAGAAGCTGGAAGTGGTCATATGAACTACATTCAAGTAACACCTCAGGAAAAAGAAGCTATAGAAAGGTTAAAGGCATTAGGATTTCCTGAAGGACTTGTGATACAAGCGTATTTTGCTTGTGAGAAGAATGAGAATTTGGCTGCCAATTTTCTTCTACAGCAGAACTTTGATGAAGATTGAAAGGGACTTTTTTATATCTCACACTTCACACCAGTGCATTACACTAACTTGTTCACTGGATTGTCTGGGATGACTTGGGCTCATATCCACAATACTTGGTATAAGGTAGTAGATTGTTGGGGGTGGGGAGGGAGGGATCTAGGATACAGGGCAGGGATAAATACAGTGCATGTCTGCTTCAATTAGCAGATGCCGCAACTCCACACAGTGTGTAAAATATATACAACCAAAAATCAGCTTTTGCAGGTCTTTATTTCTTCTGTAAAACAGTAGGTAACTTTTCCTAGGTTTCACTCTTTTTAGTGTACTAGATCCAGAAACTTAGTGTAATGCCCTGCTTTATATTTCTTTGACTTAACATTGGTTTCAGAAAGAATCTTAGCTACCTAGAATTTACAGTCTCTGTTTCATGGCAACACTGGATAATGGCTTTGTGAAATTTAAAAAATTTTTGTAGCGACTGTAAACAGAAATGCCAAATTGATGGTTAATTGTTGCTGCTTCAAAAATAAGTATAAAATTAATATGTAAGGAAGCCCATTCTTTCATGTTAAATACTTGGGGTGGGAGGGGAGAAAGGGAACCTTTTCTTAAAATGAAAATAATTACTGCTATTTTAAAATTTCTTGATCATTGAATGTGAGACCCTTCTAACATGATTTGAGAAGCTGTACAAGTATAGGCAGAGTTATTTTCCTGTTTACATTTTTTTTTTGTTTTGGGGAAAAAATTGGTAGGTGTCTAATTACTGTTTACTTCATTGTTATATTGCAGTAAAAGTTTTAAAACAACCATTGCATGTTTGCTTTTGATGTATCCCTTTGTGAAATTAGCACTTTTGGGGCCAATGGAGAAATGCAGCATTCACTCTCCCTGTCTTTTCCCCTTCCCTCAGCAGAAACGTGTTTATCAGCAAGTCGTGAGTCAAACTGCTGCCTTTTAAAAAACCCACAAAATGCTGATTCAGTTCAAAATTAATGCAAATGTTTCAAAACTGGGTTTCTGATATTTGTAAATGTGTTTCTTTATTAGATAAGAGTGTATTACCATTAAAGTCATTAGTATAATATTGCTTTCAAAAAGAAATGGTAGACAAAACTATAATCCAGCATCTTTTATTGCATTGGAAAGACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGGAAAATATACAATCAAGATATCTCATGGCATATTAAAAGAAAAATCTTAATAGCAGTGTTGGCTTTTATTTGGATTTTTTCATCTCAGTTTTTTCTGTGGAATCTCCTTCATTGGCATTGTTATTTAATCATAAACGGGGCAGATGTCTACTTGTTCAGTTTTTCAAATCTGTTTTCCTGAGTATAAATAAGAGTATTTAAAGAAATAATTTGGATTGCTTTTGTTTTTTGTTTCCTTTTTTTTAACCATCTGATACTAAGAAGATGAATTTGCACAGATTTCTCTGCATAATTTCTCAATATCTTTAGCACAGTATGGTGATGATGACTTTTAAGCATTTACATCACGTACTCATAACCTATTATGAAAATAAATGAAACTggctgggtatggtggctcatgcctataatcccagcactttgggaggccgaggtgggcagatcacttgaggccaggagattgagaccagcctgaccgtcatggcgaaaccccgtctatactaaaaatacaaaaaatagccaggcatggtggcgcacgcctgtggtcccagctacttgggaggctgaggcatgagaattgcttgaacccgggaagtgaaggttgccgtgagctgagatcacaccactgcCATAAACATGACAGGCTTTTGGACTTTGTATTACCTGTATGTTTTATAATGGATCATGCATAATTTCTCAGGAGAATAAAATGAGAATTCATATATACGTTCATCTTTCAAGTCAGAGCAATGAGTTGGGAAAAGAGGTGGCATTTCTGATCGGATAATGGAATACTCTCATTTATTTTATGACATTCTCTGTCTACTCAGATCATAGTGAAAACTGGAAACAAAAAAAAAAAACAGCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATATACTAGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACAGTACCTTGTTTATCTGCTTCTTAAAGAATCAGCCGAGACACCATAAAAGAAATAGGCTTTTTGTGCCTTTTGCTGTTAATGTTTAATTTACAAACTGTTTTGGTAAATCTCTTAATGTAAGTAGCTATTTGACTTTGGAATTTTGCATTCGAGGTATACTGTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAAGCCTAAGTTTGTATTTGTAAATTTCTTATGCCATCCTCTAGTCAAATTTTTTTTCATTGTTTAAAAATACGGAAGTGTTCCAATATAATTTTTTCCTGTACTGGATGGCTAGGATTCTAGAGAATTGATTATAAAATATTTTCAATACATCCAA
>NM_002874.5
GAGTCACGATGATGGCGGCCACCATCCTGTGGTGAGCTAGCGGATTCCCTGCTTGTCTCGCCGACCCCCTCGCGCCTTCTGCAGACTCCGTGGCTGGCGCTCGGCGCGTGAGGAAGCACGGCGGCCCGAGTTCGCGGGGAAGGCCGCAGTCGCGGAGGCAGCGGCGCGGTCCGGGGCACGGGCTGGGGGAGAGGCCGCTCCGCTGGGCGAATGTGACAAGCCCCCACCCCCACCGCCTTCCTCCCCAGAGCGCGAGGAGCGCGGGCGACCCCGGGGCCCCGCCAGGCCACAGACCCCGCCCAGCGGCCAGCACCCGGCGCAGGCCCGGCAGCCGAGCTGCGCGGCGGCACCATGCAGGTCACCCTGAAGACCCTCCAGCAGCAGACCTTCAAGATAGACATTGACCCCGAGGAGACGGTGAAAGCACTGAAAGAGAAGATTGAATCTGAAAAGGGGAAAGATGCCTTTCCAGTAGCAGGTCAAAAATTAATTTATGCAGGCAAAATCCTCAATGATGATACTGCTCTCAAAGAATATAAAATTGATGAGAAAAACTTTGTGGTGGTTATGGTGACCAAACCCAAAGCAGTGTCCACACCAGCACCAGCTACAACTCAGCAGTCAGCTCCTGCCAGCACTACAGCAGTTACTTCCTCCACCACCACAACTGTGGCTCAGGCTCCAACCCCTGTCCCTGCCTTGGCCCCCACTTCCACACCTGCATCCATCACTCCAGCATCAGCGACAGCATCTTCTGAACCTGCACCTGCTAGTGCAGCTAAACAAGAGAAGCCTGCAGAAAAGCCAGCAGAGACACCAGTGGCTACTAGCCCAACAGCAACTGACAGTACATCGGGTGATTCTTCTCGGTCAAACCTTTTTGAAGATGCAACGAGTGCACTTGTGACGGGTCAGTCTTACGAGAATATGGTAACTGAGATCATGTCAATGGGCTATGAACGAGAGCAAGTAATTGCAGCCCTGAGAGCCAGTTTCAACAACCCTGACAGAGCAGTGGAGTATCTTTTAATGGGAATCCCTGGAGATAGAGAAAGTCAGGCTGTGGTTGACCCCCCTCAAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGCAGTGGCTGCAGCTGcagcaactacgacagcaacaactacaacaacaaGTTCTGGAGGACATCCCCTTGAATTTTTACGGAATCAGCCTCAGTTTCAACAGATGAGACAAATTATTCAGCAGAATCCTTCCTTGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCTCAATTACTTCAGCAAATTAGCCAACACCAGGAGCATTTTATTCAGATGTTAAATGAACCAGTTCAAGAAGCTGGTGGTCAaggaggaggaggtggaggtggcagtggaggaATTGCAGAAGCTGGAAGTGGTCATATGAACTACATTCAAGTAACACCTCAGGAAAAAGAAGCTATAGAAAGGTTAAAGGCATTAGGATTTCCTGAAGGACTTGTGATACAAGCGTATTTTGCTTGTGAGAAGAATGAGAATTTGGCTGCCAATTTTCTTCTACAGCAGAACTTTGATGAAGATTGAAAGGGACTTTTTTATATCTCACACTTCACACCAGTGCATTACACTAACTTGTTCACTGGATTGTCTGGGATGACTTGGGCTCATATCCACAATACTTGGTATAAGGTAGTAGATTGTTGGGGGTGGGGAGGGAGGGATCTAGGATACAGGGCAGGGATAAATACAGTGCATGTCTGCTTCAATTAGCAGATGCCGCAACTCCACACAGTGTGTAAAATATATACAACCAAAAATCAGCTTTTGCAGGTCTTTATTTCTTCTGTAAAACAGTAGGTAACTTTTCCTAGGTTTCACTCTTTTTAGTGTACTAGATCCAGAAACTTAGTGTAATGCCCTGCTTTATATTTCTTTGACTTAACATTGGTTTCAGAAAGAATCTTAGCTACCTAGAATTTACAGTCTCTGTTTCATGGCAACACTGGATAATGGCTTTGTGAAATTTAAAAAATTTTTGTAGCGACTGTAAACAGAAATGCCAAATTGATGGTTAATTGTTGCTGCTTCAAAAATAAGTATAAAATTAATATGTAAGGAAGCCCATTCTTTCATGTTAAATACTTGGGGTGGGAGGGGAGAAAGGGAACCTTTTCTTAAAATGAAAATAATTACTGCTATTTTAAAATTTCTTGATCATTGAATGTGAGACCCTTCTAACATGATTTGAGAAGCTGTACAAGTATAGGCAGAGTTATTTTCCTGTTTACATTTTTTTTTTGTTTTGGGGAAAAAATTGGTAGGTGTCTAATTACTGTTTACTTCATTGTTATATTGCAGTAAAAGTTTTAAAACAACCATTGCATGTTTGCTTTTGATGTATCCCTTTGTGAAATTAGCACTTTTGGGGCCAATGGAGAAATGCAGCATTCACTCTCCCTGTCTTTTCCCCTTCCCTCAGCAGAAACGTGTTTATCAGCAAGTCGTGAGTCAAACTGCTGCCTTTTAAAAAACCCACAAAATGCTGATTCAGTTCAAAATTAATGCAAATGTTTCAAAACTGGGTTTCTGATATTTGTAAATGTGTTTCTTTATTAGATAAGAGTGTATTACCATTAAAGTCATTAGTATAATATTGCTTTCAAAAAGAAATGGTAGACAAAACTATAATCCAGCATCTTTTATTGCATTGGAAAGACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGGAAAATATACAATCAAGATATCTCATGGCATATTAAAAGAAAAATCTTAATAGCAGTGTTGGCTTTTATTTGGATTTTTTCATCTCAGTTTTTTCTGTGGAATCTCCTTCATTGGCATTGTTATTTAATCATAAACGGGGCAGATGTCTACTTGTTCAGTTTTTCAAATCTGTTTTCCTGAGTATAAATAAGAGTATTTAAAGAAATAATTTGGATTGCTTTTGTTTTTTGTTTCCTTTTTTTTAACCATCTGATACTAAGAAGATGAATTTGCACAGATTTCTCTGCATAATTTCTCAATATCTTTAGCACAGTATGGTGATGATGACTTTTAAGCATTTACATCACGTACTCATAACCTATTATGAAAATAAATGAAACTggctgggtatggtggctcatgcctataatcccagcactttgggaggccgaggtgggcagatcacttgaggccaggagattgagaccagcctgaccgtcatggcgaaaccccgtctatactaaaaatacaaaaaatagccaggcatggtggcgcacgcctgtggtcccagctacttgggaggctgaggcatgagaattgcttgaacccgggaagtgaaggttgccgtgagctgagatcacaccactgcCATAAACATGACAGGCTTTTGGACTTTGTATTACCTGTATGTTTTATAATGGATCATGCATAATTTCTCAGGAGAATAAAATGAGAATTCATATATACGTTCATCTTTCAAGTCAGAGCAATGAGTTGGGAAAAGAGGTGGCATTTCTGATCGGATAATGGAATACTCTCATTTATTTTATGACATTCTCTGTCTACTCAGATCATAGTGAAAACTGGAAACAAAAAAAAAAAACAGCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATATACTAGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACAGTACCTTGTTTATCTGCTTCTTAAAGAATCAGCCGAGACACCATAAAAGAAATAGGCTTTTTGTGCCTTTTGCTGTTAATGTTTAATTTACAAACTGTTTTGGTAAATCTCTTAATGTAAGTAGCTATTTGACTTTGGAATTTTGCATTCGAGGTATACTGTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAAGCCTAAGTTTGTATTTGTAAATTTCTTATGCCATCCTCTAGTCAAATTTTTTTTCATTGTTTAAAAATACGGAAGTGTTCCAATATAATTTTTTCCTGTACTGGATGGCTAGGATTCTAGAGAATTGATTATAAAATATTTTCAATACA