Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL7
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L7
Also known as L7|humL7-1
Coordinate chr8:73290242-73294466
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L30P family of ribosomal proteins. It contains an N-terminal basic region-leucine zipper (BZIP)-like domain and the RNP consensus submotif RNP2. In vitro the BZIP-like domain mediates homodimerization and stable binding to DNA and RNA, with a preference for 28S rRNA and mRNA. The protein can inhibit cell-free translation of mRNAs, suggesting that it plays a regulatory role in the translation apparatus. It is located in the cytoplasm. The protein has been shown to be an autoantigen in patients with systemic autoimmune diseases, such as systemic lupus erythematosus. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPL7

Retroname Coord Strand Genomic Region ENSG
RPL7P35 chr10:110550045-110550873 - Intergenic
ENSG00000233518 UCSC
RPL7P37 chr10:35697278-35698087 + Intergenic
ENSG00000226646 UCSC
RPL7P34 chr10:88618200-88618829 - Intragenic
ENSG00000237205 UCSC
RPL7P36 chr10:99047622-99048319 + Intragenic
ENSG00000234109 UCSC
RPL7P8 chr1:109651355-109652166 + Intergenic
ENSG00000235045 UCSC
RPL7P40 chr12:17121697-17122479 + Intergenic
ENSG00000242991 UCSC
RPL7P6 chr12:19089130-19089951 + Intergenic
ENSG00000227525 UCSC
RPL7P39 chr12:64867905-64868715 - Intragenic
ENSG00000243020 UCSC
RPL7P43 chr12:76721517-76722332 + Intergenic
ENSG00000241045 UCSC
RPL7P38 chr12:80028876-80029692 + Intergenic
ENSG00000239473 UCSC
RPL7P45 chr13:104814318-104815135 + Intergenic
ENSG00000225823 UCSC
RPL7P44 chr13:76981111-76981932 - Intergenic
ENSG00000233873 UCSC
RPL7P65 chr17:44597100-44597421 + Intergenic
ENSG00000271222 UCSC
RPL7P48 chr17:51502421-51503253 - Intergenic
ENSG00000187504 UCSC
RPL7P49 chr17:76430350-76431144 - Intragenic
ENSG00000242931 UCSC
RPL7P10 chr1:81098194-81099022 - Intergenic
ENSG00000229752 UCSC
RPL7P11 chr1:8750409-8751091 + Intragenic
ENSG00000234619 UCSC
RPL7P50 chr19:6593305-6594120 + Intergenic
ENSG00000268785 UCSC
RPL7P9 chr1:96678807-96679640 - Intergenic
ENSG00000137970 UCSC
RPL7P61 chr2:163152183-163153317 - Intergenic
ENSG00000230282 UCSC
RPL7P52 chr22:40106252-40107086 - Intragenic
ENSG00000228599 UCSC
RPL7P12 chr2:38231547-38232383 + Intergenic
ENSG00000227770 UCSC
RPL7P62 chr2:47139416-47139700 - Intragenic
N/A UCSC
RPL7P13 chr2:49878611-49879434 + Intergenic
ENSG00000234253 UCSC
RPL7P16 chr3:132243529-132244281 - Intragenic
ENSG00000242899 UCSC
RPL7P19 chr5:138473743-138474417 + Intergenic
ENSG00000241458 UCSC
RPL7P1 chr5:150094284-150095111 + Intragenic
ENSG00000214485 UCSC
RPL7P20 chr5:166028498-166029331 - Intergenic
ENSG00000254252 UCSC
RPL7P23 chr5:77582354-77583190 + Intragenic
ENSG00000244363 UCSC
RPL7P24 chr5:80500311-80501468 + Intergenic
ENSG00000240003 UCSC
RPL7P18 chr5:94825889-94826715 - Intragenic
ENSG00000243806 UCSC
RPL7P26 chr6:17530827-17531656 - Intragenic
Intragenic
Intragenic
ENSG00000184612 UCSC
RPL7P25 chr6:34616521-34617324 + Intragenic
ENSG00000216636 UCSC
RPL7P27 chr6:86086356-86087175 - Intergenic
ENSG00000220069 UCSC
RPL7P29 chr6:86970469-86971214 + Intragenic
ENSG00000214457 UCSC
RPL7P60 chr7:100139564-100140690 - Intergenic
ENSG00000214142 UCSC
RPL7P32 chr7:108510212-108511039 + Intragenic
ENSG00000231006 UCSC
RPL7P59 chr7:145039959-145040962 - Intergenic
ENSG00000225918 UCSC
RPL7P33 chr9:15361389-15362204 + Intergenic
ENSG00000215236 UCSC
RPL7P63 chr9:3364306-3364783 - Intragenic
ENSG00000215297 UCSC
RPL7P56 chrX:136791130-136791848 + Intergenic
ENSG00000231164 UCSC
RPL7P58 chrX:26686012-26688017 + Intergenic
ENSG00000216938 UCSC
RPL7P53 chrX:73535486-73536252 + Intergenic
ENSG00000237475 UCSC
RPL7P54 chrX:78763141-78763969 + Intergenic
ENSG00000227645 UCSC
RPL7P41 chr12:52885770-52886409 + Intergenic
ENSG00000241146 UCSC
RPL7P42 chr12:68685902-68686173 + Intergenic
ENSG00000241825 UCSC
RPL7P5 chr15:99551313-99552095 - Intergenic
ENSG00000241562 UCSC
RPL7P47 chr16:17932716-17933345 + Intergenic
ENSG00000228071 UCSC
RPL7P51 chr19:51648883-51649661 + Intergenic
ENSG00000243469 UCSC
RPL7P2 chr20:2075558-2075882 + Intergenic
ENSG00000227663 UCSC
RPL7P66 chr22:47662671-47662814 - Intergenic
ENSG00000232897 UCSC
RPL7P15 chr3:124151894-124153060 - Intragenic
ENSG00000240622 UCSC
RPL7P4 chr6:30696779-30697538 - Intergenic
ENSG00000230449 UCSC
RPL7P31 chr7:34710784-34711283 + Intragenic
ENSG00000235379 UCSC
RPL7P30 chr7:84528085-84528831 - Intergenic
ENSG00000227982 UCSC
RPL7P64 chr9:114695850-114696317 - Intergenic
ENSG00000230284 UCSC
RPL7P55 chrX:93573991-93574626 + Intergenic
ENSG00000228301 UCSC

Expression

Transcript Sequences

>NM_000971.4
CCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGAAGAAGGAGGTTCCTGCTGTGCCAGAAACCCTTAAGAAAAAGCGAAGGAATTTCGCAGAGCTGAAGATCAAGCGCCTGAGAAAGAAGTTTGCCCAAAAGATGCTTCGAAAGGCAAGGAGGAAGCTTATCTATGAAAAAGCAAAGCACTATCACAAGGAATATAGGCAGATGTACAGAACTGAAATTCGAATGGCGAGGATGGCAAGAAAAGCTGGCAACTTCTATGTACCTGCAGAACCCAAATTGGCGTTTGTCATCAGAATCAGAGGTATCAATGGAGTGAGCCCAAAGGTTCGAAAGGTGTTGCAGCTTCTTCGCCTTCGTCAAATCTTCAATGGAACCTTTGTGAAGCTCAACAAGGCTTCGATTAACATGCTGAGGATTGTAGAGCCATATATTGCATGGGGGTACCCCAATCTGAAGTCAGTAAATGAACTAATCTACAAGCGTGGTTATGGCAAAATCAATAAGAAGCGAATTGCTTTGACAGATAACGCTTTGATTGCTCGATCTCTTGGTAAATACGGCATCATCTGCATGGAGGATTTGATTCATGAGATCTATACTGTTGGAAAACGCTTCAAAGAGGCAAATAACTTCCTGTGGCCCTTCAAATTGTCTTCTCCACGAGGTGGAATGAAGAAAAAGACCACCCATTTTGTAGAAGGTGGAGATGCTGGCAACAGGGAGGACCAGATCAACAGGCTTATTAGAAGAATGAACTAAGGTGTCTACCATGATTATTTTTCTAAGCTGGTTGGTTAATAAACAGTACCTGCTCTCAAATTGAAATATAttgttgtatttgtgatttgttgttgttgttgttAGCCTGCCTCTGTCTTCCCTTAACTACTGTGGCAAGTGTGGTGTGTGATAAAATTAAGCCAAATCAACAGCCCATTTCGTGCAAAATCAGGGTCGAGTCTGTGTGAAAGACATCTCTTGGGTTTTTAAAAGGCTTTTCTATACAAAAGATTTTAATTTTTTGTTTTTTAACTGTGCTGAGTGATTCGAAATGGGTTTATTCTAAGAAAGCCTGTTTCACAAGCATTTGTACATGATTTGTCGGTAAGGTAATCCAACTTTGGTTTATGGAAAAAATTGAATTTAGTTGCTAAAATTTATTTCTCGGGCCTTCGCTTGTTTATAAACTGCCATGTAAATGTGTTGTTTTCCTTTTGCATTCCA
>NM_001363737.2
AGCCGTCCGCGGAGCCGAGCCGGGTAGCCCCTCTCACACGGCCGTGGCCGCAACCTCAGCCCTCCTCGCACCTCCCTTCGCAGCTCACGCCCCCTCCCGTGGGGTGTCCTGGCCTCCGCCTGCCGAGCTCGGCAGTCAGCAGAGCCCCGGCCATCCTCCTCCGGCCGTCCGGTCCCCACTGGTCCCTGGCTAGCCACTTTTCGTAAGCTAGAGCACTCCAGACCGCCCCGCCTGCGATCAGGCGCTGCGGAAGACAGCCCTGTGGGCTGGAGCGACGACAAGGACCTCGCGGAGCGGCGAAAGGGGTGTAGTCTGCGACTACCGCGGCAGGGAGCCGGGAGGGCGGCCAAAAGTGACTTCGAATTGCAGCTAGCCGTTTGGAACGTGGCCCAAGAGGCTCTCATTTTCCTGGCTGGAACCGTCGCCGCGGTGCTTGCCTGCGGTCCTGGTCAGCCGTTGCCCTCCCGCCGGGCGGGCGAAGACTGGTGCATGCTGGGATTTGTAGTTCGTCCCCATGAGGCTCGTCCTGGGAACATTATGGGGAGGAACGGAGCCTAATCCTGTCAGCGCAGCCTGGGGATTAGGACCCGGAGTTGCCAAGAGAGAAGAAGAAGGAGGTTCCTGCTGTGCCAGAAACCCTTAAGAAAAAGCGAAGGAATTTCGCAGAGCTGAAGATCAAGCGCCTGAGAAAGAAGTTTGCCCAAAAGATGCTTCGAAAGGCAAGGAGGAAGCTTATCTATGAAAAAGCAAAGCACTATCACAAGGAATATAGGCAGATGTACAGAACTGAAATTCGAATGGCGAGGATGGCAAGAAAAGCTGGCAACTTCTATGTACCTGCAGAACCCAAATTGGCGTTTGTCATCAGAATCAGAGGTATCAATGGAGTGAGCCCAAAGGTTCGAAAGGTGTTGCAGCTTCTTCGCCTTCGTCAAATCTTCAATGGAACCTTTGTGAAGCTCAACAAGGCTTCGATTAACATGCTGAGGATTGTAGAGCCATATATTGCATGGGGGTACCCCAATCTGAAGTCAGTAAATGAACTAATCTACAAGCGTGGTTATGGCAAAATCAATAAGAAGCGAATTGCTTTGACAGATAACGCTTTGATTGCTCGATCTCTTGGTAAATACGGCATCATCTGCATGGAGGATTTGATTCATGAGATCTATACTGTTGGAAAACGCTTCAAAGAGGCAAATAACTTCCTGTGGCCCTTCAAATTGTCTTCTCCACGAGGTGGAATGAAGAAAAAGACCACCCATTTTGTAGAAGGTGGAGATGCTGGCAACAGGGAGGACCAGATCAACAGGCTTATTAGAAGAATGAACTAAGGTGTCTACCATGATTATTTTTCTAAGCTGGTTGGTTAATAAACAGTACCTGCTCTCAAATTGAAATATAttgttgtatttgtgatttgttgttgttgttgttAGCCTGCCTCTGTCTTCCCTTAACTACTGTGGCAAGTGTGGTGTGTGATAAAATTAAGCCAAATCAACAGCCCATTTCGTGCAAAATCAGGGTCGAGTCTGTGTGAAAGACATCTCTTGGGTTTTTAAAAGGCTTTTCTATACAAAAGATTTTAATTTTTTGTTTTTTAACTGTGCTGAGTGATTCGAAATGGGTTTATTCTAAGAAAGCCTGTTTCACAAGCATTTGTACATGATTTGTCGGTAAGGTAATCCAACTTTGGTTTATGGAAAAAATTGAATTTAGTTGCTAAAATTTATTTCTCGGGCCTTCGCTTGTTTATAAACTGCCATGTAAATGTGTTGTTTTCCTTTTGCATTCCA