Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL18
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L18
Also known as DBA18|L18
Coordinate chr19:48615331-48619178
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a member of the L18E family of ribosomal proteins that is a component of the 60S subunit. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jul 2012]

Retrocopy(s) from RPL18

Retroname Coord Strand Genomic Region ENSG
RPL18P19 chr11:39161446-39161970 + Intergenic
ENSG00000240975 UCSC
RPL18P20 chr12:4109710-4110202 - Intergenic
ENSG00000242444 UCSC
RPL18P10 chr13:50099300-50099907 + Intergenic
ENSG00000214359 UCSC
RPL18P21 chr14:64535665-64535882 - Intergenic
ENSG00000259160 UCSC
RPL18P11 chr15:78661007-78661641 - Intergenic
ENSG00000213307 UCSC
RPL18P22 chr16:3496166-3496775 + Intergenic
ENSG00000240311 UCSC
RPL18P13 chr16:76235021-76235658 - Intergenic
ENSG00000244485 UCSC
RPL18P14 chr5:121616236-121616846 + Intergenic
ENSG00000213661 UCSC
RPL18P16 chr7:137164034-137164636 + Intergenic
ENSG00000224469 UCSC
RPL18P17 chr8:109899246-109899787 - Intergenic
ENSG00000241385 UCSC
RPL18P18 chr8:113376633-113377007 + Intergenic
ENSG00000227514 UCSC
RPL18P15 chr7:121440820-121441257 - Intergenic
ENSG00000234985 UCSC

Expression

Transcript Sequences

>NM_000979.4
CTCTTTCCGGACCTGGCCGAGCAGGAGGCGCCATCATGGGAGTGGACATCCGCCATAACAAGGACCGAAAGGTTCGGCGCAAGGAGCCCAAGAGCCAGGATATCTACCTGAGGCTGTTGGTCAAGTTATACAGGTTTCTGGCCAGAAGAACCAACTCCACATTCAACCAGGTTGTGTTGAAGAGGTTGTTTATGAGTCGCACCAACCGGCCGCCTCTGTCCCTTTCCCGGATGATCCGGAAGATGAAGCTTCCTGGCCGGGAAAACAAGACGGCCGTGGTTGTGGGGACCATAACTGATGATGTGCGGGTTCAGGAGGTACCCAAACTGAAGGTATGTGCACTGCGCGTGACCAGCCGGGCCCGCAGCCGCATCCTCAGGGCAGGGGGCAAGATCCTCACTTTCGACCAGCTGGCCCTGGACTCCCCTAAGGGCTGTGGCACTGTCCTGCTCTCCGGTCCTCGCAAGGGCCGAGAGGTGTACCGGCATTTCGGCAAGGCCCCAGGAACCCCGCACAGCCACACCAAACCCTACGTCCGCTCCAAGGGCCGGAAGTTCGAGCGTGCCAGAGGCCGACGGGCCAGCCGAGGCTACAAAAACTAACCCTGGATCCTACTCTCTTATTAAAAAGATTTTTGCTGACA
>NM_001270490.2
CTCTTTCCGGACCTGGCCGAGCAGGAGGCGCCATCATGTTATACAGGTTTCTGGCCAGAAGAACCAACTCCACATTCAACCAGGTTGTGTTGAAGAGGTTGTTTATGAGTCGCACCAACCGGCCGCCTCTGTCCCTTTCCCGGATGATCCGGAAGATGAAGCTTCCTGGCCGGGAAAACAAGACGGCCGTGGTTGTGGGGACCATAACTGATGATGTGCGGGTTCAGGAGGTACCCAAACTGAAGGTATGTGCACTGCGCGTGACCAGCCGGGCCCGCAGCCGCATCCTCAGGGCAGGGGGCAAGATCCTCACTTTCGACCAGCTGGCCCTGGACTCCCCTAAGGGCTGTGGCACTGTCCTGCTCTCCGGTCCTCGCAAGGGCCGAGAGGTGTACCGGCATTTCGGCAAGGCCCCAGGAACCCCGCACAGCCACACCAAACCCTACGTCCGCTCCAAGGGCCGGAAGTTCGAGCGTGCCAGAGGCCGACGGGCCAGCCGAGGCTACAAAAACTAACCCTGGATCCTACTCTCTTATTAAAAAGATTTTTGCTGACA