Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL22
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L22
Also known as EAP|HBP15|HBP15/L22|L22
Coordinate chr1:6185020-6199595
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a cytoplasmic ribosomal protein that is a component of the 60S subunit. The protein belongs to the L22E family of ribosomal proteins. Its initiating methionine residue is post-translationally removed. The protein can bind specifically to Epstein-Barr virus-encoded RNAs (EBERs) 1 and 2. The mouse protein has been shown to be capable of binding to heparin. Transcript variants utilizing alternative polyA signals exist. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. It was previously thought that this gene mapped to 3q26 and that it was fused to the acute myeloid leukemia 1 (AML1) gene located at 21q22 in some therapy-related myelodysplastic syndrome patients with 3;21 translocations; however, these fusions actually involve a ribosomal protein L22 pseudogene located at 3q26, and this gene actually maps to 1p36.3-p36.2. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPL22

Retroname Coord Strand Genomic Region ENSG
RPL22P17 chr10:102887785-102888216 - Intragenic
ENSG00000235266 UCSC
RPL22P18 chr10:80125927-80126374 + Intergenic
ENSG00000230171 UCSC
RPL22P6 chr1:121141991-121142451 - Intergenic
ENSG00000268993 UCSC
RPL22P5 chr1:143929935-143930389 - Intergenic
ENSG00000268074 UCSC
RPL22P26 chr11:46053651-46053857 - Intragenic
N/A UCSC
RPL22P3 chr1:16369092-16369543 - Intragenic
ENSG00000226457 UCSC
RPL22P24 chr1:185169788-185171700 - Intergenic
ENSG00000231084 UCSC
RPL22P4 chr1:206160829-206161289 - Intergenic
ENSG00000225483 UCSC
RPL22P19 chr12:124935467-124935878 - Intergenic
ENSG00000241129 UCSC
RPL22P20 chr14:18692018-18692465 + Intergenic
ENSG00000239200 UCSC
RPL22P2 chr14:76886380-76886772 - Intergenic
ENSG00000241081 UCSC
RPL22P21 chr17:16084105-16084441 + Intragenic
ENSG00000233979 UCSC
RPL22P10 chr2:106247379-106248803 + Intergenic
ENSG00000213295 UCSC
RPL22P8 chr2:107914896-107916346 + Intergenic
ENSG00000237745 UCSC
RPL22P11 chr2:109736390-109737507 - Intergenic
ENSG00000233707 UCSC
RPL22P12 chr2:110633933-110634615 + Intergenic
ENSG00000216867 UCSC
RPL22P7 chr2:129939791-129940230 - Intergenic
ENSG00000234559 UCSC
RPL22P25 chr2:152539223-152539381 - Intragenic
ENSG00000270776 UCSC
RPL22P1 chr3:169483218-169484020 - Intragenic
ENSG00000213178 UCSC
RPL22P14 chr6:89876553-89876932 + Intergenic
ENSG00000218300 UCSC
RPL22P16 chr7:4865377-4865824 - Intragenic
ENSG00000213935 UCSC
RPL22P23 chrX:136947692-136948096 - Intergenic
ENSG00000232379 UCSC
RPL22P22 chrX:82505875-82506825 - Intergenic
ENSG00000213653 UCSC

Expression

Transcript Sequences

>NM_000983.4
CCTTTCTAACTCCGCTGCCGCCATGGCTCCTGTGAAAAAGCTTGTGGTGAAGGGGGGCAAAAAAAAGAAGCAAGTTCTGAAGTTCACTCTTGATTGCACCCACCCTGTAGAAGATGGAATCATGGATGCTGCCAATTTTGAGCAGTTTTTGCAAGAAAGGATCAAAGTGAACGGAAAAGCTGGGAACCTTGGTGGAGGGGTGGTGACCATCGAAAGGAGCAAGAGCAAGATCACCGTGACATCCGAGGTGCCTTTCTCCAAAAGGTATTTGAAATATCTCACCAAAAAATATTTGAAGAAGAATAATCTACGTGACTGGTTGCGCGTAGTTGCTAACAGCAAAGAGAGTTACGAATTACGTTACTTCCAGATTAACCAGGACGAAGAAGAGGAGGAAGACGAGGATTAAATTTCATTTATCTGGAAAATTTTGTATGAGTTCTTGAATAAAACTTGGGAACCAAAATGGTGGTTTATCCTTGTATCTCTGCAGTGTGGATTGAACAGAAAATTGGAAATCATAGTCAAAGGGCTTCCCTTGGTTCGCCACTCATTTATTTGTAACTTGACTTCTTTTTTTTTCTGCTTAAAAATTTCAATTCTCGTGGTAATACCAGAGTAGAAGGAGAGGGTGACTTTACCGAACTGACAGCCATTGGGGAGGCAGATGCGGGTGTGGAGGTGTGGGCTGAAGGTAGTGACTGTTTGATTTTAAAAAGTGTGACTGTCAGTTGTATCTGTTGCTTTTCTCAATGATTCAGGGATACAAATGGGCTTCTCTCATTCATTAAAAGAAAACGCGACATCTTTCTAAGATTCTCTGTGGGAAAATGACTGTCAATAAAATGCGGGTTTCTGGGCCATTCGTCTTACTTTCATTTTTTGATTACAAATTTCTCTTGACGCACACAATTATGTCTGCTAATCCTCTTCTTCCTAGAGAGAGAAACTGTGCTCCTTCAGTGTTGCTGCCATAAAGGGGTTTGGGGAATCGATTGTAAAAGTCCCAGGTTCTAAATTAACTAAATGTGTACAGAAATGAACGTGTAAGTAATGTTTCTACAGGTCTTTGCAACAAACTGTCACTTTCGTCTCCAGCAGAGGGAGCTGTAGGAATAGTGCTTCCAGATGTGGTCTCCCGTGTGGGGCCCAGCAATGGGGGCCCCTGATGCCAAGAGCTCTGGAGGTTCTTGAAAGAGGGGACACGAAGGAGGAGTGACTGGGAAGCCTCCCATGCCAAGGAGGTGGGAGGTGCCCTGGAAATAGCTGCCTCATGCCACTTAGGCCATGACTGGATTTAATGTCAGTGGTGTGCCACAGTGCAGAGGCTAGACAACTGAAAGGGGCTACCAAGGCTGGGAAAAAAATGCAATTGTTGCTGTGAGTGACTTTGAAAGACTCTGGTGCCTTGTGGTGCCCTTCTGAAATTCAAACAGTAATGCAAAAGTGTCTGCATTAGAATTTACGGTGTCTAAAATTCATGTTTTTAAAAGAGCTTGCCTACAGATGGTTTCCACACTTGAAATTGTGCCCTGCGAGTTGCATAGCTGGAAGTTCAATGCTCAGTCCTACCTTGGCTCCCATTAAACATTTGGTGCTCTGTGGATTGAGTTGAACGTGTTGAGGCTTTGCAATTTCACTTGTGTTAAAGGCTCTGGCATTTTTCCATTTCTATGCAAATTTCTTTGAAGCAGAATTGCTTGCATATTTCTTCTCTGCCGTCACAGAAAGCAGAGTTTCTTTCAAACTTCACTGAGGCATCAGTTGCTCTTTGGCAATGTCCCTTAACCATGATTATTAACTAAGTTTGTGGCTTGAGTTTACAAATTCTACTTGTTGCATTGATGTTCCCATGTAGTAAGTCATTTTTAGTTTGGTTGTGAAAAAACCCTGGGCTGAAGTTGGCATTTCAGTTAAAAGAAAAAAAGAAACTAGTCCCAGATTTGAAAACTTGTAATAAAATTGAAACTCACTGGTTTTCTATGTCTTTTTGAACTCTTGTAATCGAGTTTTGATCATATTTTCTATTAAAGTGGCTAACACCTGGCTACTCTTACTGTA