Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL23A
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L23a
Also known as L23A|MDA20
Coordinate chr17:28719985-28724359
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L23P family of ribosomal proteins. It is located in the cytoplasm. The protein may be one of the target molecules involved in mediating growth inhibition by interferon. In yeast, the corresponding protein binds to a specific site on the 26S rRNA. This gene is co-transcribed with the U42A, U42B, U101A, and U101B small nucleolar RNA genes, which are located in its third, first, second, and fourth introns, respectively. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPL23A

Retroname Coord Strand Genomic Region ENSG
RPL23AP58 chr10:102572719-102573244 - Intragenic
ENSG00000228657 UCSC
RPL23AP59 chr10:106550086-106550481 + Intergenic
ENSG00000215002 UCSC
RPL23AP60 chr10:133778231-133778741 + Intergenic
ENSG00000213147 UCSC
RPL23AP61 chr10:46063236-46063749 + Intergenic
ENSG00000280012 UCSC
RPL23AP90 chr1:100196821-100197083 + Intragenic
ENSG00000271415 UCSC
RPL23AP62 chr11:112461436-112461771 - Intergenic
ENSG00000213233 UCSC
RPL23AP64 chr11:119002974-119003459 - Intragenic
ENSG00000240970 UCSC
RPL23AP89 chr1:12080249-12080546 - Intragenic
ENSG00000227875 UCSC
RPL23AP63 chr11:43718663-43719616 + Intragenic
ENSG00000243721 UCSC
RPL23AP22 chr1:193756813-193757277 - Intergenic
ENSG00000237213 UCSC
RPL23AP65 chr11:9606129-9606662 + Intergenic
ENSG00000243964 UCSC
RPL23AP16 chr1:199371980-199372285 + Intergenic
ENSG00000228190 UCSC
RPL23AP18 chr1:212309002-212309529 - Intragenic
ENSG00000225338 UCSC
RPL23AP66 chr12:12339055-12339250 + Intragenic
ENSG00000243141 UCSC
RPL23AP67 chr12:133125468-133125981 + Intragenic
ENSG00000240991 UCSC
RPL23AP14 chr12:2781893-2782408 + Intergenic
ENSG00000224438 UCSC
RPL23AP15 chr1:228449129-228449631 - Intergenic
ENSG00000230841 UCSC
RPL23AP23 chr1:235296036-235296356 + Intragenic
ENSG00000236863 UCSC
RPL23AP20 chr1:241916071-241916411 + Intergenic
ENSG00000235990 UCSC
RPL23AP25 chr1:248936570-248937081 + Intergenic
ENSG00000233084 UCSC
RPL23AP99 chr1:258528-259036 - Intergenic
ENSG00000228463 UCSC
RPL23AP68 chr12:87169985-87170410 - Intergenic
ENSG00000242850 UCSC
RPL23AP97 chr13:114346155-114346668 + Intergenic
ENSG00000260615 UCSC
RPL23AP69 chr13:25206187-25206525 + Intergenic
ENSG00000235315 UCSC
RPL23AP11 chr14:102662202-102662721 - Intragenic
ENSG00000230988 UCSC
RPL23AP17 chr1:41098836-41099168 + Intragenic
ENSG00000215893 UCSC
RPL23AP71 chr14:34485965-34486476 + Intergenic
ENSG00000237450 UCSC
RPL23AP10 chr14:96456553-96457002 - Intragenic
ENSG00000240051 UCSC
RPL23AP85 chr1:56585582-56585799 - Intergenic
ENSG00000224980 UCSC
RPL23AP86 chr16:2922620-2923010 - Intragenic
ENSG00000262959 UCSC
RPL23AP105 chr16:386750-387288 + Intergenic
ENSG00000236829 UCSC
RPL23AP91 chr16:57321335-57322152 + Intergenic
ENSG00000260965 UCSC
RPL23AP75 chr17:40439429-40439867 - Intergenic
ENSG00000240125 UCSC
RPL23AP74 chr17:61069854-61070384 + Intragenic
ENSG00000227694 UCSC
RPL23AP73 chr17:6749702-6750225 + Intergenic
ENSG00000244283 UCSC
RPL23AP87 chr17:83239912-83240423 + Intergenic
ENSG00000232938 UCSC
RPL23AP77 chr18:23709797-23710298 - Intragenic
Intragenic
ENSG00000267301 UCSC
RPL23AP19 chr1:8831112-8831401 + Intergenic
ENSG00000229716 UCSC
RPL23AP2 chr19:15611640-15612600 + Intergenic
ENSG00000225067 UCSC
RPL23AP80 chr19:47794558-47794913 - Intergenic
ENSG00000213035 UCSC
CENPBD2P chr19:58598955-58599466 + Intergenic
ENSG00000213753 UCSC
RPL23AP78 chr19:8728697-8729217 - Intergenic
ENSG00000269244 UCSC
RPL23AP6 chr20:10349125-10349480 - Intergenic
ENSG00000214835 UCSC
RPL23AP81 chr20:41196690-41197199 + Intragenic
ENSG00000242748 UCSC
RPL23AP27 chr2:104678450-104678704 + Intergenic
ENSG00000225669 UCSC
RPL23AP7 chr2:113611747-113612258 - Intergenic
ENSG00000240356 UCSC
RPL23AP3 chr21:36016041-36016557 - Intergenic
ENSG00000214914 UCSC
RPL23AP12 chr21:39127554-39128076 + Intergenic
ENSG00000228861 UCSC
RPL23AP4 chr21:46690749-46691257 + Intergenic
ENSG00000212932 UCSC
RPL23AP29 chr2:153370792-153371081 + Intergenic
ENSG00000214024 UCSC
RPL23AP33 chr2:184902094-184902456 - Intragenic
ENSG00000237824 UCSC
RPL23AP35 chr2:186261374-186261755 - Intergenic
ENSG00000232568 UCSC
RPL23AP30 chr2:201066825-201067226 + Intragenic
ENSG00000226658 UCSC
RPL23AP31 chr2:218841585-218842119 + Intergenic
ENSG00000232625 UCSC
RPL23AP28 chr2:222044485-222045008 - Intergenic
ENSG00000226331 UCSC
RPL23AP26 chr2:231585852-231586326 + Intergenic
ENSG00000228884 UCSC
RPL23AP88 chr2:242175157-242175667 + Intergenic
ENSG00000271153 UCSC
RPL23AP82 chr22:50798643-50799154 + Intergenic
ENSG00000184319 UCSC
RPL23AP34 chr2:28308186-28308570 + Intragenic
ENSG00000225991 UCSC
RPL23AP32 chr2:54529328-54529841 + Intragenic
ENSG00000237887 UCSC
RPL23AP37 chr2:64347229-64347749 - Intergenic
ENSG00000236148 UCSC
RPL23AP92 chr2:69873528-69873777 - Intragenic
ENSG00000270723 UCSC
RPL23AP41 chr3:140902178-140902688 + Intergenic
ENSG00000224085 UCSC
RPL23AP38 chr3:1595381-1596257 - Intergenic
ENSG00000184423 UCSC
RPL23AP42 chr3:161429071-161429612 - Intergenic
ENSG00000234851 UCSC
RPL23AP93 chr3:194562928-194563096 - Intergenic
ENSG00000232873 UCSC
RPL23AP43 chr3:32785633-32786169 + Intergenic
ENSG00000227337 UCSC
RPL23AP49 chr3:75624654-75625164 - Intergenic
ENSG00000243422 UCSC
RPL23AP94 chr4:112530369-112530531 - Intergenic
ENSG00000248439 UCSC
RPL23AP84 chr4:190195711-190196221 + Intergenic
ENSG00000261914 UCSC
RPL23AP44 chr5:121575812-121576337 - Intergenic
ENSG00000244088 UCSC
RPL23AP45 chr5:181471951-181472461 + Intergenic
ENSG00000213285 UCSC
RPL23AP50 chr6:107931997-107932275 + Intragenic
ENSG00000232778 UCSC
RPL23AP48 chr6:121680045-121680324 - Intergenic
ENSG00000219135 UCSC
RPL23AP46 chr6:132997096-132998045 - Intergenic
ENSG00000213122 UCSC
RPL23AP47 chr6:170745506-170745979 + Intergenic
ENSG00000219814 UCSC
RPL23AP1 chr6:29726631-29727154 - Intergenic
ENSG00000239257 UCSC
RPL23AP95 chr7:103152063-103152343 - Intergenic
ENSG00000236848 UCSC
RPL23AP52 chr7:11006367-11006878 - Intragenic
ENSG00000230370 UCSC
RPL23AP102 chr7:7742103-7742441 - Intragenic
ENSG00000234718 UCSC
RPL23AP53 chr8:213215-213721 - Intergenic
ENSG00000223508 UCSC
RPL23AP55 chr8:23206907-23207406 + Intragenic
ENSG00000243265 UCSC
RPL23AP54 chr8:5476680-5477003 + Intergenic
ENSG00000240486 UCSC
RPL23AP96 chr8:6898876-6899480 - Intergenic
ENSG00000250752 UCSC
RPL23AP57 chr9:6639130-6639648 + Intragenic
ENSG00000206147 UCSC
RPL23AP83 chrX:56242913-56243412 - Intragenic
ENSG00000234135 UCSC

Expression

Transcript Sequences

>NM_000984.6
ATTGGAGACCCTTTTCACAAGATGGCGCCGAAAGCGAAGAAGGAAGCTCCTGCCCCTCCTAAAGCTGAAGCCAAAGCGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCACAGCCACAAAAAGAAGAAGATCCGCACGTCACCCACCTTCCGGCGGCCGAAGACACTGCGACTCCGGAGACAGCCCAAATATCCTCGGAAGAGCGCTCCCAGGAGAAACAAGCTTGACCACTATGCTATCATCAAGTTTCCGCTGACCACTGAGTCTGCCATGAAGAAGATAGAAGACAACAACACACTTGTGTTCATTGTGGATGTTAAAGCCAACAAGCACCAGATTAAACAGGCTGTGAAGAAGCTGTATGACATTGATGTGGCCAAGGTCAACACCCTGATTCGGCCTGATGGAGAGAAGAAGGCATATGTTCGACTGGCTCCTGATTACGATGCTTTGGATGTTGCCAACAAAATTGGGATCATCTAAACTGAGTCCAGCTGCCTAATTCTGAatatatatatatatatatCTTTTCACCATATACATGCCTGTCTGTCAATTTCTGGTTGGGCTGGGAGGCCACACACACACACTGACATGACAGGGCTTGGGCAAGACTCCTGTTCTACTTATCCTTTTGAAATACCTCACCCTGCCACTCCACCATGTATGATCATTCCAGAGATCTTTGTGACTAGAGTTAGTGTCCTAGGAAAACCAGAACTCAGAACTTGCCTCCATGGTTGAGTAACAAGCTGTACAAGAACCCCTTTTATCCCTGGAAGAGGCTGTGTATGAAACCAATGCCCAGGGTTTGAAGGGTGTTAGCATCCATTTCAGGGGAGTGTGGATTGGCTGGCTCTCTGGTAGCATTTTGTCCTCACACACCCATCTACTATGTCCAACCGGTCTGTCTGCTTCCCTCACCCCTTGCCCAATAAAGGACAAGGACTTCAGAGGAGTA