Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL27
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L27
Also known as DBA16|L27
Coordinate chr17:42998273-43002959
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of four RNA species and approximately 80 structurally distinct proteins. This gene encodes a member of the L27e family of ribosomal proteins and a component of the 60S subunit. A splice site mutation in this gene has been identified in a Diamond-Blackfan anemia (DBA) patient. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Mar 2017]

Retrocopy(s) from RPL27

Retroname Coord Strand Genomic Region ENSG
RPL27P14 chr1:28982363-28982644 - Intragenic
ENSG00000225616 UCSC
RPL27P13 chr1:8798530-8799509 + Intragenic
ENSG00000226545 UCSC
RPL27P7 chr2:119993172-119993626 - Intergenic
ENSG00000233741 UCSC
RPL27P5 chr2:63108097-63108443 - Intergenic
ENSG00000232403 UCSC
RPL27P6 chr2:63684270-63684742 + Intergenic
ENSG00000234488 UCSC
RPL27P17 chr3:58511267-58511676 + Intragenic
ENSG00000236722 UCSC
RPL27P18 chr5:32221896-32222386 + Intergenic
ENSG00000230829 UCSC
RPL27P19 chr7:131242554-131243041 + Intragenic
ENSG00000233287 UCSC
RPL27P21 chrX:53113014-53113282 - Intergenic
ENSG00000235224 UCSC
RPL27P12 chr12:123721362-123721643 - Intragenic
ENSG00000239215 UCSC
RPL27P20 chr14:30819714-30819902 + Intergenic
ENSG00000240513 UCSC
RPL27P16 chr2:206922700-206922955 + Intragenic
Intragenic
N/A UCSC
RPL27P15 chr1:159759230-159759615 + Intergenic
ENSG00000235226 UCSC
RPL27P8 chr2:206040496-206040871 + Intragenic
ENSG00000237041 UCSC

Expression

Transcript Sequences

>NM_000988.5
AGCGGAAGTGTCCTTCTTTCCTTTTTGCTGGTAGGGCCGGGTGGTTGCTGCCGAAATGGGCAAGTTCATGAAACCTGGGAAGGTGGTGCTTGTCCTGGCTGGACGCTACTCCGGACGCAAAGCTGTCATCGTGAAGAACATTGATGATGGCACCTCAGATCGCCCCTACAGCCATGCTCTGGTGGCTGGAATTGACCGCTACCCCCGCAAAGTGACAGCTGCCATGGGCAAGAAGAAGATCGCCAAGAGATCAAAGATAAAATCTTTTGTGAAAGTGTATAACTACAATCACCTAATGCCCACAAGGTACTCTGTGGATATCCCCTTGGACAAAACTGTCGTCAATAAGGATGTCTTCAGAGATCCTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAAGAGAGATACAAGACAGGCAAGAACAAGTGGTTCTTCCAGAAACTGCGGTTTTAGATGCTTTGTTTTGATCATTAAAAATTATAAAGAAAAAAA
>NM_001349921.2
ATTCGAATACTTGAGCTGCCGCGCCCTGCGTTTCCCTCATGAGCTTCTTCCGCCCGCAACACGAGACTCAGCACCACACAATCAGCGTGGCAAAGCCTGAAGGGCGGGACAGGAAGTGAGGTCACTCCTCACCGGGGTGAAAGAAATGGGCAAGTTCATGAAACCTGGGAAGGTGGTGCTTGTCCTGGCTGGACGCTACTCCGGACGCAAAGCTGTCATCGTGAAGAACATTGATGATGGCACCTCAGATCGCCCCTACAGCCATGCTCTGGTGGCTGGAATTGACCGCTACCCCCGCAAAGTGACAGCTGCCATGGGCAAGAAGAAGATCGCCAAGAGATCAAAGATAAAATCTTTTGTGAAAGTGTATAACTACAATCACCTAATGCCCACAAGGTACTCTGTGGATATCCCCTTGGACAAAACTGTCGTCAATAAGGATGTCTTCAGAGATCCTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAAGAGAGATACAAGACAGGCAAGAACAAGTGGTTCTTCCAGAAACTGCGGTTTTAGATGCTTTGTTTTGATCATTAAAAATTATAAAGAAAAAAA
>NM_001349922.2
AGCGGAAGTGTCCTTCTTTCCTTTTTGCTGGTAGGGCCGGGTGGTTGCTGCCGGTAAGTAGAAGCTTGGGTTGAATCTTTCAATCCGCTGCCATCCGCGGCTTGGGGGTCGAAGGTCCGGGCGGCGCCGGGTGCATTCCTTCCCTAGGTCTCTGGCGGCTACGTATCCGATCCTGTCCTGCGAGCAGGGCCCTCGGGCGGCCTTGACCAAGGCGACAGTGAACACAGTCTGAAGTTCCGGCCCAAGACCTGGGCTTGCTGGCAGGAGTCAGCTCTGGGCATCTTTGGCTTTACGGATTTTTAAGTGGCCCTTTCTCCTTGCTCTCTGCAGAAATGGGCAAGTTCATGAAACCTGGGAAGGTGGTGCTTGTCCTGGCTGGACGCTACTCCGGACGCAAAGCTGTCATCGTGAAGAACATTGATGATGGCACCTCAGATCGCCCCTACAGCCATGCTCTGGTGGCTGGAATTGACCGCTACCCCCGCAAAGTGACAGCTGCCATGGGCAAGAAGAAGATCGCCAAGAGATCAAAGATAAAATCTTTTGTGAAAGTGTATAACTACAATCACCTAATGCCCACAAGGTACTCTGTGGATATCCCCTTGGACAAAACTGTCGTCAATAAGGATGTCTTCAGAGATCCTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAAGAGAGATACAAGACAGGCAAGAACAAGTGGTTCTTCCAGAAACTGCGGTTTTAGATGCTTTGTTTTGATCATTAAAAATTATAAAGAAAAAAA