Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL28
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L28
Also known as L28
Coordinate chr19:55385932-55403342
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L28E family of ribosomal proteins. It is located in the cytoplasm. Variable expression of this gene in colorectal cancers compared to adjacent normal tissues has been observed, although no correlation between the level of expression and the severity of the disease has been found. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Alternative splicing results in multiple transcript variants encoding distinct isoforms.[provided by RefSeq, Oct 2008]

Retrocopy(s) from RPL28

Retroname Coord Strand Genomic Region ENSG
RPL28P3 chr12:104273052-104273757 + Intragenic
N/A UCSC
RPL28P4 chr15:58200733-58201024 + Intergenic
ENSG00000240934 UCSC
RPL28P5 chr19:12260091-12260582 + Intergenic
ENSG00000213293 UCSC
RPL28P6 chr22:19055806-19056551 + Intragenic
ENSG00000237347 UCSC
RPL28P1 chr3:170653806-170654271 - Intergenic
ENSG00000213174 UCSC
RPL28P2 chr5:124808783-124809255 - Intergenic
ENSG00000242814 UCSC

Expression

Transcript Sequences

>NM_000991.5
CTCTTTCCGTCTCAGGTCGCCGCTGCGAAGGGAGCCGCCGCCATGTCTGCGCATCTGCAATGGATGGTCGTGCGGAACTGCTCCAGTTTCCTGATCAAGAGGAATAAGCAGACCTACAGCACTGAGCCCAATAACTTGAAGGCCCGCAATTCCTTCCGCTACAACGGACTGATTCACCGCAAGACTGTGGGCGTGGAGCCGGCAGCCGACGGCAAAGGTGTCGTGGTGGTCATTAAGCGGAGATCCGGCCAGCGGAAGCCTGCCACCTCCTATGTGCGGACCACCATCAACAAGAATGCTCGCGCCACGCTCAGCAGCATCAGACACATGATCCGCAAGAACAAGTACCGCCCCGACCTGCGCATGGCAGCCATCCGCAGGGCCAGCGCCATCCTGCGCAGCCAGAAGCCTGTGATGGTGAAGAGGAAGCGGACCCGCCCCACCAAGAGCTCCTGAGCCCCCTGCCCCCAGAGCAATAAAGTCAGCTGGCTTTCTCACCTGCCTCGACTGGGCCTCCCTTTTTGAAACGCTCTGGGGAGCTCTGGCCCTGTGTGTTGTCATTCAGGCCATGTCATCAAAACTCTGCATGTCACCTTGTCCATCTGGAGGTGATGTCAATGGCTGGCCATGCAGGAGGGGTGGGGTAGCTGCCTTGTCCCTGGTGAGGGCAAGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGGCTTCCATTCAGAAGAAGAAAGGCCTTTTCTAGCCCAGAAGGGTGCAGGCTGAGGGCTGGGCCCTGGGCCCTGGTGCTGTAGCACGGTTTGGGGACTTGGGGTGTTCCCAAGACCTGGGGGACGACAGACATCACGGGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAGATGGGCAACTTGGTGGGTGGTGGCTTATAACTGTAAGGGAGATGGCAGCCCCAGGGTACAGCCAGCAGGCATTGAGCAGCCTTAGCATTGTCCCCCTACTCCCGTCCTCCAGGTGTCCCCATCCCTCCCCTGTCTCTTTGAGCTGGCTCTTGTCACTTAGGTCTCATCTCAGTGGCCGCTCCTGGGCCACCCTGTCACCCAAGCTTTCCTGATTGCCCAGCCCTCTTGTTTCCTTTGGCCTGTTTGCTCCCTAGTGTTTATTACAGCTTGtgaggccaggagtttgagaccatcctaggcaacataatgagacaccgtctctaaaataaaattagctgggtgtggtggtgcaccgcctgtggtcccagctcctcagaggttgagtagaggctgaggtgagcggagcacttgagccaagagtatgaggctgcagtgagcccatgagccccaccactacactccagcctggaagacaCCATGACACACAGTGAGGCCTGGATGGGGAAAGAGTCCTGCTGTTGATCCTcacatgtttcctgggcacctaactctgtcagccactgccagggaccaaggatccagcatccatggcacccctggttcctgccatcctggggtacccgattcaaagaaggaCTCTGCTCCCTGTCTGAGACCACCCCCGGCTCTGACTGAGAGTAAGGGGACTGTCAGGGCCTCGACTTGCCATTGGTTGGGGTCGTACGGGGCTGGGAGCCCTGCGTTTTGAGGCAGACCACTGCCCTTCCGACCTCAGTCCTGTCTGCTCCAGTCTTGCCCAGCTCGAAGGAGAGCAGATCTGACCACTTGCCAGCCCCTGTCTGCTGTGAATTACCATTTCCTTTGTCCTTCCCTTAGTTGGGTCTATTAGCTCAGATTGAGAGGTGTTGCCTTAAAACTGAGTTGGGTGACTTGGTACCTGCTCAGGACCCCCCGCACTGTCCCAATCCCACTCAGGCCCACCTCCAGCTGGCCTCACTCCGCTGGTGACTTCGTACCTGCTCAGGAGCCCCCACTGTCCCAGTCCCACTCAGGCCCATCTCTGGCTGGCCTCACTGCGCTGGGACTCCGCCTTCATAAGGAGAGCTCACTGCTCACGTTAGTAGATGGCCCCTTCTCGTGAGGCCTCTCCCCTGGCACCTGCTTCAGTTGTCCTCCACAGCACTGATTTGCAGCCCACAAGCTGGCAGGTTTATCTGTCTCATGTTTGTCTTGTGCTGGTGGGCAAGGGGTTTGTCTAGCACACCAGCATATAATGAGATGCTTGATGAATGGTGCATATTGAATGTATAAAGCCCACCGGTCCTGAGAGTTTGCTCACTGGAGACtttctggagatggagtctcgctctgttgcccaggctggcgagtgcaatggcgcgatcttggctcactgcagcctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggtgggtgtcaccacacccagctcagtattgtatttttagcagagatggggtttcaccattttgcccaggctggtttggaactcctgacttcaaattacccacctgcctcagcctcccaaagtgctggcattacaggcgCTCGAGGCTTTCTGATGTGGCTGCTGCTGCTCAGAAGGCCTTGTCCTTAACCACCTCCTTGCCTGCCCTGGAGGCTTGTGCCTCTAGGCCCCACCCCCTGTGGAGTCCTGCTGGCTTTCTCCATCCCTATCTGAATCCTCCCTGCTGTGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTTCCTGCGGGTGGCCAGCCTGTCTGTGTGGCTGGGCTGGGGAGGCCACGTCTGGTATCTGAATGCTATCGGTGGGTTGGGGTGGAGGAACCAGGAGAGGGCTGGAGGGAGGGAGATGGTCTCAGCCCCACAGAGTTTGGAGTCCTCAGTGTGCTGAGCAAACGTGGAGACACCATTTCCCTCCTCTAGACCTCATCTTGGAGAGAGAGATGTTGGATGGGGCCATCTATTCCAGCTTTATTCACACAAATCATGTCTGTTGGCCTGGAAATTGGAAAACCAGTTAaaccaaaaacatgatattaagaaaacaggcaggctcaccatagtaaaaatgctgaaagccaaagacaaaattgggagaacaaaagaaaagcgtcttgtcacatacagaaggtccctgataaagttagtagctgccctcatcagaaaccaggcccaggcagtggggacacatccagagtgctgaaagaaCCTCCCCCAGGTCATCCTATCCCCAAGAGTGATGCCCGGCAGCATTCCCAGCTCAGGGCtaatggttcacggaagccaggaatcaaactgcctgggttccagtcccagctctgccagttatgcccagctgtggggacttgggcagctcgtttagtagcaccgtgcctcagtttcccatatgtaaaaGGCCATTTTGAGTGCCTTTCACAGCCCTGCATAAGGCAGGTGTCTCAGtgttcactgctgtctctccagctcttagtccagtagctgcatggtgagtgAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCAcaggacatgctggcatctactgggtcagggctctgctgctcggtggctgtgcaaccttgggcaagttcctcaacctctctgtgtcttcgtaccctcatctgtaacatgcgtgtcgatagaccctactactcagggttgatgagaagattaaatgTGCAAAACCTGCTTGACTGTGCCCACAAATCCTGATTGTAGGAATAAATTAATGACTTTTTATAAATATTTTGATCAGATGGACTCATGATCACAGATGTCTTCACATGCCTATGACTAATTTGTACACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATGCCTGGTGGCTCCAGGTCTGCCCCGCCGTCCTGTGGGGCTGTGAGCTTTCCCAGCCTCCTGCCCGTGTTTGTGAATATCATTCTGTCCTCAGCTGCATTTCCAGCCCAGGCTGTTTGGCGCTGCCCAGGAATGGTATCAATTCCCCTGTTTCTCTTGTAGCCAGTTACTAGAATAAAATCATCTACTTTAAAA