Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL35A
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L35a
Also known as DBA5|L35A|eL33
Coordinate chr3:197950190-197956610
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L35AE family of ribosomal proteins. It is located in the cytoplasm. The rat protein has been shown to bind to both initiator and elongator tRNAs, and thus, it is located at the P site, or P and A sites, of the ribosome. Although this gene was originally mapped to chromosome 18, it has been established that it is located at 3q29-qter. Alternative splicing results in multiple transcript variants. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Oct 2015]

Retrocopy(s) from RPL35A

Retroname Coord Strand Genomic Region ENSG
RPL35AP23 chr10:45940458-45940896 + Intergenic
ENSG00000264217 UCSC
RPL35AP24 chr10:49909549-49909987 + Intragenic
ENSG00000230166 UCSC
RPL35AP7 chr1:164921403-164921692 - Intergenic
ENSG00000225487 UCSC
RPL35AP39 chr11:74154955-74155105 - Intragenic
N/A UCSC
RPL35AP5 chr1:203835559-203835964 - Intragenic
ENSG00000223505 UCSC
RPL35AP30 chr12:119959395-119959801 + Intergenic
ENSG00000226729 UCSC
RPL35AP27 chr12:32863038-32863468 + Intragenic
ENSG00000244743 UCSC
RPL35AP6 chr1:246755596-246755869 - Intragenic
ENSG00000228879 UCSC
RPL35AP28 chr12:49863109-49863541 + Intergenic
ENSG00000242041 UCSC
RPL35AP29 chr12:51106752-51107141 + Intragenic
ENSG00000244540 UCSC
RPL35AP32 chr15:66446452-66446836 - Intragenic
ENSG00000243404 UCSC
RPL35AP34 chr16:12881135-12881540 + Intergenic
ENSG00000241932 UCSC
RPL35AP35 chr17:29340507-29340853 - Intergenic
ENSG00000239256 UCSC
RPL35AP41 chr19:2874939-2875645 - Intragenic
ENSG00000267398 UCSC
RPL35AP36 chr22:43956973-43957390 + Intragenic
ENSG00000224856 UCSC
RPL35AP10 chr3:160342630-160343053 + Intragenic
ENSG00000243687 UCSC
RPL35AP8 chr3:42469578-42469915 + Intergenic
ENSG00000235787 UCSC
RPL35AP12 chr4:163382241-163382566 + Intergenic
ENSG00000227283 UCSC
RPL35AP11 chr4:94369777-94370200 + Intergenic
ENSG00000241103 UCSC
RPL35AP16 chr5:146137703-146138416 + Intragenic
ENSG00000239602 UCSC
RPL35AP14 chr5:62575978-62576313 - Intragenic
ENSG00000240436 UCSC
RPL35AP13 chr5:72878825-72879217 - Intragenic
ENSG00000242602 UCSC
RPL35AP3 chr6:136973929-136974259 - Intergenic
ENSG00000230350 UCSC
RPL35AP18 chr6:79964167-79964507 + Intergenic
ENSG00000220311 UCSC
RPL35AP19 chr8:121380095-121380522 - Intergenic
ENSG00000239872 UCSC
RPL35AP2 chr9:34191518-34191885 + Intragenic
ENSG00000227383 UCSC
RPL35AP20 chr9:6675225-6675662 + Intergenic
ENSG00000232946 UCSC
RPL35AP21 chr9:71589539-71589975 + Intergenic
ENSG00000229814 UCSC
RPL35AP37 chrX:15117392-15117810 - Intergenic
ENSG00000236929 UCSC
RPL35AP26 chr11:126278255-126278575 - Intergenic
ENSG00000243607 UCSC
RPL35AP31 chr13:71845947-71846352 + Intragenic
ENSG00000233460 UCSC
RPL35AP40 chr16:65938134-65938405 - Intergenic
ENSG00000261234 UCSC
RPL35AP33 chr16:68477293-68477571 - Intergenic
ENSG00000241334 UCSC
RPL35AP chr20:47478217-47478521 - Intergenic
ENSG00000234075 UCSC
RPL35AP9 chr3:158763481-158763739 + Intergenic
ENSG00000243675 UCSC
RPL35AP15 chr5:117301064-117301356 - Intergenic
ENSG00000243758 UCSC
RPL35AP38 chr6:35279143-35279422 - Intragenic
ENSG00000217004 UCSC
RPL35AP22 chr9:117685249-117685567 - Intergenic
ENSG00000235133 UCSC

Expression

Transcript Sequences

>NM_000996.4
CTTCTCTTACCGCCATCTTGGCTCCTGTGGAGGCCTGCTGGGAACGGGACTTCTAAAAGGAACTATGTCTGGAAGGCTGTGGTCCAAGGCCATTTTTGCTGGCTATAAGCGGGGTCTCCGGAACCAAAGGGAGCACACAGCTCTTCTTAAAATTGAAGGTGTTTACGCCCGAGATGAAACAGAATTCTATTTGGGCAAGAGATGCGCTTATGTATATAAAGCAAAGAACAACACAGTCACTCCTGGCGGCAAACCAAACAAAACCAGAGTCATCTGGGGAAAAGTAACTCGGGCCCATGGAAACAGTGGCATGGTTCGTGCCAAATTCCGAAGCAATCTTCCTGCTAAGGCCATTGGACACAGAATCCGAGTGATGCTGTACCCCTCAAGGATTTAAACTAACGAAAAATCAATAAATAAATGTGGATTTGTGCTCTTGTATTTTTAAGTGGATTAAAAAACTTACTACCTTAAATTGATTTGCTACATGCTTAAAATGATAGAGGTTGCTCAGCATTTTTGGAGTACAAGGGGGTCAGAGAGACATGTGATGAAAATTACAGGGCGAGTACAGAGATTTAGAAGGGAACGGGTTTTAATGCGAGTATCTTTgacagagtcttgctctgttgcccatgctggagtgtagtggtgctcgctgcagcctcacattcaaaggctcaagcaatcctcccttggcctttgaagtagctgggaccacaggctcatgccaccatccctgggtcatttttaaattttttgtagagagggtctgactcttgcctatgctggcttcaaactcctgggctcaagcaatcctccttccttggcctctcctgaagtgctgggatacagttatgagccaccacacctgCCAAGTGCTTTGTGATACTATGCATTTGTTCAATGCAGATTGGGAAACTTAAAATTTGAATGGAGATTATGTTGATGGGCTTTGGCAGTTCATTTGGATAGACTGGGATGAGAAGCTCTTGGGACTTGTGACTGGACAAAGCATTCCAGTATATTAAAATAAAATTAAGCCATATTACTCCACTCATAAAAAGCAATCCTATGGTAGGTACATGGAGGTTGGGAATAGTGCACGGAAAGGTGGCAGCTTTCTTTGGCTTCATGTTTTAATCTGGTAAAGTTCAAGATTGCACTTTAAGCAGGCCTCCTAAATATTTTAGATTTCTTGGGGATATGCTAAAATAAAACAACTAAGGCATCA
>NM_001316311.2
CTTCTCTTACCGCCATCTTGGCTCCTGTGGAGGTGAGTGAAGGGTCTGCTGCTGAAATTTGGGGGCAAATAACCGGAGTAGGTTTGTTCCTGTGCCTTGGCGAGTCGCCGGCCTGCTGGGAACGGGACTTCTAAAAGGAACTATGTCTGGAAGGCTGTGGTCCAAGGCCATTTTTGCTGGCTATAAGCGGGGTCTCCGGAACCAAAGGGAGCACACAGCTCTTCTTAAAATTGAAGGTGTTTACGCCCGAGATGAAACAGAATTCTATTTGGGCAAGAGATGCGCTTATGTATATAAAGCAAAGAACAACACAGTCACTCCTGGCGGCAAACCAAACAAAACCAGAGTCATCTGGGGAAAAGTAACTCGGGCCCATGGAAACAGTGGCATGGTTCGTGCCAAATTCCGAAGCAATCTTCCTGCTAAGGCCATTGGACACAGAATCCGAGTGATGCTGTACCCCTCAAGGATTTAAACTAACGAAAAATCAATAAATAAATGTGGATTTGTGCTCTTGTATTTTTAAGTGGATTAAAAAACTTACTACCTTAAATTGATTTGCTACATGCTTAAAATGATAGAGGTTGCTCAGCATTTTTGGAGTACAAGGGGGTCAGAGAGACATGTGATGAAAATTACAGGGCGAGTACAGAGATTTAGAAGGGAACGGGTTTTAATGCGAGTATCTTTgacagagtcttgctctgttgcccatgctggagtgtagtggtgctcgctgcagcctcacattcaaaggctcaagcaatcctcccttggcctttgaagtagctgggaccacaggctcatgccaccatccctgggtcatttttaaattttttgtagagagggtctgactcttgcctatgctggcttcaaactcctgggctcaagcaatcctccttccttggcctctcctgaagtgctgggatacagttatgagccaccacacctgCCAAGTGCTTTGTGATACTATGCATTTGTTCAATGCAGATTGGGAAACTTAAAATTTGAATGGAGATTATGTTGATGGGCTTTGGCAGTTCATTTGGATAGACTGGGATGAGAAGCTCTTGGGACTTGTGACTGGACAAAGCATTCCAGTATATTAAAATAAAATTAAGCCATATTACTCCACTCATAAAAAGCAATCCTATGGTAGGTACATGGAGGTTGGGAATAGTGCACGGAAAGGTGGCAGCTTTCTTTGGCTTCATGTTTTAATCTGGTAAAGTTCAAGATTGCACTTTAAGCAGGCCTCCTAAATATTTTAGATTTCTTGGGGATATGCTAAAATAAAACAACTAAGGCATCA