Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS2
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S2
Also known as LLREP3|S2
Coordinate chr16:1962058-1964826
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S5P family of ribosomal proteins. It is located in the cytoplasm. This gene shares sequence similarity with mouse LLRep3. It is co-transcribed with the small nucleolar RNA gene U64, which is located in its third intron. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPS2

Retroname Coord Strand Genomic Region ENSG
RPS2P36 chr10:96620833-96621482 - Intragenic
ENSG00000227032 UCSC
RPS2P61 chr1:113698845-113699075 - Intragenic
ENSG00000232450 UCSC
RPS2P75 chr11:17228261-17229188 + Intergenic
ENSG00000197149 UCSC
RPS2P76 chr11:23520474-23521242 + Intergenic
ENSG00000240881 UCSC
RPS2P62 chr1:161406044-161407121 + Intergenic
ENSG00000215840 UCSC
RPS2P77 chr11:62011731-62012481 - Intergenic
ENSG00000244176 UCSC
RPS2P63 chr1:165581626-165582512 + Intergenic
ENSG00000237783 UCSC
RPS2P64 chr1:198949148-198949839 + Intergenic
ENSG00000227747 UCSC
RPS2P5 chr12:118246060-118247002 + Intragenic
ENSG00000240342 UCSC
RPS2P78 chr12:15439503-15440438 + Intragenic
Intragenic
ENSG00000243916 UCSC
RPS2P79 chr12:43633106-43633275 + Intergenic
ENSG00000271508 UCSC
RPS2P56 chr1:32987088-32988247 + Intergenic
ENSG00000239670 UCSC
RPS2P57 chr1:37840936-37841712 + Intragenic
Intragenic
Intragenic
ENSG00000235673 UCSC
RPS2P58 chr1:39962523-39963377 + Intragenic
ENSG00000228477 UCSC
RPS2P4 chr14:104835959-104836907 - Intergenic
ENSG00000196183 UCSC
RPS2P2 chr14:74377689-74378623 - Intergenic
ENSG00000177776 UCSC
RPS2P80 chr14:75838873-75839113 - Intragenic
Intragenic
ENSG00000242488 UCSC
RPS2P81 chr14:99974394-99974575 - Intragenic
ENSG00000242888 UCSC
RPS2P59 chr1:50326115-50327046 + Intergenic
ENSG00000234080 UCSC
RPS2P60 chr1:51250561-51251494 - Intragenic
ENSG00000233406 UCSC
RPS2P44 chr16:48577483-48578218 - Intragenic
ENSG00000243609 UCSC
RPS2P45 chr16:69033943-69034555 + Intragenic
ENSG00000244378 UCSC
RPS2P82 chr17:18011416-18011835 + Intragenic
Intragenic
ENSG00000232344 UCSC
RPS2P46 chr17:19445932-19446875 - Intergenic
ENSG00000189343 UCSC
RPS2P83 chr17:36574424-36575286 - Intragenic
ENSG00000274756 UCSC
RPS2P84 chr17:37140568-37141382 - Intragenic
ENSG00000274308 UCSC
RPS2P85 chr17:47159156-47159995 - Intragenic
ENSG00000239291 UCSC
RPS2P48 chr17:53756954-53757901 - Intergenic
ENSG00000233380 UCSC
RPS2P6 chr18:70430353-70431158 + Intergenic
ENSG00000214255 UCSC
RPS2P86 chr19:12284313-12285219 + Intragenic
ENSG00000234750 UCSC
RPS2P87 chr19:16412734-16413606 + Intragenic
ENSG00000240418 UCSC
RPS2P52 chr19:690445-691208 + Intragenic
ENSG00000213726 UCSC
RPS2P1 chr20:34122466-34123324 + Intergenic
ENSG00000225246 UCSC
RPS2P7 chr20:45640451-45641393 - Intergenic
ENSG00000235508 UCSC
RPS2P88 chr20:47160938-47161689 - Intragenic
ENSG00000215450 UCSC
RPS2P16 chr2:201762836-201763610 + Intragenic
ENSG00000230799 UCSC
RPS2P17 chr2:84915762-84916699 + Intergenic
ENSG00000213399 UCSC
RPS2P66 chr4:134952154-134953068 - Intergenic
ENSG00000241411 UCSC
RPS2P67 chr4:143349237-143350140 - Intragenic
Intragenic
ENSG00000228981 UCSC
RPS2P65 chr4:43410006-43410960 - Intergenic
ENSG00000213851 UCSC
RPS2P69 chr5:115264616-115265413 - Intergenic
ENSG00000243304 UCSC
RPS2P68 chr5:65415388-65416259 + Intragenic
ENSG00000205644 UCSC
RPS2P24 chr5:77545516-77546300 + Intragenic
ENSG00000244019 UCSC
RPS2P28 chr6:43363548-43364328 + Intragenic
ENSG00000179157 UCSC
RPS2P71 chr7:124480507-124481426 + Intergenic
ENSG00000213296 UCSC
RPS2P32 chr7:23490577-23491396 + Intergenic
ENSG00000232818 UCSC
RPS2P72 chr8:97624163-97625043 - Intergenic
ENSG00000213750 UCSC
RPS2P35 chr9:100116715-100117608 - Intragenic
ENSG00000238172 UCSC
RPS2P74 chr9:82130742-82131666 + Intergenic
ENSG00000235377 UCSC
RPS2P55 chrX:40934944-40935887 - Intergenic
ENSG00000216866 UCSC

Expression

Transcript Sequences

>NM_002952.4
CTTCTTTTCCGACAAAACACCAAATGGCGGATGACGCCGGTGCAGCGGGGGGGCCCGGGGGCCCTGGTGGCCCTGGGATGGGGAACCGCGGTGGCTTCCGCGGAGGTTTCGGCAGTGGCATccggggccggggtcgcggccgtggacggggccggggccgaggccgcggAGCTCGCGGAGGCAAGGCCGAGGATAAGGAGTGGATGCCCGTCACCAAGTTGGGCCGCTTGGTCAAGGACATGAAGATCAAGTCCCTGGAGGAGATCTATCTCTTCTCCCTGCCTATTAAGGAATCAGAGATCATTGATTTCTTCCTGGGGGCCTCTCTCAAGGATGAGGTTTTGAAGATTATGCCAGTGCAGAAGCAGACCCGTGCCGGCCAGCGCACCAGGTTCAAGGCATTTGTTGCTATCGGGGACTACAATGGCCACGTCGGTCTGGGTGTTAAGTGCTCCAAGGAGGTGGCCACCGCCATCCGTGGGGCCATCATCCTGGCCAAGCTCTCCATCGTCCCCGTGCGCAGAGGCTACTGGGGGAACAAGATCGGCAAGCCCCACACTGTCCCTTGCAAGGTGACAGGCCGCTGCGGCTCTGTGCTGGTACGCCTCATCCCTGCACCCAGGGGCACTGGCATCGTCTCCGCACCTGTGCCTAAGAAGCTGCTCATGATGGCTGGTATCGATGACTGCTACACCTCAGCCCGGGGCTGCACTGCCACCCTGGGCAACTTCGCCAAGGCCACCTTTGATGCCATTTCTAAGACCTACAGCTACCTGACCCCCGACCTCTGGAAGGAGACTGTATTCACCAAGTCTCCCTATCAGGAGTTCACTGACCACCTCGTCAAGACCCACACCAGAGTCTCCGTGCAGCGGACTCAGGCTCCAGCTGTGGCTACAACATAGGGTTTTTATACAAGAAAAATAAAGTGAATTAAGCGTGTTA