Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS6
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S6
Also known as S6
Coordinate chr9:19375715-19380236
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a cytoplasmic ribosomal protein that is a component of the 40S subunit. The protein belongs to the S6E family of ribosomal proteins. It is the major substrate of protein kinases in the ribosome, with subsets of five C-terminal serine residues phosphorylated by different protein kinases. Phosphorylation is induced by a wide range of stimuli, including growth factors, tumor-promoting agents, and mitogens. Dephosphorylation occurs at growth arrest. The protein may contribute to the control of cell growth and proliferation through the selective translation of particular classes of mRNA. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPS6

Retroname Coord Strand Genomic Region ENSG
RPS6P15 chr10:111498171-111498951 - Intergenic
ENSG00000230809 UCSC
RPS6P14 chr10:48293004-48293176 + Intergenic
ENSG00000225482 UCSC
RPS6P33 chr11:102295034-102295839 + Intergenic
ENSG00000243777 UCSC
RPS6P16 chr11:112235363-112236025 - Intergenic
ENSG00000243250 UCSC
RPS6P35 chr12:101228127-101228917 - Intergenic
ENSG00000241744 UCSC
RPS6P34 chr12:12850959-12851741 + Intergenic
ENSG00000241352 UCSC
RPS6P21 chr12:131667479-131668159 + Intergenic
ENSG00000243499 UCSC
RPS6P22 chr12:59020160-59020916 + Intergenic
ENSG00000244390 UCSC
RPS6P23 chr13:99173683-99174310 + Intergenic
ENSG00000230871 UCSC
RPS6P36 chr14:30055556-30055858 + Intergenic
ENSG00000240201 UCSC
RPS6P25 chr19:12894096-12894901 + Intragenic
ENSG00000240616 UCSC
RPS6P3 chr2:101509569-101510309 - Intergenic
ENSG00000237549 UCSC
RPS6P2 chr2:179002116-179002595 + Intragenic
ENSG00000231541 UCSC
RPS6P4 chr3:163115907-163116097 + Intergenic
ENSG00000244571 UCSC
RPS6P27 chr4:64767230-64767801 - Intergenic
ENSG00000244669 UCSC
RPS6P28 chr4:82494805-82495934 - Intragenic
ENSG00000227304 UCSC
RPS6P8 chr6:73391055-73391781 - Intergenic
ENSG00000224221 UCSC
RPS6P29 chr8:103768239-103769063 + Intragenic
ENSG00000239344 UCSC
RPS6P30 chr9:4633030-4633684 + Intragenic
ENSG00000225893 UCSC
RPS6P12 chr9:82744241-82744836 - Intergenic
ENSG00000233309 UCSC
RPS6P32 chr9:86374532-86375747 - Intergenic
ENSG00000214908 UCSC
RPS6P26 chrX:74376089-74376923 - Intergenic
ENSG00000213269 UCSC

Expression

Transcript Sequences

>NM_001010.3
CTCTTTTCCGTGGCGCCTCGGAGGCGTTCAGCTGCTTCAAGATGAAGCTGAACATCTCCTTCCCAGCCACTGGCTGCCAGAAACTCATTGAAGTGGACGATGAACGCAAACTTCGTACTTTCTATGAGAAGCGTATGGCCACAGAAGTTGCTGCTGACGCTCTGGGTGAAGAATGGAAGGGTTATGTGGTCCGAATCAGTGGTGGGAACGACAAACAAGGTTTCCCCATGAAGCAGGGTGTCTTGACCCATGGCCGTGTCCGCCTGCTACTGAGTAAGGGGCATTCCTGTTACAGACCAAGGAGAACTGGAGAAAGAAAGAGAAAATCAGTTCGTGGTTGCATTGTGGATGCAAATCTGAGCGTTCTCAACTTGGTTATTGTAAAAAAAGGAGAGAAGGATATTCCTGGACTGACTGATACTACAGTGCCTCGCCGCCTGGGCCCCAAAAGAGCTAGCAGAATCCGCAAACTTTTCAATCTCTCTAAAGAAGATGATGTCCGCCAGTATGTTGTAAGAAAGCCCTTAAATAAAGAAGGTAAGAAACCTAGGACCAAAGCACCCAAGATTCAGCGTCTTGTTACTCCACGTGTCCTGCAGCACAAACGGCGGCGTATTGCTCTGAAGAAGCAGCGTACCAAGAAAAATAAAGAAGAGGCTGCAGAATATGCTAAACTTTTGGCCAAGAGAATGAAGGAGGCTAAGGAGAAGCGCCAGGAACAAATTGCGAAGAGACGCAGACTTTCCTCTCTGCGAGCTTCTACTTCTAAGTCTGAATCCAGTCAGAAATAAGATTTTTTGAGTAACAAATAAATAAGATCAGACTCTGATCTCTGTTGACTTTTCATTGCTGATAGAAAACTACATAAATGAAGAGAGGGAAAGTTAGGTCATAGAAAATGGGGATATGTATATATGGTATTCCAATGGTGGATAAAGTCAGACCTATTGTGTGTGGTAGTGGAAGACAAGGTCAGTGTACAGGGGTTCCTTTCAGGGGATGGGTGGCACAGGAAGGGATTCTGAGCATAAGACACCTGCCTCTTCAGAATGGCATGGAACTTAGGGGAAATGATGAGGACTATTAATCTTTTTTATATAGTTTATTTTTGAGGAATATAGCTCTTTAAAGCACTATACACAATTTAATACATGAAAATTGACCTTGTGAAGATGAACATGTCTTTTTTAAAAGGTAACTTTTAAGGCATAGTTTTAGTGGATACCTAGTTTTAGTGGATACCATCCACTAAATGGTTTTTAAGCCATTTCAAATTTGTTTTAACAAAGCTTTTCAACTCCAGTGAATTGTTAGGCTGTTCACACACTGAAAAGGAAATGACTAAAAACATTCTTGGATCAGTGAAAAA