Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS8
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S8
Also known as S8
Coordinate chr1:44775540-44778779
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S8E family of ribosomal proteins. It is located in the cytoplasm. Increased expression of this gene in colorectal tumors and colon polyps compared to matched normal colonic mucosa has been observed. This gene is co-transcribed with the small nucleolar RNA genes U38A, U38B, U39, and U40, which are located in its fourth, fifth, first, and second introns, respectively. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPS8

Retroname Coord Strand Genomic Region ENSG
RPS8P4 chr10:119638432-119639130 + Intergenic
ENSG00000227437 UCSC
RPS8P11 chr14:105978466-105979169 - Intergenic
ENSG00000225200 UCSC
RPS8P12 chr15:21709594-21710295 - Intergenic
ENSG00000281087 UCSC
RPS8P3 chr18:51844955-51845634 - Intergenic
ENSG00000215457 UCSC
RPS8P13 chr19:20080169-20080562 - Intragenic
ENSG00000240673 UCSC
RPS8P6 chr3:308811-308978 - Intragenic
Intragenic
ENSG00000231660 UCSC
RPS8P7 chr3:57530339-57530962 - Intragenic
ENSG00000237186 UCSC
RPS8P9 chr5:180226332-180227000 - Intergenic
ENSG00000229721 UCSC
RPS8P8 chr5:33162148-33162859 + Intergenic
ENSG00000240376 UCSC
RPS8P10 chr9:34223930-34224651 - Intragenic
ENSG00000233668 UCSC

Expression

Transcript Sequences

>NM_001012.2
GTTTTACAAACCGAACCGTGAATCTTTGCGGTTTCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACAACTGGCACAAGCGCCGCAAAACCGGGGGCAAGAGAAAGCCCTACCACAAGAAGCGGAAGTATGAGTTGGGGCGCCCAGCTGCCAACACCAAGATTGGCCCCCGCCGCATCCACACAGTCCGTGTGCGGGGAGGTAACAAGAAATACCGTGCCCTGAGGTTGGACGTGGGGAATTTCTCCTGGGGCTCAGAGTGTTGTACTCGTAAAACAAGGATCATCGATGTTGTCTACAATGCATCTAATAACGAGCTGGTTCGTACCAAGACCCTGGTGAAGAATTGCATCGTGCTCATCGACAGCACACCGTACCGACAGTGGTACGAGTCCCACTATGCGCTGCCCCTGGGCCGCAAGAAGGGAGCCAAGCTGACTCCTGAGGAAGAAGAGATTTTAAACAAAAAACGATCTAAAAAAATTCAGAAGAAATATGATGAAAGGAAAAAGAATGCCAAAATCAGCAGTCTCCTGGAGGAGCAGTTCCAGCAGGGCAAGCTTCTTGCGTGCATCGCTTCAAGGCCGGGACAGTGTGGCCGAGCAGATGGCTATGTGCTAGAGGGCAAAGAGTTGGAGTTCTATCTTAGGAAAATCAAGGCCCGCAAAGGCAAATAAATCCTTGTTTTGTCTTCACCCATGTAATAAAGGTGTTTATTGTTTTGTTCCCACATTTATGTTGCCTGAATATATGACTGTTTTCTCTGCTTTA