Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS10
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S10
Also known as DBA9|S10
Coordinate chr6:34417454-34426069
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S10E family of ribosomal proteins. It is located in the cytoplasm. Variable expression of this gene in colorectal cancers compared to adjacent normal tissues has been observed, although no correlation between the level of expression and the severity of the disease has been found. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Alternate splicing results in multiple transcript variants that encode the same protein. Naturally occurring read-through transcription occurs between this locus and the neighboring locus NUDT3 (nudix (nucleoside diphosphate linked moiety X)-type motif 3).[provided by RefSeq, Feb 2011]

Retrocopy(s) from RPS10

Retroname Coord Strand Genomic Region ENSG
RPS10P18 chr10:124489787-124490615 - Intragenic
ENSG00000229455 UCSC
RPS10P29 chr1:151557408-151557987 + Intragenic
ENSG00000223861 UCSC
RPS10P30 chr1:158195581-158196147 - Intergenic
ENSG00000229914 UCSC
RPS10P7 chr1:201520017-201520596 + Intergenic
ENSG00000223396 UCSC
RPS10P20 chr12:48487935-48488487 + Intragenic
ENSG00000240443 UCSC
RPS10P43 chr16:21538487-21538847 + Intergenic
ENSG00000257639 UCSC
RPS10P45 chr16:29624512-29624872 + Intergenic
ENSG00000260514 UCSC
RPS10P47 chr16:74552216-74552781 + Intragenic
ENSG00000240861 UCSC
RPS10P50 chr17:62516274-62516804 - Intragenic
ENSG00000239246 UCSC
RPS10P27 chr18:23672203-23672766 - Intergenic
ENSG00000267752 UCSC
RPS10P2 chr20:14757560-14758108 + Intragenic
ENSG00000213950 UCSC
RPS10P5 chr20:839400-840015 - Intragenic
ENSG00000101278 UCSC
RPS10P52 chr22:23322491-23322927 - Intergenic
ENSG00000214526 UCSC
RPS10P53 chr22:24269300-24269689 - Intergenic
ENSG00000215464 UCSC
RPS10P54 chr22:45275560-45276131 + Intergenic
ENSG00000213752 UCSC
RPS10P9 chr2:64665570-64666121 + Intragenic
ENSG00000227791 UCSC
RPS10P31 chr3:62926351-62926928 + Intergenic
ENSG00000226082 UCSC
RPS10P35 chr5:134422827-134423381 + Intergenic
ENSG00000243648 UCSC
RPS10P36 chr6:26202136-26202705 + Intergenic
ENSG00000217275 UCSC
RPS10P37 chr6:34744139-34744718 + Intergenic
ENSG00000217130 UCSC
RPS10P3 chr9:88016286-88016848 + Intergenic
ENSG00000217716 UCSC
RPS10P41 chr11:46428600-46429381 - Intragenic
ENSG00000244313 UCSC
RPS10P48 chr16:87892952-87893785 + Intragenic
ENSG00000270385 UCSC
RPS10P51 chr19:4621543-4622357 + Intergenic
ENSG00000267408 UCSC
RPS10P33 chr4:165045970-165046326 + Intergenic
ENSG00000249617 UCSC
RPS10P14 chr7:37375519-37376069 + Intragenic
ENSG00000213744 UCSC
RPS10P21 chr13:71913693-71914161 - Intergenic
ENSG00000232881 UCSC
RPS10P42 chr15:60404426-60405006 + Intergenic
ENSG00000242667 UCSC
RPS10P46 chr16:70079093-70079658 - Intergenic
ENSG00000241183 UCSC
RPS10P49 chr17:49148442-49148774 - Intragenic
ENSG00000240995 UCSC
RPS10P28 chr19:42670352-42670861 + Intergenic
ENSG00000243167 UCSC
RPS10P32 chr3:113850187-113850769 - Intragenic
ENSG00000240776 UCSC
RPS10P34 chr5:51275251-51275772 + Intergenic
ENSG00000240627 UCSC
RPS10P38 chr7:128570194-128570725 - Intergenic
ENSG00000213280 UCSC
RPS10P16 chr8:117523216-117523726 - Intragenic
ENSG00000239917 UCSC
RPS10P40 chr9:125263535-125264090 - Intergenic
ENSG00000214593 UCSC

Expression

Transcript Sequences

>NM_001014.5
CCTTTCCAGCCCCGGTACCGGACCCTGCAGCCGCAGAGATGTTGATGCCTAAGAAGAACCGGATTGCCATTTATGAACTCCTTTTTAAGGAGGGAGTCATGGTGGCCAAGAAGGATGTCCACATGCCTAAGCACCCGGAGCTGGCAGACAAGAATGTGCCCAACCTTCATGTCATGAAGGCCATGCAGTCTCTCAAGTCCCGAGGCTACGTGAAGGAACAGTTTGCCTGGAGACATTTCTACTGGTACCTTACCAATGAGGGTATCCAGTATCTCCGTGATTACCTTCATCTGCCCCCGGAGATTGTGCCTGCCACCCTACGCCGTAGCCGTCCAGAGACTGGCAGGCCTCGGCCTAAAGGTCTGGAGGGTGAGCGACCTGCGAGACTCACAAGAGGGGAAGCTGACAGAGATACCTACAGACGGAGTGCTGTGCCACCTGGTGCCGACAAGAAAGCCGAGGCTGGGGCTGGGTCAGCAACCGAATTCCAGTTTAGAGGCGGATTTGGTCGTGGACGTGGTCAGCCACCTCAGTAAAATTGGAGAGGATTCTTTTGCATTGAATAAACTTACAGCCAAAAAACCTTAA
>NM_001203245.3
CCTTTCCAGCCCCGGTACCGGACCCTGCAGCCGCAGAGGTGAGTTTCTGTGGCGTTCGAGTTCCATCGGCTCCCATCCGGGCTATCCTGCCGCCTTAGCGGCTGCTTCTCCCCAGGATGCGGGCAGGGGGCCTCTCTCCCACTCCCCACACACCGATTTCTGAGTAGCGATAGGGGCTGGAGGCTTATTTTATGGGGTAGGGGGCCGCTGGTAGGCGAAGATTGTCCGAGGGAGAGGGGGAGGATGAAGCCAGTGAGTGGCGGAGACTTGCCAGATGTTGATGCCTAAGAAGAACCGGATTGCCATTTATGAACTCCTTTTTAAGGAGGGAGTCATGGTGGCCAAGAAGGATGTCCACATGCCTAAGCACCCGGAGCTGGCAGACAAGAATGTGCCCAACCTTCATGTCATGAAGGCCATGCAGTCTCTCAAGTCCCGAGGCTACGTGAAGGAACAGTTTGCCTGGAGACATTTCTACTGGTACCTTACCAATGAGGGTATCCAGTATCTCCGTGATTACCTTCATCTGCCCCCGGAGATTGTGCCTGCCACCCTACGCCGTAGCCGTCCAGAGACTGGCAGGCCTCGGCCTAAAGGTCTGGAGGGTGAGCGACCTGCGAGACTCACAAGAGGGGAAGCTGACAGAGATACCTACAGACGGAGTGCTGTGCCACCTGGTGCCGACAAGAAAGCCGAGGCTGGGGCTGGGTCAGCAACCGAATTCCAGTTTAGAGGCGGATTTGGTCGTGGACGTGGTCAGCCACCTCAGTAAAATTGGAGAGGATTCTTTTGCATTGAATAAACTTACAGCCAAAAAACCTTAA
>NM_001204091.2
CCTTTCCAGCCCCGGTACCGGACCCTGCAGCCGCAGAGGTGAATGTTGATGCCTAAGAAGAACCGGATTGCCATTTATGAACTCCTTTTTAAGGAGGGAGTCATGGTGGCCAAGAAGGATGTCCACATGCCTAAGCACCCGGAGCTGGCAGACAAGAATGTGCCCAACCTTCATGTCATGAAGGCCATGCAGTCTCTCAAGTCCCGAGGCTACGTGAAGGAACAGTTTGCCTGGAGACATTTCTACTGGTACCTTACCAATGAGGGTATCCAGTATCTCCGTGATTACCTTCATCTGCCCCCGGAGATTGTGCCTGCCACCCTACGCCGTAGCCGTCCAGAGACTGGCAGGCCTCGGCCTAAAGGTCTGGAGGGTGAGCGACCTGCGAGACTCACAAGAGGGGAAGCTGACAGAGATACCTACAGACGGAGTGCTGTGCCACCTGGTGCCGACAAGAAAGCCGAGGCTGGGGCTGGGTCAGCAACCGAATTCCAGTTTAGAGGCGGATTTGGTCGTGGACGTGGTCAGCCACCTCAGTAAAATTGGAGAGGATTCTTTTGCATTGAATAAACTTACAGCCAAAAAACCTTAA