Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS11
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S11
Also known as S11
Coordinate chr19:49496434-49499708
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a member of the S17P family of ribosomal proteins that is a component of the 40S subunit. This gene is co-transcribed with the small nucleolar RNA gene U35B, which is located in the third intron. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed throughout the genome. [provided by RefSeq, Jul 2012]

Retrocopy(s) from RPS11

Retroname Coord Strand Genomic Region ENSG
RPS11P9 chr1:151758178-151758337 + Intergenic
ENSG00000236940 UCSC
RPS11P5 chr12:132825680-132826237 + Intergenic
ENSG00000232888 UCSC
RPS11P10 chr1:240636533-240637073 - Intergenic
ENSG00000228844 UCSC
RPS11P12 chr12:64396503-64397051 + Intergenic
N/A UCSC
RPS11P8 chr1:49691245-49691524 - Intragenic
ENSG00000237478 UCSC
RPS11P13 chr16:67855912-67856115 - Intragenic
ENSG00000262141 UCSC
RPS11P1 chr20:11345333-11345826 - Intergenic
ENSG00000235544 UCSC
RPS11P11 chr9:32727269-32727423 - Intergenic
ENSG00000230867 UCSC
RPS11P7 chrX:39865441-39865936 + Intergenic
ENSG00000214047 UCSC

Expression

Transcript Sequences

>NM_001015.5
CTTTTTTTCAGGCGGCCGGGAAGATGGCGGACATTCAGACTGAGCGTGCCTACCAAAAGCAGCCGACCATCTTTCAAAACAAGAAGAGGGTCCTGCTGGGAGAAACTGGCAAGGAGAAGCTCCCGCGGTACTACAAGAACATCGGTCTGGGCTTCAAGACACCCAAGGAGGCTATTGAGGGCACCTACATTGACAAGAAATGCCCCTTCACTGGTAATGTGTCCATTCGAGGGCGGATCCTCTCTGGCGTGGTGACCAAGATGAAGATGCAGAGGACCATTGTCATCCGCCGAGACTATCTGCACTACATCCGCAAGTACAACCGCTTCGAGAAGCGCCACAAGAACATGTCTGTACACCTGTCCCCCTGCTTCAGGGACGTCCAGATCGGTGACATCGTCACAGTGGGCGAGTGCCGGCCTCTGAGCAAGACAGTGCGCTTCAACGTGCTCAAGGTCACCAAGGCTGCCGGCACCAAGAAGCAGTTCCAGAAGTTCTGAGGCTGGACATCGGCCCGCTCCCCACAATGAAATAAAGTTATTTTCTCATTCCCAGGCCAGACTTGGGATCTTC