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Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS13
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S13
Also known as S13
Coordinate chr11:17074388-17077667
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S15P family of ribosomal proteins. It is located in the cytoplasm. The protein has been shown to bind to the 5.8S rRNA in rat. The gene product of the E. coli ortholog (ribosomal protein S15) functions at early steps in ribosome assembly. This gene is co-transcribed with two U14 small nucleolar RNA genes, which are located in its third and fifth introns. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPS13

Retroname Coord Strand Genomic Region ENSG
RPS13P6 chr1:165671352-165671773 + Intragenic
ENSG00000230175 UCSC
RPS13P2 chr1:52772149-52772674 - Intragenic
ENSG00000228929 UCSC
RPS13P8 chr15:52095276-52095789 + Intergenic
ENSG00000242327 UCSC
RPS13P9 chr15:57555904-57556400 - Intergenic
ENSG00000240874 UCSC
RPS13P4 chr2:23900687-23901186 + Intragenic
ENSG00000238111 UCSC
RPS13P5 chr2:24968888-24969222 - Intragenic
ENSG00000237953 UCSC
RPS13P3 chr2:42469790-42470304 + Intragenic
ENSG00000236913 UCSC
RPS13P7 chr5:134267473-134267900 + Intragenic
ENSG00000239615 UCSC
RPS13P10 chrX:53337733-53337911 - Intergenic
ENSG00000236571 UCSC

Expression

Transcript Sequences

>NM_001017.3
CCTTTCGTTGCCTGATCGCCGCCATCATGGGTCGCATGCATGCTCCCGGGAAGGGCCTGTCCCAGTCGGCTTTACCCTATCGACGCAGCGTCCCCACTTGGTTGAAGTTGACATCTGACGACGTGAAGGAGCAGATTTACAAACTGGCCAAGAAGGGCCTTACTCCTTCACAGATCGGTGTAATCCTGAGAGATTCACATGGTGTTGCACAAGTACGTTTTGTGACAGGCAATAAAATTTTAAGAATTCTTAAGTCTAAGGGACTTGCTCCTGATCTTCCTGAAGATCTCTACCATTTAATTAAGAAAGCAGTTGCTGTTCGAAAGCATCTTGAGAGGAACAGAAAGGATAAGGATGCTAAATTCCGTCTGATTCTAATAGAGAGCCGGATTCACCGTTTGGCTCGATATTATAAGACCAAGCGAGTCCTCCCTCCCAATTGGAAATATGAATCATCTACAGCCTCTGCCCTGGTCGCATAAATTTGTCTGTGTACTCAAGCAATAAAATGATTGTTTAACTAAAAG