Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS15A
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S15a
Also known as DBA20|S15a
Coordinate chr16:18781295-18790334
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S8P family of ribosomal proteins. It is located in the cytoplasm. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPS15A

Retroname Coord Strand Genomic Region ENSG
RPS15AP29 chr10:103124978-103125295 - Intragenic
ENSG00000237827 UCSC
RPS15AP30 chr10:112987488-112987876 + Intragenic
ENSG00000227560 UCSC
RPS15AP6 chr1:21003542-21003803 - Intragenic
ENSG00000233072 UCSC
RPS15AP41 chr1:42412357-42412782 - Intragenic
ENSG00000235002 UCSC
RPS15AP51 chr14:50053242-50053576 + Intergenic
ENSG00000243038 UCSC
RPS15AP53 chr15:67973760-67974634 - Intergenic
ENSG00000261702 UCSC
RPS15AP16 chr3:128798840-128799174 - Intragenic
ENSG00000239483 UCSC
RPS15AP18 chr5:179933790-179934170 - Intragenic
ENSG00000242979 UCSC
RPS15AP46 chr6:156976812-156977099 + Intragenic
ENSG00000218596 UCSC
RPS15AP49 chr8:94688226-94688644 + Intragenic
ENSG00000241003 UCSC
RPS15AP27 chr9:107963665-107963944 - Intergenic
ENSG00000236783 UCSC
RPS15AP5 chr10:121713576-121714037 + Intergenic
ENSG00000223540 UCSC
RPS15AP28 chr10:69300392-69300839 - Intergenic
ENSG00000229197 UCSC
RPS15AP9 chr1:117138226-117138643 + Intergenic
ENSG00000228453 UCSC
RPS15AP50 chr11:28287198-28287640 - Intragenic
ENSG00000238149 UCSC
RPS15AP32 chr12:113054031-113054326 + Intergenic
ENSG00000242461 UCSC
RPS15AP12 chr1:220143924-220144368 - Intragenic
ENSG00000232134 UCSC
RPS15AP3 chr14:47444079-47444521 - Intragenic
ENSG00000214903 UCSC
RPS15AP11 chr1:44780284-44780745 - Intergenic
ENSG00000234093 UCSC
RPS15AP10 chr1:45645781-45646171 - Intragenic
ENSG00000225447 UCSC
RPS15AP52 chr14:60602132-60602539 - Intergenic
ENSG00000241354 UCSC
RPS15AP7 chr1:62190491-62190961 + Intergenic
ENSG00000234088 UCSC
RPS15AP54 chr16:28813941-28814322 - Intergenic
ENSG00000240634 UCSC
RPS15AP34 chr16:63350716-63351156 - Intergenic
ENSG00000241808 UCSC
RPS15AP55 chr17:56952109-56952438 + Intragenic
ENSG00000262623 UCSC
RPS15AP56 chr18:32075845-32076302 - Intragenic
ENSG00000214917 UCSC
RPS15AP36 chr19:58216178-58216570 + Intergenic
ENSG00000213013 UCSC
RPS15AP1 chr20:21166164-21166614 - Intragenic
ENSG00000214535 UCSC
RPS15AP14 chr2:175184184-175184655 + Intergenic
ENSG00000233131 UCSC
RPS15AP57 chr22:31113103-31113406 + Intragenic
ENSG00000235573 UCSC
RPS15AP38 chr22:36421229-36421645 - Intergenic
ENSG00000237668 UCSC
RPS15AP42 chr2:27455136-27455914 + Intragenic
ENSG00000235267 UCSC
RPS15AP15 chr2:65511728-65512165 - Intergenic
ENSG00000223739 UCSC
RPS15AP13 chr2:72288713-72289152 + Intragenic
ENSG00000228568 UCSC
RPS15AP17 chr4:62105619-62106079 - Intergenic
ENSG00000225405 UCSC
RPS15AP45 chr6:121381438-121381896 + Intergenic
ENSG00000220447 UCSC
RPS15AP43 chr6:35555845-35556304 + Intergenic
ENSG00000219023 UCSC
RPS15AP44 chr6:51537132-51537575 - Intergenic
ENSG00000214641 UCSC
RPS15AP47 chr7:131702223-131702681 - Intergenic
ENSG00000236395 UCSC
RPS15AP48 chr7:133314972-133315441 - Intragenic
ENSG00000235429 UCSC
RPS15AP24 chr8:30117344-30117801 - Intragenic
ENSG00000241511 UCSC
RPS15AP25 chr8:68525482-68525928 - Intragenic
ENSG00000236191 UCSC
RPS15AP40 chrX:36374754-36375213 - Intragenic
ENSG00000233921 UCSC
RPS15AP39 chrX:41748182-41748661 + Intragenic
ENSG00000229822 UCSC

Expression

Transcript Sequences

>NM_001019.5
CTCTTTCCGCCATCTTTCCGCGCCGGTGAGTAGCACTCTCTGAGAGCTCCAATTTCATCCGTCTGCCATCGGCGCCATCCTGCAATCTAAGCCACAATGGTGCGCATGAATGTCCTGGCAGATGCTCTCAAGAGTATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTGCTTATTAGGCCGTGCTCCAAAGTCATCGTCCGGTTTCTCACTGTGATGATGAAGCATGGTTACATTGGCGAATTTGAAATCATTGATGACCACAGAGCTGGGAAAATTGTTGTGAACCTCACAGGCAGGCTAAACAAGTGTGGGGTGATCAGCCCCAGATTTGACGTGCAACTCAAAGACCTGGAAAAATGGCAGAATAATCTGCTTCCATCCCGCCAGTTTGGTTTCATTGTACTGACAACCTCAGCTGGCATCATGGACCATGAAGAAGCAAGACGAAAACACACAGGAGGGAAAATCCTGGGATTCTTTTTCTAGGGATGTAATACATATATTTACAAATAAAATGCCTCATGGACTCTGGTGCTTCCACTTGGTCGTTTTGAGCCTTTACAGCAGTGTAGCCACAGCTTCTGCGGCAGCATGCAGTTGCTTCGTTTATCGGTGAATGCGATTCCCTGAAGTGACTAATACAGCCAAGGGAAAAAGTTCTTATGAAACCAGTATGCCTAAGAAACAGTCACCCCTGCTGTCTGCCAAAACCAGGTATTTGACACTAAATATTTTAGTTGTATTTCAGtttttttttttttttttcttttttggagacagagtctgactctattgctcaggctggagtgcagtggcgcgatcttggcccactgcaacctccacctcccgggttcaagtgattgtcctgtctcagccgcctgagtaactgggattacaagtgtgtgtcgccacatccggctaatttttatattttagtagagacagggtttcgccatgttgcccaggctggtcttgagttctgggcctcaagtgatcagcctacctcggcctcccgaagtgctgggattacagccacgagccattacacctggccTATATTTCAGTATTTTCTATTAGTTTTTGATGAATTTGTTTTGCCTGGCTAGGATTATTCTGTAGATAGGATTTTAGATCTGGCTTTTGTCACTGACTGCTGTAATAAATACTTGCTAGGAAtttttttttttttttttttttttttaagacaaagtcgctctgtcacacaggctggagtgcagtggcatgatcttggctcactgcacctccgcttcccagattcaagtagttctcgtgcctcagcctcctgagtagctgggattacaggtgtgtgccaccatgtctggctgatttttgtatttttagtagaggtggggtttcaccatgttggccaggctggtctcgaactcctgatctcaagtgatctgcctgccttggtctcccaaagtgctgggattacaggtgtgaccaccacgccctgccTTAAGAATTGTTCCAAGAGAATCTGGTGCCACTTGCAGGTGCCCATTGAAGTGCAATGGGCACTGTTGATCACTGAGGAGGTAGTGGGTGCTGACCCGGTGCTGGGGCCTGTCCCCTAGTCTCTGCTTTGCCCTTGGCTAGCTAGGTGGTGTGCCAAGTGGGGAGAGAAGCTACCTTATTAAGGGGCATGGATCAGCTTCCTGAAAGGAGGGCCTGCCTCTGTAAGATATGGGAAGTCGCTGAGAATGTTACAGAACGGCCCTAGAGATGGGGCAGATAACGGCCCCCATTTGTGAGAAGTGAGTTGGGAGGCATGTTTGGGGCCTCTGATGTTTGGGAGGCTGTGGGTAATTAACATGAGTTTTGGGGTCCAGCAGCAGAATTCAGGTTTCCTCTTccactcagtaacctcagcatccgtatctgtaatgggaatgatacaaaacctatccccaagttgagggaaaaatgagattgtgtaaagcgcacttggcacatgacagtcacaAGCATGGGGACAGTGAGTCCAGAAGGATTTTCTTATGCCAGCattgtaagccctaggatcacagggctctggcttgtttaaccatcgtgtctctggtccctagcctgcaaacctggtgtgtagggatgcctcagtcgcttacatgttgattgagtgaatCGTCGGTTTCTTTCTGGACACTGACTTCAAAAATAAAATAGGATATGAAAATGG
>NM_001030009.2
CTCTTTCCGCCATCTTTCCGCGCCGCCACAATGGTGCGCATGAATGTCCTGGCAGATGCTCTCAAGAGTATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTGCTTATTAGGCCGTGCTCCAAAGTCATCGTCCGGTTTCTCACTGTGATGATGAAGCATGGTTACATTGGCGAATTTGAAATCATTGATGACCACAGAGCTGGGAAAATTGTTGTGAACCTCACAGGCAGGCTAAACAAGTGTGGGGTGATCAGCCCCAGATTTGACGTGCAACTCAAAGACCTGGAAAAATGGCAGAATAATCTGCTTCCATCCCGCCAGTTTGGTTTCATTGTACTGACAACCTCAGCTGGCATCATGGACCATGAAGAAGCAAGACGAAAACACACAGGAGGGAAAATCCTGGGATTCTTTTTCTAGGGATGTAATACATATATTTACAAATAAAATGCCTCATGGACTCTGGTGCTTCCACTTGGTCGTTTTGAGCCTTTACAGCAGTGTAGCCACAGCTTCTGCGGCAGCATGCAGTTGCTTCGTTTATCGGTGAATGCGATTCCCTGAAGTGACTAATACAGCCAAGGGAAAAAGTTCTTATGAAACCAGTATGCCTAAGAAACAGTCACCCCTGCTGTCTGCCAAAACCAGGTATTTGACACTAAATATTTTAGTTGTATTTCAGtttttttttttttttttcttttttggagacagagtctgactctattgctcaggctggagtgcagtggcgcgatcttggcccactgcaacctccacctcccgggttcaagtgattgtcctgtctcagccgcctgagtaactgggattacaagtgtgtgtcgccacatccggctaatttttatattttagtagagacagggtttcgccatgttgcccaggctggtcttgagttctgggcctcaagtgatcagcctacctcggcctcccgaagtgctgggattacagccacgagccattacacctggccTATATTTCAGTATTTTCTATTAGTTTTTGATGAATTTGTTTTGCCTGGCTAGGATTATTCTGTAGATAGGATTTTAGATCTGGCTTTTGTCACTGACTGCTGTAATAAATACTTGCTAGGAAtttttttttttttttttttttttttaagacaaagtcgctctgtcacacaggctggagtgcagtggcatgatcttggctcactgcacctccgcttcccagattcaagtagttctcgtgcctcagcctcctgagtagctgggattacaggtgtgtgccaccatgtctggctgatttttgtatttttagtagaggtggggtttcaccatgttggccaggctggtctcgaactcctgatctcaagtgatctgcctgccttggtctcccaaagtgctgggattacaggtgtgaccaccacgccctgccTTAAGAATTGTTCCAAGAGAATCTGGTGCCACTTGCAGGTGCCCATTGAAGTGCAATGGGCACTGTTGATCACTGAGGAGGTAGTGGGTGCTGACCCGGTGCTGGGGCCTGTCCCCTAGTCTCTGCTTTGCCCTTGGCTAGCTAGGTGGTGTGCCAAGTGGGGAGAGAAGCTACCTTATTAAGGGGCATGGATCAGCTTCCTGAAAGGAGGGCCTGCCTCTGTAAGATATGGGAAGTCGCTGAGAATGTTACAGAACGGCCCTAGAGATGGGGCAGATAACGGCCCCCATTTGTGAGAAGTGAGTTGGGAGGCATGTTTGGGGCCTCTGATGTTTGGGAGGCTGTGGGTAATTAACATGAGTTTTGGGGTCCAGCAGCAGAATTCAGGTTTCCTCTTccactcagtaacctcagcatccgtatctgtaatgggaatgatacaaaacctatccccaagttgagggaaaaatgagattgtgtaaagcgcacttggcacatgacagtcacaAGCATGGGGACAGTGAGTCCAGAAGGATTTTCTTATGCCAGCattgtaagccctaggatcacagggctctggcttgtttaaccatcgtgtctctggtccctagcctgcaaacctggtgtgtagggatgcctcagtcgcttacatgttgattgagtgaatCGTCGGTTTCTTTCTGGACACTGACTTCAAAAATAAAATAGGATATGAAAATGG