Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS21
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S21
Also known as HLDF|S21
Coordinate chr20:62386275-62388520
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S21E family of ribosomal proteins. It is located in the cytoplasm. Alternative splice variants that encode different protein isoforms have been described, but their existence has not been verified. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPS21

Retroname Coord Strand Genomic Region ENSG
RPS21P1 chr1:235432951-235433209 + Intergenic
ENSG00000229795 UCSC
RPS21P8 chr13:26977568-26977740 + Intergenic
ENSG00000223782 UCSC
RPS21P13 chr18:46723079-46723265 + Intragenic
ENSG00000240983 UCSC
RPS21P2 chr2:106288748-106289100 - Intergenic
ENSG00000230353 UCSC
RPS21P9 chr2:109665646-109665813 + Intergenic
ENSG00000230603 UCSC
RPS21P4 chr4:16256253-16256601 - Intergenic
ENSG00000242358 UCSC
RPS21P10 chr4:78768498-78768804 + Intergenic
ENSG00000239793 UCSC
RPS21P12 chr9:110727399-110727679 - Intragenic
ENSG00000223918 UCSC
RPS21P11 chr9:34217097-34217237 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001024.4
CCTTTCTCTCTCGCGCGCGGTGTGGTGGCAGCAGGCGCAGCCCAGCCTCGAAATGCAGAACGACGCCGGCGAGTTCGTGGACCTGTACGTGCCGCGGAAATGCTCCGCTAGCAATCGCATCATCGGTGCCAAGGACCACGCATCCATCCAGATGAACGTGGCCGAGGTTGACAAGGTCACAGGCAGGTTTAATGGCCAGTTTAAAACTTATGCTATCTGCGGGGCCATTCGTAGGATGGGTGAGTCAGATGATTCCATTCTCCGATTGGCCAAGGCCGATGGCATCGTCTCAAAGAACTTTTGACTGGAGAGAATCACAGATGTGGAATATTTGTCATAAATAAATAATGAAAACCTA