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Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS29
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S29
Also known as DBA13|S29|uS14
Coordinate chr14:49570988-49598710
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit and a member of the S14P family of ribosomal proteins. The protein, which contains a C2-C2 zinc finger-like domain that can bind to zinc, can enhance the tumor suppressor activity of Ras-related protein 1A (KREV1). It is located in the cytoplasm. Variable expression of this gene in colorectal cancers compared to adjacent normal tissues has been observed, although no correlation between the level of expression and the severity of the disease has been found. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2013]

Retrocopy(s) from RPS29

Retroname Coord Strand Genomic Region ENSG
RPS29P19 chr11:113751037-113751303 - Intragenic
ENSG00000243353 UCSC
RPS29P35 chr1:111542104-111542308 - Intragenic
N/A UCSC
RPS29P20 chr11:4018917-4019194 + Intragenic
ENSG00000240385 UCSC
RPS29P4 chr1:175297051-175297324 + Intergenic
ENSG00000233946 UCSC
RPS29P5 chr1:175921943-175922231 + Intergenic
ENSG00000230777 UCSC
RPS29P34 chr1:31050853-31051036 + Intragenic
ENSG00000232768 UCSC
RPS29P6 chr1:37330818-37330968 + Intergenic
ENSG00000230451 UCSC
RPS29P7 chr1:65154445-65154730 + Intragenic
ENSG00000231622 UCSC
RPS29P22 chr17:28116157-28116431 - Intragenic
Intragenic
ENSG00000240873 UCSC
RPS29P37 chr17:35603822-35604017 + Intragenic
N/A UCSC
RPS29P21 chr17:59912166-59912417 + Intragenic
ENSG00000241913 UCSC
RPS29P23 chr19:12373608-12373812 + Intergenic
ENSG00000231361 UCSC
RPS29P8 chr2:148595133-148595415 + Intergenic
ENSG00000232238 UCSC
RPS29P9 chr2:207654769-207655032 + Intergenic
ENSG00000223433 UCSC
RPS29P10 chr2:61589406-61589696 - Intergenic
ENSG00000226884 UCSC
RPS29P3 chr3:196536500-196536789 + Intergenic
ENSG00000225770 UCSC
RPS29P11 chr4:25678817-25679109 + Intergenic
ENSG00000242640 UCSC
RPS29P12 chr5:180945821-180945987 + Intragenic
ENSG00000243664 UCSC
RPS29P15 chr7:100928338-100928595 + Intergenic
ENSG00000235926 UCSC
RPS29P16 chr7:103348570-103348859 + Intragenic
ENSG00000235354 UCSC
RPS29P14 chr7:33036128-33036413 - Intragenic
ENSG00000229054 UCSC
RPS29P33 chr9:17096224-17096446 - Intergenic
ENSG00000226470 UCSC
RPS29P17 chr9:35592754-35593044 + Intergenic
ENSG00000227852 UCSC
RPS29P36 chr9:87525271-87525564 + Intragenic
ENSG00000219928 UCSC

Expression

Transcript Sequences

>NM_001032.5
CTTCCTTTTACCTCGTTGCACTGCTGAGAGCAAGATGGGTCACCAGCAGCTGTACTGGAGCCACCCGCGAAAATTCGGCCAGGGTTCTCGCTCTTGTCGTGTCTGTTCAAACCGGCACGGTCTGATCCGGAAATATGGCCTCAATATGTGCCGCCAGTGTTTCCGTCAGTACGCGAAGGATATCGGTTTCATTAAGTTGGACTAAATGCTCTTCCTTCAGAGGATTATCCGGGGCATCTACTCAATGAAAAACCATGATAATTCTTTGTATATAAAATAAACATTTGAAAAAACC