Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hspd1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name heat shock protein family D (Hsp60) member 1
Also known as Hsp60|Hspd1-30p
Coordinate chr9:61680529-61691202
Strand -
Gene summary Enables modification-dependent protein binding activity. Involved in several processes, including negative regulation of apoptotic process; positive regulation of cytokine production; and response to ischemia. Located in several cellular components, including mitochondrial crista; peroxisomal matrix; and zymogen granule. Used to study Alzheimer's disease and low tension glaucoma. Biomarker of several diseases, including artery disease (multiple); hydrocephalus; hyperglycemia; pulmonary fibrosis; and varicocele. Human ortholog(s) of this gene implicated in artery disease (multiple); autistic disorder; glucose intolerance; hereditary spastic paraplegia (multiple); and hypomyelinating leukodystrophy 4. Orthologous to human HSPD1 (heat shock protein family D (Hsp60) member 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hspd1

Retroname Coord Strand Genomic Region ENSG
Hspd1P1 chr1:109638690-109641191 - Intergenic
N/A UCSC
Hspd1P2 chr1:190138455-190140632 - Intragenic
Intragenic
N/A UCSC
Hspd1P3 chr2:152514385-152515319 - Intergenic
N/A UCSC
Hspd1P4 chr2:242031006-242033203 + Intragenic
N/A UCSC
Hspd1P5 chr2:63341770-63342490 + Intergenic
N/A UCSC
Hspd1P6 chr4:31145827-31146447 + Intragenic
N/A UCSC
Hspd1P7 chr4:38935448-38936360 + Intragenic
N/A UCSC
Hspd1P9 chr5:109941034-109941650 + Intergenic
N/A UCSC
Hspd1P10 chr5:76055004-76056809 - Intergenic
N/A UCSC
Hspd1P11 chr6:20448650-20450772 + Intergenic
N/A UCSC
Hspd1P12 chr6:80421702-80422479 - Intergenic
N/A UCSC
Hspd1P13 chr7:13143612-13144463 + Intergenic
N/A UCSC
Hspd1P14 chr9:51645325-51646434 + Intergenic
N/A UCSC
Hspd1P15 chr9:54226201-54227386 - Intragenic
N/A UCSC
Hspd1P16 chr9:55111968-55112622 - Intergenic
N/A UCSC
Hspd1P17 chr13:16670843-16673051 + Intergenic
N/A UCSC
Hspd1P18 chr14:111139613-111140924 + Intergenic
N/A UCSC
Hspd1P19 chr14:29232224-29232485 - Intergenic
N/A UCSC
Hspd1P20 chr14:41592935-41595154 + Intergenic
N/A UCSC
Hspd1P21 chr14:61955684-61957904 + Intragenic
N/A UCSC
Hspd1P22 chr15:17534286-17535079 + Intergenic
N/A UCSC
Hspd1P23 chr15:8244895-8246173 + Intergenic
N/A UCSC
Hspd1P24 chr16:76633311-76633609 + Intergenic
N/A UCSC
Hspd1P25 chr17:53032036-53035704 + Intergenic
N/A UCSC
Hspd1P27 chr20:52774988-52776081 - Intergenic
N/A UCSC
Hspd1P28 chrX:133324380-133325225 + Intergenic
N/A UCSC
Hspd1P29 chrX:65638394-65640217 + Intragenic
N/A UCSC
Hspd1P30 chrX:93434150-93435601 + Intergenic
N/A UCSC
Hspd1P8 chr5:107966685-107968176 - Intergenic
N/A UCSC
Hspd1P26 chr20:33033250-33035498 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_022229.2
CTCACTCGCCGCAGACGGCCTGCCTCGCCTCGTGCTCTTCCGCCGCCGCCCCGCAGAAATGCTTCGACTACCCACAGTCCTTCGCCAGATGAGACCAGTGTCTCGGGCACTGGCTCCTCATCTCACTCGGGCCTATGCCAAAGATGTAAAATTTGGTGCGGATGCTCGAGCCTTAATGCTTCAAGGTGTAGACCTTTTAGCCGATGCTGTAGCTGTTACAATGGGGCCAAAGGGAAGAACAGTGATTATTGAACAGAGTTGGGGAAGTCCCAAAGTAACAAAAGATGGGGTCACTGTTGCAAAGTCAATTGATTTAAAGGATAAATACAAAAATATCGGAGCTAAGCTTGTTCAGGATGTTGCCAATAACACAAATGAAGAGGCTGGGGATGGCACCACCACTGCCACTGTTCTGGCACGGTCTATTGCCAAGGAGGGCTTTGAGAAGATCAGCAAAGGGGCTAATCCAGTGGAAATCCGGAGAGGTGTGATGTTGGCTGTTGATGCTGTAATTGCTGAACTTAAGAAACAATCTAAACCTGTGACAACCCCTGAAGAAATTGCTCAGGTTGCTACAATTTCTGCAAACGGAGACAAAGACATTGGGAACATCATTTCTGATGCAATGAAGAAGGTTGGAAGAAAGGGTGTCATCACAGTGAAGGATGGAAAAACCCTGAATGATGAGCTAGAAATTATTGAAGGCATGAAGTTTGATAGAGGATATATTTCCCCATATTTTATTAACACATCAAAAGGTCAAAAATGTGAATTCCAAGATGCCTATGTTTTGTTGAGTGAAAAGAAAATTTCTAGTGTTCAGTCCATTGTACCTGCTCTTGAAATTGCCAATGCTCACCGGAAGCCCTTGGTCATAATTGCTGAAGATGTTGATGGAGAAGCTCTTAGCACACTGGTTTTGAACAGGCTAAAAGTTGGTCTTCAGGTTGTAGCAGTCAAAGCTCCAGGGTTTGGGGACAACAGGAAGAACCAGCTTAAAGATATGGCTATCGCTACTGGTGGTGCGGTGTTTGGAGAAGAGGGTTTGAATCTAAATCTTGAAGATGTTCAAGCTCATGATTTAGGGAAAGTTGGAGAGGTCATCGTCACCAAAGATGATGCCATGCTTTTGAAAGGAAAAGGTGACAAAGCTCACATTGAAAAACGTATTCAAGAAATCACTGAGCAGCTAGACATCACAACTAGTGAATATGAGAAGGAAAAGCTGAACGAGCGACTTGCTAAACTCTCAGATGGAGTAGCTGTGTTGAAGGTTGGAGGGACAAGTGATGTTGAAGTGAATGAGAAGAAAGACAGAGTTACAGATGCTCTCAATGCTACAAGAGCAGCTGTTGAAGAAGGCATTGTTCTAGGAGGGGGCTGTGCTCTACTTCGGTGCATCCCAGCCTTGGATTCATTAAAGCCTGCTAATGAAGATCAGAAGATAGGTATAGAAATTATTAAAAGAGCACTTAAAATTCCTGCAATGACAATTGCTAAGAATGCAGGTGTTGAAGGATCTTTGATAGTTGAAAAAATTCTGCAGAGTTCCTCAGAGGTTGGCTATGATGCCATGCTTGGAGATTTTGTGAACATGGTGGAAAAGGGAATCATTGATCCAACAAAGGTTGTAAGAACTGCTTTACTGGATGCTGCTGGGGTGGCCTCCCTGCTAACTACAGCCGAAGCTGTAGTGACAGAAATTCCTAAAGAAGAGAAGGACCCTGGAATGGGTGCAATGGGTGGAATGGGAGGGGGTATGGGAGGTGGCATGTTCTAACTCCTAGAATAGTGCTTTGCCCTTATCAATGAACTGTGGCAGGAAGCTCAAGGCAGGTTCCTCACCAATAACTTCAGAGAAGTCACCTGAAGAAAATGACTGAAGAGAAGGCTGGCTGATCACTGTAACCATCAGTTACTGGTTTCCTTTGACAATACATAATGGTTTACTGCTGTCATTGTCCATGCCTACAGATAATTTATTTTGTATTTTTGAATAAAGACATTTGTACATTCCTGATGCTGGGTGCAAGAGCCAGTGTCCTGCTTTCAACTTAAATCACTGAGGCATCTCTACTGTTCTGTTAGCATCAGGACTGTAGCGCTGTGTCACCACATGAGAAGTTCAGAAGCAGCCTTTCTGTGGAGGGTGAGAATGATTGTGTACAGAGTAGAGAAGTATCCAATTATGTGACAACCTTTGTGTAATAAAATTTTGTTTAAAGTT
>XM_006244932.2
GGCCTTCCGGAAGGTTCTAGAACCGAGCGCGGCCCAGGAACCAGTGTACGGCGGCGGGAGAGTGCTGAGGCCACGGGGCTGAGGCCGCTCAGAAATGCTTCGACTACCCACAGTCCTTCGCCAGATGAGACCAGTGTCTCGGGCACTGGCTCCTCATCTCACTCGGGCCTATGCCAAAGATGTAAAATTTGGTGCGGATGCTCGAGCCTTAATGCTTCAAGGTGTAGACCTTTTAGCCGATGCTGTAGCTGTTACAATGGGGCCAAAGGGAAGAACAGTGATTATTGAACAGAGTTGGGGAAGTCCCAAAGTAACAAAAGATGGGGTCACTGTTGCAAAGTCAATTGATTTAAAGGATAAATACAAAAATATCGGAGCTAAGCTTGTTCAGGATGTTGCCAATAACACAAATGAAGAGGCTGGGGATGGCACCACCACTGCCACTGTTCTGGCACGGTCTATTGCCAAGGAGGGCTTTGAGAAGATCAGCAAAGGGGCTAATCCAGTGGAAATCCGGAGAGGTGTGATGTTGGCTGTTGATGCTGTAATTGCTGAACTTAAGAAACAATCTAAACCTGTGACAACCCCTGAAGAAATTGCTCAGGTTGCTACAATTTCTGCAAACGGAGACAAAGACATTGGGAACATCATTTCTGATGCAATGAAGAAGGTTGGAAGAAAGGGTGTCATCACAGTGAAGGATGGAAAAACCCTGAATGATGAGCTAGAAATTATTGAAGGCATGAAGTTTGATAGAGGATATATTTCCCCATATTTTATTAACACATCAAAAGGTCAAAAATGTGAATTCCAAGATGCCTATGTTTTGTTGAGTGAAAAGAAAATTTCTAGTGTTCAGTCCATTGTACCTGCTCTTGAAATTGCCAATGCTCACCGGAAGCCCTTGGTCATAATTGCTGAAGATGTTGATGGAGAAGCTCTTAGCACACTGGTTTTGAACAGGCTAAAAGTTGGTCTTCAGGTTGTAGCAGTCAAAGCTCCAGGGTTTGGGGACAACAGGAAGAACCAGCTTAAAGATATGGCTATCGCTACTGGTGGTGCGGTGTTTGGAGAAGAGGGTTTGAATCTAAATCTTGAAGATGTTCAAGCTCATGATTTAGGGAAAGTTGGAGAGGTCATCGTCACCAAAGATGATGCCATGCTTTTGAAAGGAAAAGGTGACAAAGCTCACATTGAAAAACGTATTCAAGAAATCACTGAGCAGCTAGACATCACAACTAGTGAATATGAGAAGGAAAAGCTGAACGAGCGACTTGCTAAACTCTCAGATGGAGTAGCTGTGTTGAAGGTTGGAGGGACAAGTGATGTTGAAGTGAATGAGAAGAAAGACAGAGTTACAGATGCTCTCAATGCTACAAGAGCAGCTGTTGAAGAAGGCATTGTTCTAGGAGGGGGCTGTGCTCTACTTCGGTGCATCCCAGCCTTGGATTCATTAAAGCCTGCTAATGAAGATCAGAAGATAGGTATAGAAATTATTAAAAGAGCACTTAAAATTCCTGCAATGACAATTGCTAAGAATGCAGGTGTTGAAGGATCTTTGATAGTTGAAAAAATTCTGCAGAGTTCCTCAGAGGTTGGCTATGATGCCATGCTTGGAGATTTTGTGAACATGGTGGAAAAGGGAATCATTGATCCAACAAAGGTTGTAAGAACTGCTTTACTGGATGCTGCTGGGGTGGCCTCCCTGCTAACTACAGCCGAAGCTGTAGTGACAGAAATTCCTAAAGAAGAGAAGGACCCTGGAATGGGTGCAATGGGTGGAATGGGAGGGGGTATGGGAGGTGGCATGTTCTAACTCCTAGAATAGTGCTTTGCCCTTATCAATGAACTGTGGCAGGAAGCTCAAGGCAGGTTCCTCACCAATAACTTCAGAGAAGTCACCTGAAGAAAATGACTGAAGAGAAGGCTGGCTGATCACTGTAACCATCAGTTACTGGTTTCCTTTGACAATACATAATGGTTTACTGCTGTCATTGTCCATGCCTACAGATAATTTATTTTGTATTTTTGAATAAAGACATTTGTACATTCCTGATGCTGGGTGCAAGAGCCAGTGTCCTGCTTTCAACTTAAATCACTGAGGCATCTCTACTGTTCTGTTAGCATCAGGACTGTAGCGCTGTGTCACCACATGAGAAGTTCAGAAGCAGCCTTTCTGTGGAGGGTGAGAATGATTGTGTACAGAGTAGAGAAGTATCCAATTATGTGACAACCTTTGTGTAATAAAATTTTGTTTAAAGTTC