Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name MRPS5
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein S5
Also known as MRP-S5|S5mt
Coordinate chr2:95085369-95122003
Strand -
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein that belongs to the ribosomal protein S5P family. Pseudogenes corresponding to this gene are found on chromosomes 4q, 5q, and 18q. [provided by RefSeq, Jul 2008]

Retrocopy(s) from MRPS5

Retroname Coord Strand Genomic Region ENSG
MRPS5P4 chr18:60519851-60524436 + Intergenic
ENSG00000266915 UCSC
MRPS5P5 chr4:163265426-163266573 - Intergenic
ENSG00000250547 UCSC

Expression

Transcript Sequences

>NM_001321997.2
AGGCGCCCGCGGGGCTGTCCGCGGTCGCGCCGGGCTCCGCCTGCAGTGTGGCCCGTCCGGACAGTCCCTCACCCCGGCCTGCGCTGCTGCGTGGACTCGGGCCTCAGGAATTCCGCTGCGGCCCAAGGCTTGCCGTTTGACGAGGAGCAGTCGCGGTAGGCGGTGGGCAAGGCTGCCCTGGGCGGAGGCCGAGGCGCGGCTCGGACTCCAGCATGGCGACCGCGGTGCGCGCTGTGGGCTGCCTCCCCGTGCTGTGTAGCGGGACGGCAGGTGAGAGCTGGGACGCCGGGAGCAGGGGCTCTGAGCGGGCCGGGAGTGGGGGGCTCGCCTGGGGCCTGCAGAAGTCGGGGCGGAGGGAAGCGAGAAGCCGCGGCCCCCGGCTCTTCACGCCGTGCCCCCACCTTCCGCCGGAGCCgctgtgtgaccttgcgcgcgtcctctccctctctgggtcgcggagctcttgtctgtaaaatgagggggaactggacgtcgttcttcagggttcttcccagttcACGAAACCGCTTGAGCGTGCTTGGCGAAGAGGAGCGGAAACTGGTCATTTATTGGGGAGGCAGTGTTCCCTAAACACCTTACCAGCAGCTTCCATTTTGGCATGGAAGAGTGTTCTCGGCAATGGCCATTTGTCATCACTGGGAACCAGAGACACCCATCCCTACGCCAGCTTGAGCCGTGCACTGCAGACACAATGCTGTATTTCTTCTCCCAGTCACCTGATGAGCCAGCAGTATAGACCATATAGTTTCTTCACTAAATTGACTGCAGATGAGCTGTGGAAAGGCGCTTTAGCAGAGACTGGTGCTGGAGCAAAAAAAGGAAGAGGCAAAAGAACTAAAAAGAAGAAAAGAAAGGATCTGAACAGGGGTCAGATCATTGGTGAAGGGCGTTATGGTTTTCTATGGCCCGGACTGAATGTCCCTCTTATGAAAAATGGAGCAGTGCAGACCATTGCCCAAAGAAGCAAGGAAGAGCAGGAGAAGGTGGAGGCAGACATGATCCAGCAGAGAGAAGAGTGGGACCGAAAGAAGAAGATGAAGAAACATATGAGGATTTTGATACCAGGATACTTGAGGTAAGAAACGTTTTCACTATGACTGCGAAAGAGGGAAGAAAGAAATCGATCCGTGTCTTGGTGGCTGTGGGGAACGGAAAAGGAGCTGCAGGTTTTTCTATTGGGAAAGCTACTGATCGGATGGATGCTTTCAGGAAAGCAAAGAACAGAGCAGTTCACCATTTGCATTATATAGAACGATATGAAGACCATACAATATTCCATGATATTTCATTAAGATTTAAAAGGACGCATATCAAGATGAAGAAACAACCCAAAGGTTACGGCCTCCGCTGCCACAGGGCCATCATCACCATCTGCCGGCTCATTGGCATCAAAGACATGTATGCCAAGGTCTCTGGGTCCATTAATATGCTCAGCCTCACCCAGGGCCTCTTCCGTGGGCTCTCCAGACAGGAAACCCATCAACAGCTGGCTGATAAGAAGGGCCTCCATGTTGTGGAAATCCGGGAGGAATGTGGCCCTCTGCCCATTGTGGTTGCGTCCCCCCGGGGGCCCTTGAGGAAGGATCCAGAGCCAGAAGATGAGGTTCCAGACGTCAAACTGGACTGGGAAGATGTGAAGACTGCACAGGGAATGAAGCGCTCTGTGTGGTCTAATTTGAAGAGAGCCGCCACGTAACCTCTCTGGCCTTGTGCAGCCAGTTCCTGTGCTGCCCTGCACCTAGGAGAGACTCAGCCCCTCACAGCTTGGGATGTTACCTTGCCTTTTGTTTGTTTTGAGGGAAGTTTAATCTTTAAACTCTTTGGAAATAaataattatagctttcatttgttgagcacatgttatatgccaatgtgatagaacctttacatacatatctcagttCAAGACTACTTTAAATATTCATCCAAAGTAACAAAAGTAAATGAATTAGGGAGACGGGGTTAATAATTTGACCCAATCAGTAATAATGTACACAATGATAATTGCTGTAGTAATTATAGCTAATATATATGAACTCATTCATCCAAAGTGAATGTGATTAACTTCATTTTACAGAGCAGTTAAGTAACTTGACTACCGtgaggaacttccaaaccgttttccacagtggaaatggaagttgtaggctactattgggaatgttaaatggtatattaattgtataccattgcaattttgacttgtatttccctgatggctgatgatgttgaacatcttttcatgtgctgattggccatttgtatatgttttttggagaaatgtctattcagagcctttgcccatttaaaaagttattttttattattattgagttccttatagtttctagatataagcccccctatcatacatgctttacagaagtttttacccattctgtggaatatatatatttttatttctttgcatactctttctgccccacccacatcctctttctgggacactgatgaccaaaatgttgaatcttttactattgtcccgtgagtccctgaggcgctgtttattttttttccagtctgttttctctgtgttgctcagtttaggtaatttctattgttttatcttcagaataactggttatttactctttcctttccattctgctcttgaaccatccatgcagtactttaactttgactgtcattgtatatttcagttaaaatttccatttggtttattttttatgtcttctctttatttgctgaggctatttgctgagactttttttttctttaaatggcttcaagagtgtttataattgctcactgaagcatttttatggtggctgctttaaaatctttgtcatcaggtaggtgtggtggctcacgcctataaccccagcactttgtgaaggtgaggcaggaggattgcttcagcccaggagtttgagatcagcctaggcaacaaagtgagacctcatctctacaaaaagtaaaagtaaatttaaaagttagacacacatggtggtgtatgcctgtagtcccagctacataggaggctgaagtgggaggatcatttgattgcaggaggttgaggctgcagtgagccttgttcatgccactccagcctgggtggcagagtgagaccttgtctccaaaaaaaaaaaaaaaattgtcataaagtttcaacatctgtgtcatcttagtgttgacatcccttgaggttttttctcattcaagtttacaatgtcctagttcttgttatgatgagtgactttggctgtatcctggtcatcttcactgttatgaagctctgggagttatttaaatctctcagcatgcttcctctgacggtgctggtatgggatggggcactgcctcgttactgcctggtgaggatggagatccaggtttccTCCTGTCGCTGTCCTCGGGACCTCTGCTGAGGCCTTTCTGCTGGAAGTAGGAGGAGCACCCTAATGGCACCGTGGGATAGGGAGCAGGCCATGTTAGGCTGGATGGTGAAAGTTTTCAGCCTGTGACGTTGTCTGGTGTGGGTGGGTCCCCTTTTTTTGTGTGTGGTATTTTGCTAGAGTAAGGTAGTTATTTCCTAAAACTTATCTGTCCTGTTAGTTTTCCTTCTTAAGTACCTAACAAATATAaagacaatgaactttaagcaataaaagacaatgatcctttggagaggggaaacaaaa
>NM_031902.5
GCGGCTCGGACTCCAGCATGGCGACCGCGGTGCGCGCTGTGGGCTGCCTCCCCGTGCTGTGTAGCGGGACGGCAGGTCATTTATTGGGGAGGCAGTGTTCCCTAAACACCTTACCAGCAGCTTCCATTTTGGCATGGAAGAGTGTTCTCGGCAATGGCCATTTGTCATCACTGGGAACCAGAGACACCCATCCCTACGCCAGCTTGAGCCGTGCACTGCAGACACAATGCTGTATTTCTTCTCCCAGTCACCTGATGAGCCAGCAGTATAGACCATATAGTTTCTTCACTAAATTGACTGCAGATGAGCTGTGGAAAGGCGCTTTAGCAGAGACTGGTGCTGGAGCAAAAAAAGGAAGAGGCAAAAGAACTAAAAAGAAGAAAAGAAAGGATCTGAACAGGGGTCAGATCATTGGTGAAGGGCGTTATGGTTTTCTATGGCCCGGACTGAATGTCCCTCTTATGAAAAATGGAGCAGTGCAGACCATTGCCCAAAGAAGCAAGGAAGAGCAGGAGAAGGTGGAGGCAGACATGATCCAGCAGAGAGAAGAGTGGGACCGAAAGAAGAAGATGAAGGTTAAACGGGAGCGAGGATGGAGTGGAAACTCATGGGGAGGCATCAGTCTTGGCCCCCCTGACCCTGGTCCCTGTGGAGAAACATATGAGGATTTTGATACCAGGATACTTGAGGTAAGAAACGTTTTCACTATGACTGCGAAAGAGGGAAGAAAGAAATCGATCCGTGTCTTGGTGGCTGTGGGGAACGGAAAAGGAGCTGCAGGTTTTTCTATTGGGAAAGCTACTGATCGGATGGATGCTTTCAGGAAAGCAAAGAACAGAGCAGTTCACCATTTGCATTATATAGAACGATATGAAGACCATACAATATTCCATGATATTTCATTAAGATTTAAAAGGACGCATATCAAGATGAAGAAACAACCCAAAGGTTACGGCCTCCGCTGCCACAGGGCCATCATCACCATCTGCCGGCTCATTGGCATCAAAGACATGTATGCCAAGGTCTCTGGGTCCATTAATATGCTCAGCCTCACCCAGGGCCTCTTCCGTGGGCTCTCCAGACAGGAAACCCATCAACAGCTGGCTGATAAGAAGGGCCTCCATGTTGTGGAAATCCGGGAGGAATGTGGCCCTCTGCCCATTGTGGTTGCGTCCCCCCGGGGGCCCTTGAGGAAGGATCCAGAGCCAGAAGATGAGGTTCCAGACGTCAAACTGGACTGGGAAGATGTGAAGACTGCACAGGGAATGAAGCGCTCTGTGTGGTCTAATTTGAAGAGAGCCGCCACGTAACCTCTCTGGCCTTGTGCAGCCAGTTCCTGTGCTGCCCTGCACCTAGGAGAGACTCAGCCCCTCACAGCTTGGGATGTTACCTTGCCTTTTGTTTGTTTTGAGGGAAGTTTAATCTTTAAACTCTTTGGAAATAaataattatagctttcatttgttgagcacatgttatatgccaatgtgatagaacctttacatacatatctcagttCAAGACTACTTTAAATATTCATCCAAAGTAACAAAAGTAAATGAATTAGGGAGACGGGGTTAATAATTTGACCCAATCAGTAATAATGTACACAATGATAATTGCTGTAGTAATTATAGCTAATATATATGAACTCATTCATCCAAAGTGAATGTGATTAACTTCATTTTACAGAGCAGTTAAGTAACTTGACTACCGtgaggaacttccaaaccgttttccacagtggaaatggaagttgtaggctactattgggaatgttaaatggtatattaattgtataccattgcaattttgacttgtatttccctgatggctgatgatgttgaacatcttttcatgtgctgattggccatttgtatatgttttttggagaaatgtctattcagagcctttgcccatttaaaaagttattttttattattattgagttccttatagtttctagatataagcccccctatcatacatgctttacagaagtttttacccattctgtggaatatatatatttttatttctttgcatactctttctgccccacccacatcctctttctgggacactgatgaccaaaatgttgaatcttttactattgtcccgtgagtccctgaggcgctgtttattttttttccagtctgttttctctgtgttgctcagtttaggtaatttctattgttttatcttcagaataactggttatttactctttcctttccattctgctcttgaaccatccatgcagtactttaactttgactgtcattgtatatttcagttaaaatttccatttggtttattttttatgtcttctctttatttgctgaggctatttgctgagactttttttttctttaaatggcttcaagagtgtttataattgctcactgaagcatttttatggtggctgctttaaaatctttgtcatcaggtaggtgtggtggctcacgcctataaccccagcactttgtgaaggtgaggcaggaggattgcttcagcccaggagtttgagatcagcctaggcaacaaagtgagacctcatctctacaaaaagtaaaagtaaatttaaaagttagacacacatggtggtgtatgcctgtagtcccagctacataggaggctgaagtgggaggatcatttgattgcaggaggttgaggctgcagtgagccttgttcatgccactccagcctgggtggcagagtgagaccttgtctccaaaaaaaaaaaaaaaattgtcataaagtttcaacatctgtgtcatcttagtgttgacatcccttgaggttttttctcattcaagtttacaatgtcctagttcttgttatgatgagtgactttggctgtatcctggtcatcttcactgttatgaagctctgggagttatttaaatctctcagcatgcttcctctgacggtgctggtatgggatggggcactgcctcgttactgcctggtgaggatggagatccaggtttccTCCTGTCGCTGTCCTCGGGACCTCTGCTGAGGCCTTTCTGCTGGAAGTAGGAGGAGCACCCTAATGGCACCGTGGGATAGGGAGCAGGCCATGTTAGGCTGGATGGTGAAAGTTTTCAGCCTGTGACGTTGTCTGGTGTGGGTGGGTCCCCTTTTTTTGTGTGTGGTATTTTGCTAGAGTAAGGTAGTTATTTCCTAAAACTTATCTGTCCTGTTAGTTTTCCTTCTTAAGTACCTAACAAATATAaagacaatgaactttaagcaataaaagacaatgatcctttggagaggggaaacaaaa