Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ppih
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name peptidyl prolyl isomerase H
Also known as 1100001J08Rik|2010111B15Rik|4833408F11Rik|CYP-20|CYPH|D4Wsu43e
Coordinate chr4:119157207-119177720
Strand -
Gene summary Predicted to enable cyclosporin A binding activity; peptidyl-prolyl cis-trans isomerase activity; and ribonucleoprotein complex binding activity. Predicted to be involved in positive regulation of viral genome replication; protein folding; and protein peptidyl-prolyl isomerization. Predicted to be located in nuclear speck. Predicted to be part of U4/U6 snRNP and U4/U6 x U5 tri-snRNP complex. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Is expressed in several structures, including central nervous system; extraembryonic component; and retina. Orthologous to human PPIH (peptidylprolyl isomerase H). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ppih

Retroname Coord Strand Genomic Region ENSG
PpihP5 chr11:102014877-102015483 + Intergenic
ENSMUSG00000082045 UCSC
PpihP7 chr12:3981321-3982054 - Intergenic
ENSMUSG00000112271 UCSC
PpihP6 chr12:108956862-108957598 - Intragenic
ENSMUSG00000113478 UCSC
PpihP8 chr17:9640577-9641297 - Intergenic
ENSMUSG00000101935 UCSC
PpihP2 chr6:128449623-128450366 - Intergenic
ENSMUSG00000107896 UCSC
PpihP4 chr8:44182255-44183004 - Intergenic
ENSMUSG00000110036 UCSC
PpihP9 chrX:145434855-145435137 - Intragenic
Intragenic
ENSMUSG00000084147 UCSC
PpihP1 chr5:44070493-44071241 + Intergenic
ENSMUSG00000033036 UCSC
PpihP3 chr6:93905837-93905998 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001110130.1
TCGCGGGACCTGCCACCGGAAGCCGGGTTTCTACTTCCGGGTCAAAGCCATGGCGGTGGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCTTCGATGTCAGCATTGGCGGCCAGGAAGTTGGTCGCATGAAAATCGAGCTCTTTGCAGACGTGGTGCCTAAGACGGCAGAGAACTTTAGgCAATTCTGCACCGGAGAGTTCAGAAAAGATGGCGTTCCGATAGGATACAAAGGAAGCACCTTCCACAGGGTCATAAAGGATTTCATGATTCAGGGTGGAGATTTTGTTAATGGCGATGGCACTGGAGTCGCCAGTATTTACCGGGGTCCATTTGCGGATGAAAATTTTAAACTTAGACACTCTGCTCCAGGCCTGCTTTCCATGGCAAACAGTGGTCCCAGTACAAATGGCTGCCAGTTCTTTATCACGTGTTCTAAGTGTGATTGGCTGGATGGAAAGCATGTAGTGTTTGGAAAAATCATTGACGGACTTCTAGTGATGAGGAAGATCGAGTTCCAGGCTCCTTTGGGAAAGAGAGTTCAAGCTTGGACCCATTCATTAACCTGCCCAGCACTTACTGGGATTTTGGCTCTGATCCTGATGCCCACTGAATAAAATTCCACTTCTTGGCATTGCA
>NM_028677.4
TCGCGGGACCTGCCACCGGAAGCCGGGTTTCTACTTCCGGGTCAAAGCCATGGCGGTGGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCTTCGATGTCAGCATTGGCGGCCAGGAAGTTGGTCGCATGAAAATCGAGCTCTTTGCAGACGTGGTGCCTAAGACGGCAGAGAACTTTAGgCAATTCTGCACCGGAGAGTTCAGAAAAGATGGCGTTCCGATAGGATACAAAGGAAGCACCTTCCACAGGGTCATAAAGGATTTCATGATTCAGGGTGGAGATTTTGTTAATGGCGATGGCACTGGAGTCGCCAGTATTTACCGGGGTCCATTTGCGGATGAAAATTTTAAACTTAGACACTCTGCTCCAGGCCTGCTTTCCATGGCAAACAGTGGTCCCAGTACAAATGGCTGCCAGTTCTTTATCACGTGTTCTAAGTGTGATTGGCTGGATGGAAAGCATGTAGTGTTTGGAAAAATCATTGACGGACTTCTAGTGATGAGGAAGATCGAGAATGTTCCCACAGGCCCCAACAATAAGCCCAAACTGCCAGTGGTGATCTCACAGTGTGGGGAAATGTAATCTAGACAAGACGGAACCAGGTCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACTGGCCtctgtgtttgcttccctgtCTCCACAGTATGCGATCCAGGACCTGGAAGTATCACAAACGAGAACCAATCATCCTGTTTACATTTTGGACTGTaaataaaggaattttttttaatgca