Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SUMO2
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name small ubiquitin like modifier 2
Also known as HSMT3|SMT3B|SMT3H2|SUMO3|Smt3A
Coordinate chr17:75165586-75182959
Strand -
Gene summary This gene encodes a protein that is a member of the SUMO (small ubiquitin-like modifier) protein family. It functions in a manner similar to ubiquitin in that it is bound to target proteins as part of a post-translational modification system. However, unlike ubiquitin which targets proteins for degradation, this protein is involved in a variety of cellular processes, such as nuclear transport, transcriptional regulation, apoptosis, and protein stability. It is not active until the last two amino acids of the carboxy-terminus have been cleaved off. Numerous pseudogenes have been reported for this gene. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008]

Retrocopy(s) from SUMO2

Retroname Coord Strand Genomic Region ENSG
SUMO2P22 chr1:27311142-27312032 + Intergenic
ENSG00000243659 UCSC
SUMO2P2 chr9:23632060-23632945 + Intergenic
ENSG00000227607 UCSC
SUMO2P28 chr14:34920874-34921033 + Intergenic
ENSG00000258493 UCSC
SUMO2P23 chr1:43743471-43744202 + Intragenic
ENSG00000233674 UCSC
SUMO2P15 chr15:40760559-40761062 + Intergenic
ENSG00000271236 UCSC
SUMO2P29 chr15:53837339-53837529 - Intergenic
ENSG00000259301 UCSC
SUMO2P17 chr17:48874290-48875288 - Intergenic
ENSG00000248278 UCSC
SUMO2P7 chr17:50235748-50237057 + Intergenic
ENSG00000249838 UCSC
SUMO2P30 chr18:47136957-47137873 + Intragenic
ENSG00000267800 UCSC
SUMO2P10 chr3:33077093-33078079 + Intergenic
ENSG00000235424 UCSC
SUMO2P24 chr4:76668051-76669320 + Intragenic
N/A UCSC
SUMO2P6 chr5:174561690-174562659 + Intergenic
ENSG00000249031 UCSC
SUMO2P4 chr5:69067222-69069325 - Intergenic
ENSG00000249183 UCSC
SUMO2P25 chr5:78753602-78755071 + Intragenic
ENSG00000254310 UCSC
SUMO2P8 chr6:108617400-108618393 - Intragenic
ENSG00000228976 UCSC
SUMO2P12 chr6:12319455-12320217 + Intergenic
ENSG00000218893 UCSC
SUMO2P26 chr6:138878860-138879282 - Intragenic
ENSG00000220600 UCSC
SUMO4 chr6:149400313-149401276 + Intergenic
ENSG00000177688 UCSC
SUMO2P13 chr6:17581975-17582859 + Intergenic
ENSG00000218359 UCSC
SUMO2P1 chr6:29635453-29636468 - Intergenic
ENSG00000235238 UCSC
SUMO2P27 chr7:153143710-153144613 - Intergenic
ENSG00000224104 UCSC
SUMO2P3 chr7:55732029-55733013 + Intergenic
ENSG00000224971 UCSC
SUMO2P19 chr8:102241876-102242192 - Intergenic
ENSG00000253328 UCSC
SUMO2P16 chr8:31130632-31131744 - Intragenic
ENSG00000253579 UCSC
SUMO2P20 chr8:69986815-69987753 - Intergenic
ENSG00000253721 UCSC
SUMO2P18 chr8:97857201-97858224 - Intergenic
ENSG00000253639 UCSC
SUMO2P21 chrX:115718339-115719354 - Intergenic
ENSG00000228532 UCSC

Expression

Transcript Sequences

>NM_001005849.2
CTCTCCCCTCGTCCACCGCTGCCGCCTCCTTCTTCTGCCGCTCCTGGTGCTGCTTGTGTGCTCGTTTGGTGCGGACCTGGTACCTCTTTTGTGAAGCGGCAGCTGAGGAGACTCCGGCGCTCGCCATGGCCGACGAAAAGCCCAAGGAAGGAGTCAAGACTGAGAACAACGATCATATTAATTTGAAGGTGGCGGGGCAGGATGGTTCTGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTTAGTAAACTAATGAAAGCCTATTGTGAACGACAGTTGGAAATGGAGGATGAAGATACAATTGATGTGTTCCAACAGCAGACGGGAGGTGTCTACTGAAAAGGGAACCTGCTTCTTTACTCCAGAACTCTGTTCTTTAAAGACCAAGATTACATTCTCAATTAGAAAACTGCAATTTGGTTCCACCACATCCTGACTACTACCGTATAGTTTTCTCTATTCTTTCATTTCCCCCTTCCCCATTCCTTTATTGTACATAAAGTAACTGGTATATGTGCACAAGCATATTGCATTTTTTTTTTTTTTAACTAAACAGCCAATGGTATGTTTTGATTGACATCAAGTGGAGACGGGATGGGGAAAAATACTGATTCTGTGAAAATACCCCCTTTCTCCATTAGTGGCATGCTCATTCAGCTCTTATCTTTATATTCCAGTAAGTTATTTTGCTCTCACTGTTTTaacaaaaaaaaaaaacaacaacataaaaaTCCTTGCATACCTTGTTCAATTGGAGAATTTTAATGTTTTTCATTTATCATTGTAAAACCAAGGACAATTTTATAACTTTTTTGTACGTAGCTGTTACATGTAGGGCAATCTGTCTTTAAGTAGGGATAAATTACTCTAAAACAAAAAAGAATCCTAGATAGTTTTCCCTTCAAGTCAAGCGTCTTGTTGTTTAAATAAACTTCTTGTTTAAAATGAGCTGTTTTCTTTATTCTGAGAAATATTAAATAGAAAATTGAGGCTTAGAAAAAACATAAATAGGCCTGCTTAGAAGTAACATTTCAAGAAGGAAATAAAGCTACTTGGTGTTTCTGACAGACTGATACTGATGCCAAACAAAGAATAACAGTTTTATAAATATCACCTTGTTCCAAAAGTTTCTCTAGGTCCCATGTTAATATGCAAGTATACTAGCAGAAAAATTGGGCCATAGTATCGTGGATTTCCAGGTATTTTCTGTATATTAAGTGAGGCACGGAGCATAGGGTATAGGGTAGCACATGTGGCAAGGAAAAAGTTCTGATTTTGCCTTTGTTGCTGATAAAACACTGAACCATTCTAGCCTGCACTTATCATAAGTAAATACTCCCTAACCTAAAATAAAGTTTTCGTTCCTTATTCAAGGAttttttttttgagacggagttttcctcttgttgcccaggctggagtgtagtggtgcaatttcagctcactgcaacctcagcctcctgagtagctggggggtcataggtgcatgccaccacgcccagctaattttttttctatttttagtcgagacagggttttatcacgtatgccaggctggtctcgaactcctgaccttaggtgatccacccgcctcagcctcccaaagtgcagggattacggcatgagccaccacgcctggccTATTCAAGAATATTGAGGGACAGAAAATATCTATATATATCCATCCTCAGAACCTTAAATATACAGGTCACTACAGTCTTTATTATTTTAATTTTTGTTTCTTAGGGTTTCTTTTGGTGGTGGttttttgagatggagcatcattccgtctcccaggctgtagtgcagtggcacaatcttggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgtcttaggtctttttgaaagaggttatgcctctgttgcctagtctggagtggtgcaatggtgtgatcttggctcactgcaacctccacctccaggtcttaagagatcctccctgctcagcctcgtgagtagctagaaccgcaggtgcatgccaccacagctaattcttgtattttttatagagagtgtttcgccatattgtccaggccgggctcaaacccctgatcttaagtgatctatctgccttagcctcccaatgtgctgggtttacaggcgtgagccactatgcccagccCCtttttaattttttaaaaatgtttatttttgagatggagtttcgctcttgttgccccaactggagaccaatgacatgatctcagctcactgcaacctccgcctcccgggttcaactgattctcctccctcagcctccggaaaagctgggattacaagcatctaccatcatacctggctaattctgtatttttagtagagaaggggtttctctatgttggtcaggctggtctccacctcccgacctcaggtgatctgcctgccttggcctcccaaagtgctgagattacaggcttgagccactgtgcccggccaaatttttattatttttaaattagaggtggggtctcaccatgttgaccagtttggtctcgaacttctggcctcagtcccttgtcttggcctcccaaagtgttggggtttcaggtgttagaccccatgcccaaccACTACAGtttttgtttttgtttttgtttttttttcagacggagtcttgctctgtcgcccaggctggagtgcagtggcgcaatcttggctcacggcaagctccacctcccgggttcacgccattctcctgcctcagcctccccagtagctgggactaaaggtgcccgccaccatgcccggctaatttttttgtatttttagtagagacagggcttcaccatgttagccaggctggtctcaaactcctgacctcagttcatccacccgccttggccttccaaagtgctgggattacaggcatgatccactgcgcccggccTCACTGccattttatagatgagaaagccaagttccagaaaagttgtgaAATAGACGGTGACTATAAAACTGGGACTAGAGATAGTATCCTAATGCTTGTTGATTGTTTTTGTCCATACTGATTGTCAACCTACCAATATAATCTACCATCAAGTCA
>NM_006937.4
CTCTCCCCTCGTCCACCGCTGCCGCCTCCTTCTTCTGCCGCTCCTGGTGCTGCTTGTGTGCTCGTTTGGTGCGGACCTGGTACCTCTTTTGTGAAGCGGCAGCTGAGGAGACTCCGGCGCTCGCCATGGCCGACGAAAAGCCCAAGGAAGGAGTCAAGACTGAGAACAACGATCATATTAATTTGAAGGTGGCGGGGCAGGATGGTTCTGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTTAGTAAACTAATGAAAGCCTATTGTGAACGACAGGGATTGTCAATGAGGCAGATCAGATTCCGATTTGACGGGCAACCAATCAATGAAACAGACACACCTGCACAGTTGGAAATGGAGGATGAAGATACAATTGATGTGTTCCAACAGCAGACGGGAGGTGTCTACTGAAAAGGGAACCTGCTTCTTTACTCCAGAACTCTGTTCTTTAAAGACCAAGATTACATTCTCAATTAGAAAACTGCAATTTGGTTCCACCACATCCTGACTACTACCGTATAGTTTTCTCTATTCTTTCATTTCCCCCTTCCCCATTCCTTTATTGTACATAAAGTAACTGGTATATGTGCACAAGCATATTGCATTTTTTTTTTTTTTAACTAAACAGCCAATGGTATGTTTTGATTGACATCAAGTGGAGACGGGATGGGGAAAAATACTGATTCTGTGAAAATACCCCCTTTCTCCATTAGTGGCATGCTCATTCAGCTCTTATCTTTATATTCCAGTAAGTTATTTTGCTCTCACTGTTTTaacaaaaaaaaaaaacaacaacataaaaaTCCTTGCATACCTTGTTCAATTGGAGAATTTTAATGTTTTTCATTTATCATTGTAAAACCAAGGACAATTTTATAACTTTTTTGTACGTAGCTGTTACATGTAGGGCAATCTGTCTTTAAGTAGGGATAAATTACTCTAAAACAAAAAAGAATCCTAGATAGTTTTCCCTTCAAGTCAAGCGTCTTGTTGTTTAAATAAACTTCTTGTTTAAAATGAGCTGTTTTCTTTATTCTGAGAAATATTAAATAGAAAATTGAGGCTTAGAAAAAACATAAATAGGCCTGCTTAGAAGTAACATTTCAAGAAGGAAATAAAGCTACTTGGTGTTTCTGACAGACTGATACTGATGCCAAACAAAGAATAACAGTTTTATAAATATCACCTTGTTCCAAAAGTTTCTCTAGGTCCCATGTTAATATGCAAGTATACTAGCAGAAAAATTGGGCCATAGTATCGTGGATTTCCAGGTATTTTCTGTATATTAAGTGAGGCACGGAGCATAGGGTATAGGGTAGCACATGTGGCAAGGAAAAAGTTCTGATTTTGCCTTTGTTGCTGATAAAACACTGAACCATTCTAGCCTGCACTTATCATAAGTAAATACTCCCTAACCTAAAATAAAGTTTTCGTTCCTTATTCAAGGAttttttttttgagacggagttttcctcttgttgcccaggctggagtgtagtggtgcaatttcagctcactgcaacctcagcctcctgagtagctggggggtcataggtgcatgccaccacgcccagctaattttttttctatttttagtcgagacagggttttatcacgtatgccaggctggtctcgaactcctgaccttaggtgatccacccgcctcagcctcccaaagtgcagggattacggcatgagccaccacgcctggccTATTCAAGAATATTGAGGGACAGAAAATATCTATATATATCCATCCTCAGAACCTTAAATATACAGGTCACTACAGTCTTTATTATTTTAATTTTTGTTTCTTAGGGTTTCTTTTGGTGGTGGttttttgagatggagcatcattccgtctcccaggctgtagtgcagtggcacaatcttggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgtcttaggtctttttgaaagaggttatgcctctgttgcctagtctggagtggtgcaatggtgtgatcttggctcactgcaacctccacctccaggtcttaagagatcctccctgctcagcctcgtgagtagctagaaccgcaggtgcatgccaccacagctaattcttgtattttttatagagagtgtttcgccatattgtccaggccgggctcaaacccctgatcttaagtgatctatctgccttagcctcccaatgtgctgggtttacaggcgtgagccactatgcccagccCCtttttaattttttaaaaatgtttatttttgagatggagtttcgctcttgttgccccaactggagaccaatgacatgatctcagctcactgcaacctccgcctcccgggttcaactgattctcctccctcagcctccggaaaagctgggattacaagcatctaccatcatacctggctaattctgtatttttagtagagaaggggtttctctatgttggtcaggctggtctccacctcccgacctcaggtgatctgcctgccttggcctcccaaagtgctgagattacaggcttgagccactgtgcccggccaaatttttattatttttaaattagaggtggggtctcaccatgttgaccagtttggtctcgaacttctggcctcagtcccttgtcttggcctcccaaagtgttggggtttcaggtgttagaccccatgcccaaccACTACAGtttttgtttttgtttttgtttttttttcagacggagtcttgctctgtcgcccaggctggagtgcagtggcgcaatcttggctcacggcaagctccacctcccgggttcacgccattctcctgcctcagcctccccagtagctgggactaaaggtgcccgccaccatgcccggctaatttttttgtatttttagtagagacagggcttcaccatgttagccaggctggtctcaaactcctgacctcagttcatccacccgccttggccttccaaagtgctgggattacaggcatgatccactgcgcccggccTCACTGccattttatagatgagaaagccaagttccagaaaagttgtgaAATAGACGGTGACTATAAAACTGGGACTAGAGATAGTATCCTAATGCTTGTTGATTGTTTTTGTCCATACTGATTGTCAACCTACCAATATAATCTACCATCAAGTCA