Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Chmp1b2
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name charged multivesicular body protein 1B2
Also known as 2610002M06Rik|8430408J07Rik
Coordinate chrX:106826357-106859940
Strand -
Gene summary Predicted to enable MIT domain binding activity and identical protein binding activity. Predicted to be involved in several processes, including midbody abscission; regulation of cell cycle process; and viral budding via host ESCRT complex. Predicted to be located in endosome membrane; midbody; and nucleoplasm. Predicted to be part of ESCRT III complex and membrane coat. Predicted to be active in multivesicular body. Orthologous to several human genes including CHMP1B (charged multivesicular body protein 1B). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Chmp1b2

Retroname Coord Strand Genomic Region ENSG
2610002M06RikP1 chr10:66585620-66586129 - Intergenic
 N/A UCSC
2610002M06RikP2 chr18:67338652-67339167 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_025921.3
TAGCTCGTGGGACTCCACCCACCACGGGTTCTAAACCGAAACAGGAAGTGGGCTAGGATCCCTCGAAACCCGCTACAACCGCCACCCTCCGCGCGCCCAAGCGACCCACAACTCGCGGGTCCAGCCCCTGTCCCGCGTGttacctgcccctccccctcctcccgccCGGTGAACTCGAGAGATCATGTCGAACATGGAGAAACACTTATTTAACTTGAAGTTTGCTGCAAAAGAACTTAATAGGAATGCCAAGAAGtgtgataaagaagaaaaagctgAAAAGGCCAAGATAAAAAAGGCCATTCAGAAGGGCAATACAGAAGTTGCAAGAATACATGCTGAAAATGCAATCCGTCAGAAAAACCAAGCAATCAATTTCTTGAGAATGAGTGCTAGGGTTGATGCTGTGGCAGCCAGAGTTCAAACTGCAGTAACAATGGGCAAGGTGACAAAATCCATGGCAGGTGTAGTTAAATCTATGGATGCTACATTGAGGAGTATGAACCTTGAGAAGATTTCTGCCTTAATGGACAAATTTGAACATCAGTTTGAAACATTGGATGTTCAGACACAGCAAATGGAAGATACAATGAGTAGCACTACTACCCTTACGACACCACAGaaCCAAGTGGATATGCTGCTCCAGGAAATGGCAGATGAAGCTGGCCTCGATCTCAATATGGAACTACCACAGGGTCAGACAGGGTCTGTTGGTGCAAGTGTTGCTTCTACAGAGCAGGATGAACTGTCACAGAGGCTTGCTCGTCTTCGTGATCAAGTGTAACTTAAATAACTGGTGCTTCTGTTCCTCCACATATTTCTGAgccatcatttgtgtgtgtgtctatagatAAGGTGTATTCCAGTTACAAAAACATCATACATGACAGGATGTTTGGACATCATTTCtataagatgctttcttttgccttgtGTATTTCACAGTGCATTGCGAAATTCCAAGGAATTTCCACATTGGCAGATTTTATAGTTCTATATATTGTGTGTAAAAGTGTGAGGGACATATTTTTCTAGATGTCTTTGGCAAAGCTAGCATTAGTTTTCTGTATATTATACATCTTCCGCAAATATTAGAGCAAACATCTAGCACCAAAGTAATGCTAAGTAAAGTAATTTTGTCAGAATAATGTATAAAGGCTTTGTTTTTACTTATTGAAAGTAACTTTCAATTATTGTCTGTGATGAATTTtgattttgtaaaaataaaaacaggaaagcatGTTCATTTAATATGTTCGCATAACCCAGACCATCTTATTTTAAGTATCACAAGATAGACTATACAATTTCCATGggatttttgaaaattatttctattttgtatgtatggttgttttgcctgcatgttaaATTGTGTACTCacttgtgtgtctggtgcctacagaggccagaagaggacattggattcccCAGGAACTAGAGCTATAGACAATTGGGAGCCAACATGTGGATACTAGAATTCAAACCCATTTCTTCtagaagaccagccagtgctcttaactcctgagccatgtGTCTAGCCTCTGTTTTGTttcgttgctgttgttgttttgcttgtttattttagagacagggcAGAAATATATAGCCCAGAGTTCCCTGAAACTCAGTGAGCCTCCAGCATTGGTCTCTAAGTatataccaccatacccagctcattTTCtatgatttgggggtgggggttgttatGCACATTagttattttttctgtttctatgataaaTAACCGTGCTCAAAAGTGacttatggaagaaagaaagtattTTGGTTTATGGTTCCAGGGAAATGAGGgctccatcatggtggggaggtgTGGCAGCAAGAGCAGGTAGCTGGTACATGTTTAAtgacacacacaaagcagaaagaACAGGCTGCCAGTGTAACAGACCTAGAAGCTCTCAAAGCCAGTGACATACTTCATTTAGTAAGGTTGCATATCTCCATACCTTCTCCATAAGGCACCACCAACTGGGAAACAATTATTCAAGTACATGAGTCTATGGAAAAATGTCTCGTTCAGACCACTGCATTCCTCTCCCTGGCTTCCATAGACTTatggccatatcataatgcaaaatgtatttacTCTGATGCTTAAAGTGCCCATGGTCTTTCTCAATCTCAATACTATTTGAAATTTCAAAGTCCAGCATATCTTGTGAGACTCGAGACAATCTCTAGCCACTGATAAGATCTAAAAGCAAATAATATACTTCCAACATACGATGGCACAGGTTACACATTATCATtttagaagggaggaagggggacatgatgaggaaatactggactaCAGAGAGACTGAAAGCTCACAAGGCATACATATAAGCAAATCCTGTAGCTCTATGTGGGATGTCTGGGACTACTTTCCGAGGGTTTGGATGGCTTAACTCCTCCAGCTTTGCTGCCTGATTTAATAGCTCACTCTCTAGTAACATCTTCTACGttagttacttctctgttgctgcgATTAagcaccatgaccagaagcaatttataaatagaagagtttattttggcttacagttccagagggataagaaaGTGTGCACCATGGCAGGGATGCATGGTAGCAGGATCAGGAAGCCAAGAAATCATGCTTTCTATTATGCTGTACACATGACGCAGAAAGAGCCAGCTGGAAGTGTGGCAAGACACTCCCAATGCCTGTTGCTGGTGGAATAATTCCTCCAACAGAGTTTGTACAATGACCTGTACCATAACCTTCCCAACTGGTGAACAAagtttcaaatatgtgagcctatagGAGACTCATTCAATTCAGAACATTATGTAAAGAGAAACAGAGTAAATATTTACTTGGTTTTAATCCACTGTAAAGTTTAAATCATTATAGTTTTTAGCCAGTAATTTAATGATGACTGTTCATTAATTTTTAAGACCTTTTAATGGACAATTTATTATATAACTAGGAAAATTCTGCAACATTAATCCAAAGTTTGTATTGGGATACCCTAGATATCCATAGAAGAGATTTGATGGACAAAAGTATTTATGACATAAAGAATGTGTTCTCTGTTGGTATGAATTAAATAGTTTCTGTTCTTTTAACTTGAATAAAAAATTGTTAGATTTATTACTACCACTTAGCTCCACAACTAGCTGTTCATTCTTTTATGTTGCAACCATGTCAGActtaccttttaaaatattactatcAGGGCTGTAAAGTTAATACTACCATTTCAAGAGGATCTGCCTTTGTGTCTCAGCAGCACATCAGTTACCTCACAACATCCTGTAAATCTGCCTCCTGGGGATTCAGTGACCTTTCCTGGTTCCCACAGGGTACCTGAACTCATGTGTatagatgcacacagacacacacataatttttaaaataaagatatacTGGACATGGtcacacatacctttaatctcagcactcaggagactgaggctgtgagttccaggccagccgaaGATACATTATGAGACCAcatctcaaaaaatatttgtaaaacattGATGAGGCAGGTAAGATAGTTGAGTAGATataagcacttgccaccaagcctggcaacctgagttcagttcctgtgACCCACATGGTAGATGTAAAGATTTGCtcctgcaaactgtcctctgacctccacacacattccATTGCATGCACacaagttttaaaattagaaactaCATTAATGGACactaagttttatttttcccttcatTTGTTCACTCTTTTATCAATGTAATGAAAATGTACCTCTTAGACTTTATTCCTAAACCAATAACCTAAGCATGTGATGGTATCATTTGGTTGAACATATATACTCAGATACTTAAAACATCTTGTTGCACTTTCCCCTGTTGGATAAAAAGGCTGATGATAATTCTCCATTTCTTTATGTGTCTTAATGCTTAAAGCCATCTGGTTGCCTGTGAACCATTTTAGGTACCATTATGGACTAGGCTATTTTACCTGGTTAATTGATTGCTTACAAATACCACTTGGAGAAGAAGGAATGAGTAACTCTGAGAAGAGATGTGGACTTTAGAAAATTCTCAGGAAGGAGCATCTGTAGTATTGGgagaaagcaaaatgaaatgaTAGACTGGCAGAAGTAAGCTTGCCAGCTTCCTATGGATTAATAATGTTTGTTGCTAATGATGTTGAGATAAACTGAGAAAGCGTGCCATTTAAAAATTCTAATAGgaaatagagagatggctcagagttaagaGTACTGTACGCTCTTGCAgcggacctgggttcagttcccaacacccacatggtggctcacaactgtccaacCCCCCTTTTTAATGTTTATGGGTTTTTGTGCACATATGGTGCATGATATGTGCACTCAGATAtgcatgaataaatattttttgaagttATATTAACTCCTACTATTTTTTCATGGGATGATTTCATAGTGTATTTTTTCACAATCATAATCATTATTTGCCTATTCATTTCTCTAATACTTATTGAGAGTGTACTTGCTATGTGCTATGGCGATTTGGTTTTGAAGATTGAAGGGAGGCAGGGCAAGAAATTCTCAATTAACTACAATTGAAGATACTAAGTGATCTCTACAAGATCAGGCCTAACTCACCTGTGGAGCTGAACTCTAGGATTTTGACTACTTTCTCTGTTGCATAGAATAATGGCATTCATTGTTCACATTGCCACCTACAAACTAAATTATCTTACCTACTTCCAAAAATGGAGAGCATATGAGGAATGGTCAACTCCCTGCATTGTCATGTGTATTCAAAACAAAGTTATTTATCATCTACTGTTGTGGAAAATGTTATTTGggagtttctaccccaccttagatcatttagttcccaaataaaagattCCAAATCTCTATATTTGTAATAAGCTTTGTagtactagagctgggcagatatcaaccctctgtgCTATTTGTTCTACTTCACCATCAGTAATACTGAGACATCACTTGCTCTGTTCTGCCTGgtccactcctactccaacagacTGGCCCTCAGGGCTATGCATCCTTGATTTACCCCCTTGgtgccttcttcctcctctctacaGAAGCCCTGCCTACCATTCTTTTGCCCTGCTACAGGCAATTTTAAATTAAAGTAGCAgggtttgcacaacaaaaactGGTATTTGTGAAAATTCACTTGAGGCAAATAGAccttggggtacagaatttagcattacaatacatagcagcaGACCAATCCTCAACAATTTACTGTATTTCTGATTTTCCACTATTTGGTATTCCTTAGAGATACCTTTCATGAAAATTTCTTTGAAATACACACACTGTATCACCAAATCCTTCAGTATGACCTTATCTAAATTCAGTAACTCAAATGCCTCATTCTaccaaaatatttgaaatataacaaGCCCAAGTAACTTTTGAATGGAGAAGAGATTAACATGGATAAAGTTGGAATGGAATTGGGAGTCTAAGGCTGAGTATTGTGAAAGGAGTGCTTGACATGGCCTTTGGAAAGACGTGGGAGGAATCTGCTGTAGAAAAGTTTTGTCAGTCTCTATGGTACATAGGCTCGGCTTTAGCCCTCATACATGTGATTACTTCAACCTTTGTCAGGGGTCAGCACAATCTGCCTGTTTCATCTTCATCGCCCACACTTGAAAACATcttaatgtctttgtttttcttgtgaGAGAATTAGATCTCAACTATCTCAATATGTTTGACAAGCCTTAGTGTACATTTACACCTGAATTTGACATGTAAATAGCATCTTTGTCAAACTGGAGGGAATGTAAATGATGGATATGTCAGTGCTCAATAAACAGTTCTAGAATGATTATTTGAAA