Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SUPT4H1
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name SPT4 homolog, DSIF elongation factor subunit
Also known as SPT4|SPT4H|SUPT4H|Supt4a
Coordinate chr17:58345178-58352201
Strand -
Gene summary This gene encodes the small subunit of DRB (5,6-dichloro-1-beta-d-ribofuranosylbenzimidazole) sensitivity-inducing factor (DSIF) complex, which regulates mRNA processing and transcription elongation by RNA polymerase II. The encoded protein is localized to the nucleus and interacts with the large subunit (SUPT5H) to form the DSIF complex. Related pseudogenes have been identified on chromosomes 2 and 12. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Nov 2012]

Retrocopy(s) from SUPT4H1

Retroname Coord Strand Genomic Region ENSG
SUPT4H1P2 chr12:8511305-8512789 - Intergenic
ENSG00000246115 UCSC
SUPT4H1P1 chr2:75650308-75651631 - Intragenic
ENSG00000226247 UCSC

Expression

Transcript Sequences

>NM_003168.3
ATTTACTTCCTGCGGGTGCACAGGCTGTGGTCGTCTATCTCCCTGTTGTTCTTCCCATCGGCGAAGATGGCCCTGGAGACGGTGCCGAAGGACCTGCGGCATCTGCGGGCCTGTTTGCTGTGTTCGCTGGTCAAGACTATAGACCAGTTTGAATATGATGGTTGTGACAATTGTGATGCATATCTACAAATGAAGGGTAACCGAGAGATGGTATATGACTGCACTAGCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTTAAGCCAGGTGTATATGCGGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGCCTACAAATCCAGAGACACAGCTATAAAGACCTAGCAAGATGCAAGGCTGCCAGCATCTTTGCTCTCCACCTCCTGCCTCTGCTTATTTCTTGTTCTGGAACTAAATGAACAGAACTTCAAATACTTCCTACCCTCCAATTCAGACTCAGCTGACTGTTGAGAGAGCAGCACATCATTTTATCATTTTATCTTCTTTGGACTACAGGTGGGGTGGGAGGGATTTGGGTTGGTGGATTAACAGATGGAATTGAGGAGAGAGTAGGATGCTGATTTTCCTACCCGTGGCCCAGGTCTGTGCCTTCCCCATGCCAAGGACTCTAGGTCAAATGTCAATAAATATGAACCTCGAGAAAGTTCTGAAGGCCATGACACCTGCCTTGCCTCCCTCTTCCATTCTCTTAGGCACAGTAATAGCTTATTTGCCCTATAAGAACCTTCCCAGAGCAGCAGAGGCCCTTCTACTCCCTCTTGACTGTCTCAGCCTCTGGGATTGCAGCCTTTGTAGTGTGCTTCCTTGCTTCCTATCGGAGGGTGCTGATCCAGAGGCTCAGTAACCCCATCAACTTGGTGGCCCTGGTGTCTCACACTTGTATCCTTCTGCCCTCGAGACCTGGCACAGCAGTATCCCTTGAAGAAATCCTGAGGCTTTGTAGAGTGCTCCTTGACCATGTTTAATAATTCTTCCCTCCCCTGCTTGTCTATTTTCTTCTCTTCACGGCTCTTCCTATACCTTAGGCCAGTCTCAAGCACTCACTGGAGACCCTTGGGCCTTGGGCGACCATTGAGTCCTAGTCTCCCTTGTTTGTGCCCCTGTAGGAGGTAGGTCCTTTTCTCCTCCGGCCTAGTAGGGGACCTTGGGTAACATCCCATTTTTCGGCCAAGGTGAGTTGTTTTAGGATAAAAAAATTTACCACAAATTCTCATTTAAATTTCCACAGAAATCCTGTTCGTATCCCCATTttgatttccctaagttccttgttctccctctaaaaagagaatgattgcaccctgcctgtttacctcaggattgttgtgattgtagaaacgaagctatgtgaaaattatataagtattataaagGTGAAATACTTTTGCTCTC