Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name CHAF1B
Plot displaying the genomic locations of a parental gene (in chr21) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name chromatin assembly factor 1 subunit B
Also known as CAF-1|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7|MPP7
Coordinate chr21:36380145-36419015
Strand +
Gene summary Chromatin assembly factor I (CAF-I) is required for the assembly of histone octamers onto newly-replicated DNA. CAF-I is composed of three protein subunits, p50, p60, and p150. The protein encoded by this gene corresponds to the p60 subunit and is required for chromatin assembly after replication. The encoded protein is differentially phosphorylated in a cell cycle-dependent manner. In addition, it is normally found in the nucleus except during mitosis, when it is released into the cytoplasm. This protein is a member of the WD-repeat HIR1 family and may also be involved in DNA repair. [provided by RefSeq, Jul 2008]

Retrocopy(s) from CHAF1B

Retroname Coord Strand Genomic Region ENSG
CHAF1BP1 chr6:105666280-105668460 + Intergenic
ENSG00000219088 UCSC

Expression

Transcript Sequences

>NM_005441.3
gggaagcggcgcgcgctgcgcggGAGGTGACGGTGCCTCTGACTGTCCGGGTCCCTCCAGCATTTTGCAGCTTTCTCCTGTCTTGAAGAAGTAGAACGGTGCCCGAGAAACGTTTTTCCCCTTCGAGACTCAGGAGGATGAAAGTCATCACTTGTGAAATAGCCTGGCACAACAAGGAGCCCGTGTACAGCCTGGACTTCCAGCATGGGACGGCTGGGAGGATCCACAGACTGGCGTCTGCCGGCGTGGACACCAATGTCAGGATCTGGAAGGTAGAAAAGGGACCAGATGGAAAAGCCATCGTGGAATTTTTGTCCAATCTTGCTCGTCATACCAAAGCCGTCAATGTTGTGCGTTTTTCTCCAACTGGGGAAATTTTAGCATCGGGAGGAGATGATGCTGTCATCCTATTGTGGAAGGTGAATGATAACAAGGAGCCGGAGCAGATCGCTTTTCAGGATGAGGACGAGGCCCAGCTGAACAAGGAGAACTGGACGGTTGTGAAGACTCTGCGGGGCCACTTAGAAGATGTGTATGATATTTGCTGGGCAACTGATGGGAATTTAATGGCTTCTGCCTCTGTGGATAACACAGCCATCATATGGGATGTCAGCAAAGGACAAAAGATATCAATTTTTAATGAACATAAAAGTTATGTCCAAGGAGTAACCTGGGACCCTTTGGGTCAATATGTTGCTACTCTGAGCTGTGACAGGGTGCTGCGAGTATACAGTATACAGAAGAAGCGTGTGGCTTTCAATGTTTCGAAGATGCTGTCTGGAATAGGGGCTGAAGGAGAGGCAAGAAGCTACCGGATGTTTCACGACGACAGCATGAAGTCTTTCTTCCGTAGACTGAGTTTCACTCCCGACGGATCTTTGCTTCTCACGCCAGCTGGATGTGTGGAATCTGGTGAAAATGTAATGAATACCACTTATGTTTTCTCCAGGAAGAATCTTAAAAGGCCCATCGCTCATCTTCCATGTCCTGGAAAAGCCACTCTTGCTGTTCGCTGCTGTCCGGTCTACTTTGAACTGAGGCCAGTGGTGGAAACAGGTGTGGAGCTGATGAGTCTGCCCTACCGCCTGGTGTTTGCTGTGGCCTCGGAGGATTCCGTGCTTCTGTATGACACCCAGCAGTCCTTCCCTTTTGGTTACGTGTCTAATATACATTACCACACCCTCAGTGACATTTCATGGTCCAGCGATGGTGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCATTTGTGACATTTGAGAAAGATGAACTTGGAATTCCTTTGAAAGAGAAGCCAGTTTTGAACATGAGAACTCCTGATACAGCAAAGAAAACCAAGAGTCAGACACATCGAGGGTCTTCGCCAGGACCCAGACCGGTAGAGGGAACCCCTGCCAGCAGAACCCAAGACCCCAGCAGCCCCGGCACGACTCCCCCTCAGGCCAGACAGGCCCCAGCCCCAACAGTCATCAGGGACCCTCCCTCCATCACTCCTGCTGTCAAAAGCCCCTTGCCGGGGCCTTCGGAGGAGAAGACCCTGCAGCCCAGTAGTCAAAACACAAAAGCCCACCCATCCCGGAGGGTCACTCTGAACACACTGCAAGCCTGGAGCAAGACAACACCCCGGAGAATAAACTTAACACCCTTAAAGACGGACACTCCACCAAGTTCTGTACCAACCAGTGTGATTTCCACCCCTTCTACAGAAGAAATTCAGTCAGAGACGCCTGGAGACGCTCAGGGCAGTCCCCCAGAGCTAAAGCGGCCCAGACTCGATGAAAACAAAGGAGGCACGGAAAGTCTGGACCCTTGATGGGACCTCGGCTTCTGCTCGAAGCCTACCAGGCTCCCGGTGTGTGCAGGGAGACGGTAAAGCTGGAGGTGCCTGAGACCAGGGCTTCCATGGAGCGGGACACACTGTAAATGGATTTCTATAACAGAAGTGACATGTGTACTGATTTTTCTCCAGAAATATGGATGCTGTTGTATTCAGTATCCATTTTTAACTTGGGACATGAACGTTTTAACGTAGTAAATCCTCTTTTTGATGAGTTTCTGAAACTGGAGCGGTTCAACGTTATCCAGTGTGAAAATCAGTGAGTCCTCCCTGGCATCCTCGTGAAAGTGCACACACTTCATGGAGGGACTCCTTTTCAATAAGAATTAGGAAGATGAGAAAGTAATTTGAGATTTTACTCTGTCGAATTTTAGAGTATTTGAAGTGATTGTTAGATTTCACTTCTAAGGAGTTGATTGATTAAACTTTGGAAGGTAGTTGTGTTTGTTTTCTGATTTTAAAGGTGACGATGCTTATTCTTTTAGTAACTAAGTGAAGTGAAAAAGATGGGTATCACCCATCATCTTCCCACCAGAAGTAACCCTCGTTAATGTTGTAGTATATTTCCTTAGCATTTTTGTGGATCTATTTATTCTAAAAAGAGAATTGAGATTTTATTTCATATGCAATTTGGTATCTAAATAGGTTAGTTTTTTAGATTGGTTTTTCAAAGCAAAAAAAGTATCttttttgttttttgagacagggtcttgctctgttgcccaggctggagtgcagtggcgctatctcagctcactgcagcctcgacctcctgggctcgagcgatccttccacctcagcttcccgagtagctgggactacaggcatgtgccaccatgccatgctaatttcacacacacatgcacccacacacacacatatatatgatacatatatatatatatacacacacacacaagtatgtgtgtatatatatattttttttcttttttttttgagatggagtctcactctgtcgcccaggctggagtacagtggcacaatctcggctcactataacctccgcctcctgggttcaaacgattctcctgcctctgcctcttgagtagctaggattacaggtgtgtgccaccacatccggctaatttttatatttttagtagagatggggttttgccatgttggccaagctggtctctaactcctgacctcagatgatctgcctgcctcggcctcccaaagtgttgggattacaggtgtgagctactgcacctggcctaattattatatttttaggggagacggggtttttccatgttgcccaggctggtctcgaactcctggggctcaagtaatcctccctccccagcctcccaaagtgttgggattacaggcgtgagacaccatgcctggtcAAATGGTATCTGTTTTGACGGgtggttctcaactgtagctgcatactgaaatcacctaagagctgacataccagtgcctgggttcccgcttcggaggatttggcctaatcggtctggggtatgttctgaatattaggatttcttaaagctcctggagtaattctgatgcgcagccaagattgagaaATCTAAGGGAAAAAACTTTCCCTGGATACGGTCTGTTCTGGTTAAATGCATTTCCACTGAAAGCAtttttttttttttccgagacagagtctcgctctgtcacccaggctggagtgcagtggcgcaatctccactcactgcaacctcacctcctaggttcaagggattctcctgcctcagcctctccagtagctgggattacaggcacccgccaccacgcccggctaatttttgtatttttagtagagatggtgtttcaccatgttggtcaggctggtctccaacgcctgacctcgtgatctgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccGAAAGCATTTTCTTGATTATCTCTGCCCCGTCACTGATTGACATCCTCCTTTGCTGGGGCCGCGGACTGAAGGACAGTATGCAGGAGGTGCCATCAGCTCTTCTGAAAAGAGACAGCTTTCAGTGTCATGTGGCTGGCGTGAGGTGCGGTTTGCAGTTGTTGATCCTGTGCAGACAGATGAATGACCATGGGTCCCCTGTCCTTATTGAGCAGCCTGCTTCCTGGCCATACCTGGGGAGGAACAGTATTAGGTTTTTctgggtgtggtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggttgggagtttgagaccagcctggccaacatggtggaaccccatctctactaaaaatacaaaaactagccaggcgcggtggcacacacttgtaatcccagctactcgggaggctgaggcacaagaatcgcttgaacccgggaggcggagtttgtagtgagctgagatggtgccactgtactccagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaaaagagaaaaagaagaaCAGTATTAGGTTTTACAAATCTGTTTCTTGTGCATTGATTGTGGGAGTTGGGGTGGGGGACCCCTGATGGCCTGCCTGTTCTCAGCCATCATCCTTAAATATAAATCAAAATTGGCAATAAAAGACCAAGTGAAGTCA