Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ABRAXAS1
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name abraxas 1, BRCA1 A complex subunit
Also known as ABRA1|CCDC98|FAM175A
Coordinate chr4:83459517-83485100
Strand -
Gene summary This gene encodes a protein that binds to the C-terminal repeats of breast cancer 1 (BRCA1) through a phospho-SXXF motif. The encoded protein recruits ubiquitin interaction motif containing 1 protein to BRCA1 protein and is required for DNA damage resistance, DNA repair, and cell cycle checkpoint control. Pseudogenes of this gene are found on chromosomes 3 and 8. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2016]

Retrocopy(s) from ABRAXAS1

Retroname Coord Strand Genomic Region ENSG
ABRAXAS1P1 chr3:100910565-100912105 - Intragenic
ENSG00000213431 UCSC
ABRAXAS1P2 chr8:18086832-18089890 - Intergenic
ENSG00000253384 UCSC

Expression

Transcript Sequences

>NM_139076.3
CTCTTGTGTAGCCTGAGGCGGCGGTAGCATGGAGGGGGAGAGTACGTCGGCGGTGCTCTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGAAGGTTTTCTTCTTGGGGAAGTAAAAGGTGAAGCCAAGAACAGCATTACTGATTCCCAAATGGATGATGTTGAAGTTGTTTATACAATTGACATTCAGAAATATATTCCATGCTATCAGCTTTTTAGCTTTTATAATTCTTCAGGCGAAGTAAATGAGCAAGCACTGAAGAAAATATTATCAAATGTCAAAAAGAATGTGGTAGGTTGGTACAAATTCCGTCGTCATTCAGATCAGATCATGACGTTTAGAGAGAGGCTGCTTCACAAAAACTTGCAGGAGCATTTTTCAAACCAAGACCTTGTTTTTCTGCTATTAACACCAAGTATAATAACAGAAAGCTGCTCTACTCATCGACTGGAACATTCCTTATATAAACCTCAAAAAGGACTTTTTCACAGGGTACCTTTAGTGGTTGCCAATCTGGGCATGTCTGAACAACTGGGTTATAAAACTGTATCAGGTTCCTGTATGTCCACTGGTTTTAGCCGAGCAGTACAAACACACAGCTCTAAATTTTTTGAAGAAGATGGATCCTTAAAGGAGGTACATAAGATAAATGAAATGTATGCTTCATTACAAGAGGAATTAAAGAGTATATGCAAAAAAGTGGAAGACAGTGAACAAGCAGTAGATAAACTAGTAAAGGATGTAAACAGATTAAAACGAGAAATTGAGAAAAGGAGAGGAGCACAGATTCAGGCAGCAAGAGAGAAGAACATCCAAAAAGACCCTCAGGAGAACATTTTTCTTTGTCAGGCATTACGGACCTTTTTTCCAAATTCTGAATTTCTTCATTCATGTGTTATGTCTTTAAAAAATAGACATGTTTCTAAAAGTAGCTGTAACTACAACCACCATCTCGATGTAGTAGACAATCTGACCTTAATGGTAGAACACACTGACATTCCTGAAGCTAGTCCAGCTAGTACACCACAAATCATTAAGCATAAAGCCTTAGACTTAGATGACAGATGGCAATTCAAGAGATCTCGGTTGTTAGATACACAAGACAAACGATCTAAAGCAGATACTGGTAGTAGTAACCAAGATAAAGCATCCAAAATGAGCAGCCCAGAAACAGATGAAGAAATTGAAAAGATGAAGGGTTTTGGTGAATATTCACGGTCTCCTACATTTTGATCCTTTTAACCTTACAAGGAGATTTTTTTATTTGGCTGATGGGTAAAGCCAAACATTTCTATTGTTTTTACTATGTTGAGCTACTTGCAGTAAGTTCATTTGTTTTTACTATGTTCACCTGTTTGCAGTAATACACAGATAACTCTTAGTGCATTTACTTCACAAAGTACTTTTTCAAACATCAGATGCTTTTATTTCCAAACCTTTTTTTCACCTTTCACTAAGTTGTTGAGGGGAAGGCTTACACAGACACATTCTTTAGAATTGGAAAAGTGAgaccaggcacagtggctcacacctgtaatcccagcacttagggaagacaagtcaggaggattgattgaagttaggagttagagaccagcctgggcaacgtattgagaccatgtctattaaaaaataAAATGGAAAAGCAAGAATAGCCTTATTTTCAAAATATGGAAAGAAATTTATATGAAAATTTATCTGAGTCATTAAAATTCTCCTTAAGTGATACTTTTTTAGAAGTACATTATGGCTAGAGTTGCCAGATAAAATGCTGGATATCATGCAATAAATTTGCAAAACATCatctaaaatttaaatttgtcctacatttgtacttgctaaatctggcagccttaATTATTACACAACTATAACACAACACAAACAGTAATCTCTCCCCTAGTTTAGAGTCCTTTGCATGAAATTTAGCAAATCTATCATTTTGAATACAGTACAAGCCTGGTAATCCAGTGTATTTGGGATAGGCCAGTGGAACTCAGAACTGATACATATATACATGTATGTCTATCATATTCAATGTCTATTAGGTGTAAATCATCTCTTCATGTAAAAGACACTACTGGTTTGAGGGTAGACTCGTCTAGGAATATTTTGTCCTTCTGTGACAGCACCACTATCCATCCCAATGTAACATTTCTACAAAGGGAAGATATCTTAACCAGGCATACTTATATTTGCTAGTTGGAAAATCATTCTGAACAGTTTTAATTCCATTCTATTGAATGGATTATTGTATGAGCTATTTGGGGATCAGATATAAATGACAATCACACAGAACCACTTTTATTCAACATAGATAAAATGTGATGAGTGTTAACATTTTAAATAAGCAATCTGCTTAATGGACATTGGTATGAAGGGGAAGTGTCATTCTTTACCTCACTCCTCAAACACTTTTCTATCCAAAGGTTGGTTTGAGTCAGTATTGGCATCATACAACCACTTACTGTAAAATAAGTTTATTAGTGGTAACGTGATAGAATTTATTCCCGATATCTGATGTTACAAACTTTAGGGTCCTTGAGATATGCAGGATCCTTGTATGTAACTGGCATAAACCCTGTAAAGAGATAATTAAAGTTCTTGACAAAACATAATGAGCAAAATTTCAGCTAGCTCAATTCAGTTGTTGAGGTATTCTTTCTTACCCATTATTTGAGCTCTCTTAATTGCTTTTGTGATTTCTTTCTGTTTCTTCCCACAAAGACCTGTAAAATAAAAAGCTTTCTTATTCATAAAAAATGTCAATATTTAAAGTTTGCAAtttttttttttgagatggagtctccctgtgtcacccaggctggagtacagtggtgctctctcgcctcactgcaacctccgccacccaggctcaatcgattatcttgcctcagcctccttagtaactggaattacaggcatgcaccgccacacccggataatttttttgtatttgtagtagaaacggggtttcaccatattggccaggctggtcctgaactcctggcctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaacatgcccagccTCAACAAGTTTTTAAGTcaaggattggtaaatcatttttgtcaagggccacaataataatctaggttttgtgggccatacagtctccatcactgccactcaactctgctgttgtagctcgaaaacaaccatatggcactacgtaaacaaaactacaaaaacaagtggggttgggtgcagtggctcacacctgtaatcccagcactttgggaggcctaggcaggtggatcacctgaggtcaggaattcaagaccagcctggccaacatggagaaacccaatctctaaaaatacaaaaattagccaggcgtggtggtgcatgcctgtaatcccagctattcgggaggctgaagcatgagaatcacttgaacccaggaggcagaggttgcagtgagccgagattgtgccacagcactccagcctgggtgacagtgagattccatctcaaaaaaaaaaaaaagtggcatttgtatatgatgaacctaatcaagataaaaagggagcaggtcgaatttggcctatgggccatagtttgctgacaccAAGTTTAAGTATCAATCTAGGAATGATTATAGTATATTCCAAAACATCAACAACAGTTTTTTAAAGCCCAGTTTTTCTATATAGTTAACTCTGCATAAGACAGCAAAATAATAATCCTCTTGGCCTAAGAGACTTTTTCATAGTAACTAGCTCTAGTCCCTGTAGTATCTGATCTAGTAGTAATTTATAGCACAATTTGAAAATTTGAGTTTTCTTAAATGATAGAAATAGATTGATATAATTCGTATCTACATTTATATTCCCATAATAAAAAAGAACATACCTGTAATGTGCCTTCCATAAATGCATCCAGTAAATGGAGAAACAAACTGGGACAAAAGCTGTTTTGGAGTTTTATGTGGAGGGGAAAAAAAAGTATCTGTTATTTATTTCTGAATGTGTAAATTTCAAAAAACAACCTTCAGGTTATATAAAGCTTTACTAAATTTCAGACACATTTCATAAAATATAAGAAAAAAATATTGTTATCCTCCTGTTACCTTTTAAATATTTTCTATCCAGTGTGTCAAGTCTATATATAATTAAACAGCAGATTAATCAGCA