Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SMARCA5
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
Also known as ISWI|SNF2H|WCRF135|hISWI|hSNF2H
Coordinate chr4:143513702-143557486
Strand +
Gene summary The protein encoded by this gene is a member of the SWI/SNF family of proteins. Members of this family have helicase and ATPase activities and are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The protein encoded by this gene is a component of the chromatin remodeling and spacing factor RSF, a facilitator of the transcription of class II genes by RNA polymerase II. The encoded protein is similar in sequence to the Drosophila ISWI chromatin remodeling protein. [provided by RefSeq, Jul 2008]

Retrocopy(s) from SMARCA5

Retroname Coord Strand Genomic Region ENSG
SMARCA5P2 chr7:102799052-102799551 + Intragenic
N/A UCSC
SMARCA5P1 chr7:77071837-77072336 - Intergenic
ENSG00000225726 UCSC

Expression

Transcript Sequences

>NM_003601.4
GCCGGTGGAACCTAGAGCCCCGCGGAAGAGCAGAACGTTTGGGAGTGTGCAGCTCCTGGGCCCGGCTCAGGCCCGTCGCGGAGGCGCGGCGCAGGGGAGCGCTCGGGTGGGAGTCTCGCTCCTCCACCAGTTTATTGCGACGTAGCATCCAGGCCTAGGCCTCCCCGTCCATCCCCGCCGGACTCGGGCCTCTGGCAGCAGCGGGTGACGCAGACGGAACATCATGTCGTCCGCGGCCGAGCCTCCGCCACCCCCGCCTCCCGAGAGCGCGCCTTCCAAGCCCGCAGCCTCGATCGCCAGCGGCGGGAGCAACAGCAGCAACAAAGGCGGCCCCGAAGGCGTCGCGGCGCAGGCGGTTGCGTCTGCGGCCAGCGCTGGTCCCGCAGACGCCGAGATGGAGGAAATATTTGATGATGCGTCACCTGGAAAGCAAAAGGAAATCCAAGAACCAGATCCTACCTATGAAGAAAAAATGCAAACTGACCGGGCAAATAGATTCGAGTATTTATTAAAGCAGACAGAACTTTTTGCACATTTCATTCAACCTGCTGCTCAGAAGACTCCAACTTCACCTTTGAAGATGAAACCAGGGCGCCCACGAATAAAAAAAGATGAGAAGCAGAACTTACTATCCGTTGGCGATTACCGACACCGTAGAACAGAGCAAGAGGAGGATGAAGAGCTATTAACAGAAAGCTCCAAAGCAACCAATGTTTGCACTCGATTTGAAGACTCTCCATCGTATGTAAAATGGGGTAAACTGAGAGATTATCAGGTCCGAGGATTAAACTGGCTCATTTCTTTGTATGAGAATGGCATCAATGGTATCCTTGCAGATGAAATGGGCCTAGGAAAGACTCTTCAAACAATTTCTCTTCTTGGGTACATGAAACATTATAGAAACATTCCTGGGCCTCATATGGTTTTGGTTCCTAAGTCTACATTACACAACTGGATGAGTGAATTCAAGAGATGGGTACCAACACTTAGATCTGTTTGTTTGATAGGAGATAAAGAACAAAGAGCTGCTTTTGTCAGAGACGTTTTATTACCGGGAGAATGGGATGTATGTGTAACATCTTATGAAATGCTTATTAAAGAGAAGTCTGTGTTCAAAAAATTTAATTGGAGATACTTAGTAATAGATGAAGCTCACAGGATCAAAAATGAAAAATCTAAGTTGTCAGAAATAGTGAGGGAATTCAAGACTACAAATAGACTATTATTAACTGGAACACCTCTTCAGAACAACTTGCATGAGCTGTGGTCACTTCTTAACTTTCTGTTGCCAGATGTGTTTAATTCAGCAGATGACTTTGATTCCTGGTTTGATACAAACAACTGCCTTGGGGATCAAAAACTAGTTGAGAGGCTTCATATGGTTTTGCGTCCATTCCTCCTTCGTCGAATTAAGGCTGATGTTGAAAAGAGTTTGCCTCCAAAGAAGGAAGTAAAAATCTATGTGGGCCTCAGCAAAATGCAAAGGGAATGGTATACTCGGATATTAATGAAGGATATAGATATACTCAACTCAGCAGGCAAGATGGACAAAATGAGGTTATTGAACATCCTAATGCAGTTGAGAAAATGTTGTAATCATCCATATCTCTTTGATGGAGCAGAACCTGGTCCACCTTATACAACAGATATGCATCTAGTAACCAACAGTGGCAAAATGGTGGTTTTAGACAAGCTGCTCCCTAAGTTAAAAGAACAAGGTTCACGAGTACTAATCTTCAGTCAAATGACAAGGGTATTGGACATTTTGGAAGATTATTGCATGTGGAGAAATTATGAGTACTGCAGGTTGGATGGTCAGACACCCCATGATGAGAGACAAGACTCCATCAATGCATACAATGAACCAAACAGCACAAAGTTTGTTTTCATGTTAAGCACGCGTGCTGGTGGTCTTGGCATCAATCTTGCGACTGCTGATGTAGTAATTTTGTATGATTCTGATTGGAATCCCCAAGTAGATCTTCAGGCTATGGACCGAGCACATAGAATTGGGCAGACTAAGACAGTCAGAGTGTTCCGCTTTATAACTGATAACACTGTAGAAGAAAGAATAGTAGAACGTGCTGAGATGAAACTCAGACTGGATTCAATAGTCATTCAACAAGGGAGGCTTGTGGATCAGAATCTGAACAAAATTGGGAAAGATGAAATGCTTCAAATGATTAGACATGGAGCAACACATGTGTTTGCTTCAAAGGAAAGTGAGATCACTGATGAAGATATCGATGGTATTTTGGAAAGAGGTGCAAAGAAGACTGCAGAGATGAATGAAAAGCTCTCCAAGATGGGCGAAAGTTCACTTAGAAACTTTACAATGGATACAGAGTCAAGTGTTTATAACTTCGAAGGAGAAGACTATAGAGAAAAACAAAAGATTGCATTCACAGAGTGGATTGAACCACCTAAACGAGAAAGAAAAGCCAACTATGCCGTTGATGCATATTTCAGGGAAGCTCTTCGTGTTAGTGAACCTAAAGCACCCAAGGCTCCTCGACCTCCAAAACAACCCAATGTTCAGGATTTCCAGTTCTTTCCTCCACGTTTATTTGAATTACTGGAAAAAGAAATTCTGTTTTACAGAAAAACTATTGGGTACAAGGTACCTCGAAATCCTGAGCTGCCTAATGCAGCACAGGCACAAAAAGAAGAACAGCTTAAAATTGATGAAGCTGAATCCCTTAATGATGAAGAGTTAGAGGAAAAAGAGAAGCTTCTAACACAGGGATTTACCAATTGGAATAAGAGAGATTTTAACCAGTTTATCAAAGCTAATGAGAAGTGGGGTCGTGATGATATTGAAAATATAGCAAGAGAAGTAGAAGGCAAAACTCCAGAAGAAGTCATTGAATATTCAGCTGTGTTTTGGGAAAGGTGCAACGAGCTCCAGGACATAGAGAAGATTATGGCTCAGATTGAAAGGGGAGAGGCGAGAATTCAAAGAAGAATAAGCATCAAGAAAGCACTTGACACAAAGATTGGACGGTACAAAGCACCTTTTCATCAGCTGAGAATATCATATGGTACTAACAAAGGAAAAAACTATACTGAAGAAGAAGATCGTTTTCTGATTTGTATGCTTCACAAACTTGGATTTGACAAAGAAAATGTTTATGATGAATTGCGACAGTGTATTCGCAACTCTCCTCAGTTCAGATTTGACTGGTTTCTTAAGTCCAGAACTGCAATGGAGCTCCAGAGGAGATGTAATACCTTAATTACTTTGATTGAAAGAGAAAACATGGAACTAGAAGAAAAGGAGAAGGCAGAGAAAAAGAAACGAGGACCAAAGCCTTCAACACAGAAACGTAAAATGGATGGCGCACCTGATGGTCGAGGAAGAAAAAAGAAGCTGAAACTATGAATATGTTTTTGTTTCATAATCACTAACTTTAAACCAGTAGTTCTTTAATTTACGGGTCTTCATAAGATGTACTGTACAATGCTCAATTGTTATGTCATTTAAAGACATCAGGTTCATCTGTTTACTGAGCTAGAAACATAGTATGTAGTTTCACTTTTTTAAATGCAACAGCTGTGCTGAAATTTTTTTATCATTAACACTTGAAGTAATAAAATAGGCTTCATTTATTACTAAGTGTTTCATTTGATTTATTTTTCTATTGTAGTTCCATTTGTGAAGATTGTGACTTTTTGTTTATTAGCTATAATTTCTACACTTGTAAGGCTTAAAAACAAGTTAAAAAGAAAATTGCAAATAACATTTGTCCCTTTCAGTCTTCACCTAGTTGTGTAATTATTTTAATTCACTTTGCCTTTGCAGAAATTTGGGTATTTTCTTTGTAGTGCTATTGAGTCTCATCTGGAAAGATTATATAAATTGCATTCTCCTTGCTTATGTGGGTAGAATGGGAAAAGAAGGCAAGACAAAGTATACTTAAATTCTATGCATATTTCTGTTATGCTTTCTGTTTTTTTTAGTTGATTCTGAAATGAATATGCCCTATTCTTTTGAAAGAATGGCCTTTTAGTTGTATAGCCAAAGACATTTAGTATTTTCCGGTTCCTTAAGGTATTACTGTACCATTTTGTAAAAGGAAtattattattattatttttaattattTGGTAAATATTTTGTCATATGACCTTCTGAAGCAGCCACAACTTAGATAATGTCAGAACTAAGGTGATTTTTTTTTTTTAATTTTGAAAGCCCAGCCAAAATGAGGTGTGAATTTGTCATACTGTTACATTGAAATTGGTAACAAAATATATCCCCTCCCATTTGGACTTTTAGGGTAAATGAAAATTTTATTGTATTTTAAAGTAGTTTCTAAGTGTTAGCAAGACTGACTATAATTCCAGTTTCTGTTTTCTATGGACAGACCTGATAAACTGGAGACCCTAAAGCAGGAATACCCAAATTATAGTGTCAGGATTTTAGCTGTACCAGAGGCCTTTATGTGCTACACATAATTTGTATAAAATTTTATATGTGCAGATTGGGTACATAAACAGTTCTCCATTTTTCTAAGGGAATGCAATAAATGTAGCATCGTGAATAAATATAACTTTTATAATCCGTAAAGTGGTCTTTTCTTTCCATTTCTTTAATTGTTTTCTCAATTTTTATTCACTTTTTCCTTTAGGACACATTTCCCTTAATTGGATATCTTTCCCTTAAATTTCTATTAGTAGTTGTTTTCATCTGCCCACATGTAATTGAAGATTTAAAAAAAAAATTTTGATACCTGCAGTATTACTAATACTGCTTAATTTCTTGAAATGTGGAATTGCTGCTGTTAATGTCAAGCAAAACGCAGTATTTATGGCAAATTGTAAAGTAATTTGAATTTAGTGCTACCTCAAAATTAACTTTTTAAATACTATGTTAGATTCTTAACAGTTAAAGGTCTAATACATGCATGAGGAATGGTTACTTATGAAAGGAAAAAGAATTTGTAAGAGTTATCACCTCAGTTTGGAAGAAATTGAAAAAATGTAAGGCTGAAGAAAACTTACGGAGGTCACAAAAGTGATGTTTTCAAGAGGAGGAGAAACTGGGAGGGAGATACACAGTGGAAATGCAAAATGAATCAAGTATAGTGGTAGCCCTGAGAGCTTAGGGACTCAAATGGAAACTGTGTGAAGGGAAACTCACTTGAAAAAAAAGCATGAACCAGCTAGGCCCTGCCACCACTGTGTTTGGCCAAGTTCACAAATCTGTTTTAACCTGTCACTTCCCTGTCACTTCTCTGGCTTTCCTCTCCCGCTAAGCTTTTGTTTCCTGGCAGTAATTAAAATCTTCTGTCAGTGCCAcagctactactgctactggaactgccttaaccactactgctactggaactgcCTTAGCCACCTTGGTATCGTGGTTTGGCAAAGTATTGGCCTCTACCACCATAGGGCCCAGAGCTTCTGCCTCCAAAGTTTCCTCCCTTCATGGGTCCAAAATTTGAAGACTGATTGTTGTCATTGCCAAAATCATTGTAGCTTTTACCACCTCCAAAATTGCTTCAATCATTACCAAATCTATTATAGCAATCCCCACTGCCACCATATCCATCACCACCACCATGGCTGCCACCAAAGCCACCACGATCACAGAACTTGATGACTGTATTTGTGACTAATTGTATAATAGTTTCTGTTCTGTGGAAAGTAAAGCATTCCAACACAGGGTTTCAGTGTAGATTGTTTTGTTTTGTACCCATGCTGTTGATTGCTAAATGTTTTAATAATCTGATCATGATACTGAATAAATGTCTTTTTTTTTTTTTAACAACAAAGCATGAAAGATTGCTTAATTGTACATCTGACAAAGTGCTGGAGGCTATTATAAAGTGTAATTATTACTACTTTTAAgagacagggtcttgctctgtcacccaggctggagtgcagtggtgcaatcacagctcactgcaacctcaaacttcagggctcaagtgatcctcccacctcagcttcccaagtagctaggactacagataccacgcccagctaagtttttttagtttttgtagagatagggccttgctatgttgcccagtccggtctcaaacgccgacttcaggcaatcctcttgcgtcaacctctcaaagtgctgggattacatgtgtaagccTACAttccaaagtgctgggatcatagttgtgagcctacaccacacctggccTACATTTTGTTTTTCATAAAGTTGAGAGAAGCAAATCCTAAGCATAGAGTAcaagttgagcatccctaatcaaaaaatctaaaatcagaaatgctccataatttgaatgctcattagggcatttctgatttttggattagggatgctgaactgataagtataatgcaagtattctaaagtctggaaaatgctaaaaacacttctggttccaggcatttcagataaggattgctccatctgCCCTTTGAGTATTTAATATATGCCGATTGTTTGAACTAATCTGGATTTAattatataaatgattatataaatgatCTTTGGCTTAGTACCTTTCTTAATCTCGATCTTAAAAAGCATTGTAAAACACCCCTGTGGTTTTTCAGAAAAATTCTGAGTAAAAAATAAATTTCATCTTGTTCTATCCCTTTGAATCTAAAAAACAAATCTTTTTGAAAGGATGTGCTACTATATTTCAAACCAGTAGTTTTGGAGTAGAACATTGCTAAAAAAATGGGTACTAAGGAGGGTAATTTAAACAAAGTAGATTAATGACACAAGGTGGATTGATGAACTCATAAATCCAAATGAATGGAATGCTAGAAGACATGTATTAACGGAGTAGCTGTTACCAAAATATATACATATTTTGTATATGTACATAGCTGTTACCAAAATGTATCTTTGCCTGTTGGAATCTGATGTCAAGATCAAAGGTGAGGGCATCCCTCAGATGACAGATAATGGGCAAAATACATTCTTGGTGTGGAGCAGTGCTGCAGAATTAACTTCGCTGTGTACATCCCAGAATCGTTTTGGATCTGTTAAGGTTTTTATTAGAATGATTAAATAGGCTTTTGCAGCATTAACTTTACAGTAGTTACCAGAAAAGACTATGCTACAAGAACCAAAATTGAAGTAAGAAGAAAAAGACTGAAATGATATGATTCTAAATGAAAAAAATGAAGAAGTGGAATAGTTTCTCCACAGGCATAAGAGGCAAAGCATTGTTTCAGAAGTGGACTGGCACCTCACCTGAGATACTCAAGACTGGCAACATGGGTCTACATTCTTTGTTACCACAGATTCCCTTGTGTCCGGAGAGATTCCCTAGCTCTAATGACAGCTTTTTTGGGGGGTAATGAGGCTATGAGAAGATTGAGGATCTAGGTACTTGCCTTTAACTCTACAGCATACAAGGTGTGTGGCTCTTATCTCTAGGACACCAATATTTAATGTTGCATATCATGTATCTCCAGTACAAGAAGAAAGTTTATCAGAATTTAGTTAATGTTGGAAACTTTGTAATATAAACAATGTAAACACTACATTGACAAAAATATTTTATTAATACAAAGAATATGCATATAGTTTGCTTACTACAGAAATTCTTGTTTTTGATGTAGACAACCCAAAGGAGTTTTTATGTATATAGATTGTGAATAAATTGGGAAAAGAAATAGAGATAAGTAGAGATTATTTCACTTCATTAAACTTTTGAAGTCCTAA