Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name DDX3Y
Plot displaying the genomic locations of a parental gene (in chrY) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name DEAD-box helicase 3 Y-linked
Also known as DBY
Coordinate chrY:12903999-12920478
Strand +
Gene summary The protein encoded by this gene is a member of the DEAD-box RNA helicase family, characterized by nine conserved motifs, included the conserved Asp-Glu-Ala-Asp (DEAD) motif. These motifs are thought to be involved in ATP binding, hydrolysis, RNA binding, and in the formation of intramolecular interactions. This protein shares high similarity to DDX3X, on the X chromosome, but a deletion of this gene is not complemented by DDX3X. Mutations in this gene result in male infertility, a reduction in germ cell numbers, and can result in Sertoli-cell only sydrome. Pseudogenes sharing similarity to both this gene and the DDX3X paralog are found on chromosome 4 and the X chromosome. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Oct 2014]

Retrocopy(s) from DDX3Y

Retroname Coord Strand Genomic Region ENSG
DDX3P1 chrX:74130566-74131921 + Intergenic
ENSG00000232928 UCSC

Expression

Transcript Sequences

>NM_004660.5
AGTGTAAGAGTTCCGCTATTCGGTCTCACACCTACAGTGGACTACCCGATTTTTCGCTTCTCTTCAGGGATGAGTCATGTGGTGGTGAAAAATGACCCTGAACTGGACCAGCAGCTTGCTAATCTGGACCTGAACTCTGAAAAACAGAGTGGAGGAGCAAGTACAGCGAGCAAAGGGCGCTATATACCTCCTCACTTAAGGAACAGAGAAGCATCTAAAGGATTCCATGATAAAGACAGTTCAGGTTGGAGTTGCAGCAAAGATAAGGATGCATATAGCAGTTTTGGGTCTCGAGATTCTAGAGGAAAGCCTGGTTATTTCAGTGAACGTGGAAGTGGATCAAGGGGAAGATTTGATGATCGTGGACGGAGTGACTATGATGGTATTGGCAATCGTGAAAGACCTGGCTTTGGCAGATTTGAACGGAGTGGACATAGTCGTTGGTGTGACAAGTCAGTTGAAGATGATTGGTCAAAACCACTTCCACCAAGTGAACGCTTGGAGCAAGAACTGTTTTCTGGAGGAAACACGGGGATTAACTTTGAGAAATATGATGATATACCAGTAGAGGCAACCGGCAGTAACTGTCCTCCACATATTGAGAATTTTAGCGATATTGACATGGGAGAAATTATCATGGGGAACATTGAACTTACTCGCTATACTCGTCCTACTCCAGTGCAAAAACATGCCATTCCTATTATTAAGGGAAAAAGAGACTTAATGGCTTGTGCCCAAACAGGATCTGGGAAAACTGCAGCATTTCTTTTACCCATACTGAGTCAGATATATACAGATGGTCCAGGAGAAGCTTTGAAGGCTGTGAAGGAAAATGGAAGGTATGGGCGCCGCAAACAATATCCAATATCCTTGGTTTTAGCCCCAACAAGAGAATTGGCTGTACAGATCTATGAGGAAGCCAGAAAATTTTCCTACCGATCTAGAGTTCGTCCTTGTGTAGTTTATGGTGGTGCTGATATTGGTCAGCAGATTCGGGACTTAGAACGTGGATGCCACTTGTTAGTAGCCACTCCAGGACGTCTAGTGGATATGATGGAAAGAGGAAAGATTGGATTAGACTTCTGCAAGTACTTAGTGTTGGATGAAGCTGATAGGATGCTGGATATGGGATTTGAACCTCAGATACGTCGTATAGTTGAACAAGATACTATGCCACCAAAGGGCGTTCGTCACACCATGATGTTTAGTGCTACTTTTCCTAAGGAAATACAGATGCTTGCTCGTGACTTTTTGGATGAATATATCTTTTTGGCTGTAGGCAGAGTAGGCTCTACCTCTGAGAACATCACACAGAAAGTAGTTTGGGTGGAAGACTTAGATAAACGGTCATTTCTACTGGACATTTTAGGTGCAACAGGGAGTGATTCACTTACTTTAGTGTTTGTGGAGACCAAAAAGGGAGCAGATTCCCTGGAGGATTTCTTATACCATGAAGGATATGCTTGTACTAGTATTCATGGAGACCGGTCACAGAGAGATCGAGAGGAGGCCCTTCACCAGTTTCGCTCAGGAAAAAGCCCAATTCTAGTGGCTACAGCTGTGGCAGCACGAGGACTAGACATTTCAAATGTGAGACATGTTATCAATTTTGATTTGCCAAGTGATATTGAAGAATATGTGCATCGTATTGGCCGTACAGGACGTGTAGGAAACCTGGGCCTTGCCACCTCATTCTTTAATGAAAAAAATATGAATATTACAAAGGATTTGTTGGATCTTCTTGTAGAAGCTAAACAAGAAGTGCCTTCTTGGTTGGAAAATATGGCTTATGAACACCACTACAAGGGTGGCAGTCGTGGACGATCTAAAAGTAATAGATTCAGTGGAGGATTTGGTGCCAGAGACTATCGACAAAGTAGTGGTTCCAGCAGTTCTGGCTTTGGTGCTAGTCGCGGAAGCAGCAGCCGCAGTGGTGGAGGTGGTTACGGCAACAGCAGAGGATTTGGTGGAGGTGGCTATGGAGGCTTCTACAATAGTGATGGATATGGAGGAAATTATAACTCCCAGGGGGTTGACTGGTGGGGCAACTGAATCTGCTTTGCAGCAAAGTCACCCTTACAAAGAAGCTAATATGGAAACCACATGTAACTTAGCCAGACTATATTGTGTAGCTTCAAGAACTTGCAGTACATTACCAGCTGTGATTCTCCTGATAATTCAAGGGAGCTCAAAGTCACAAGAAGAAAAATGAAAGGAAAAAACAGCAGCCCTATTCAGAAATTGGTTTGAAGATGTAATTGCTCTAGTTTGGATTAAACTCTTCCCCTCCTGCTTTAGTGCCACCCCAAACTGCATTTATAATTTTGTGACTGAGGATCGTTTGTTTGTTAACGTACTGTGACTTTAACTTTAGACAACTTACTACTTTGATGTCCTGTTGGCTCAGTAATGCTCACGATACCAATTGTTTTGACAAAATAAATTTACTAAACTTGGCCTAAAATCAAACCTTGGCACAGAGGTATGATACAACTTTAACAGGAGTCATCAATTCATCCATAAATATAAAAAGGGAAAAAAACTTAAGGCAGTAGTCTGCATTAGGACTGTTTGAGTTTTGCAGACTTGGGGTTGGGAGAACATCTTAAAGCATTAAAGCATAGTTTTTTGTATGGCCAACCTTACTAAATTAAGTTCTGACTTGCTCACTCTATCCTGGATAGGCACTTGGGAACTTACACTCTTTAAGCCATTCCAGTCATGATGAGGTGGAATGTATCAGTATACCAATTAATATTTTTGAAAGAGCTCTTTTAGGTTAATTTAAGTACAGCAATTTCTCATGTAATGTTTAGGGAGTTTATTCTAACCTAGGCAAACGGCATGCTATCACAAGAAAGGTTTAAAGCTTTGATAAAATGGGGGAGATTTAATCAGTTTTTTTAATGCCTGCTATAAAAATTTGAAATATTAGAATGGCCGACCATGGCAGTGACCAGGCCTCACTACAGGCCTGGTTGGATTCTGGTCTTTAATGCATGCTAGTGTTGATGTTTTTTGGTCAAGAACGGTTTAAACAGGAAGGATTGTGCAGCAGGCTTTAATTTAATGTAGATTCATACTGCTCTGTTAAAGCTGCATTGAAATGTTAAAATGGCTTACACTTGCAGACTTTGCAAATCTTAAGACTAACAAATCCTTGAAATCACACAGCTTGCAAATACGTACTAAACTGCACAAGGTGTGTGTTCTATATGTGCAGTTTTAGCGTATTTTAGTTGCATAGGTTTCCATGGTATTTATAGTCTCTTGTGCTAAATTTGGCCAAAGATGATTGTCCACCACTAAAAATGCCTCTCCCACTTGGAATTCTGTACTGATTTTGTGGCCAGATGCAATGATCTTTAAAAACAAATCTTTTCAATGGCATAAGAAGTTGACAAAAATTTCTTAAAGTGCAATAGATTTTCAAGTGTATTGTGCCTTGTTCTAAAACTTTTAAGTAGGTGCACTTGACAGTATTGAGGTCATTTGTTAAGGTGCTATTTCAATTAGTGTAGGTTTAGACTCTTGTACATTTCTCCCATAACTTTTTACAAAGTATTTTGTTGCACATTCAGAGAATTTTATATATATATGTCTTGTGTGGGTGTCCTCGACCTTCCAATCTTATTTCGTCTCTTGGAGATTGTTGAATGCAGCCAGTGAAGAAGTAGATTCCTAAATTTTATTGGGGACCATGGAATGGTAGTTGAGAAGAAAACTATTTGCACACAACAGATTTTAGATACTTTTTGCTGCTAGTTGTGTAATATTTATTGAACATTTTGACAAATATTTATTTTTGTAAGCCTAAAAATGATTCTTTGAAAGTTTAAAGAAACTTGACCAAAAGACAGTACAAAAAACACTGGCACTTGAATGTTGAATGTCACCGTATGTGAAATAATATATTTTGGGGTAGTGTGAGCTTTTAATGTTAAGTCTGTTAAACTTGAGTCAAATTAAGCAGACCCGGCATTGGCAATGTAGCTGTAATTTTCTGACAAAATTTAAGACAAAATTGTCAACTTGAAACTAAAACATGCCAAGGTTTTGATATACTTGTCTTAAGATATTAATGAAACACTTCTGAACACTGATAGGAAGTGTCCACATCCACAAAGTTTCTCTTGAgttttgttatgtgttttgttgtgtttgattttCAGTGATTGTCTGGTATATTTACAGTCCTCAAACATGGTTATTTCTGTCAGTGACTTAACATTCGGTTTTATCAGCCAGCAGTATTCTTCAGTAAATAAAGAATGGAATTGCTGAATGTAATCATTGAACCTCGAGTCACTGTAAAAGTTCAGTAATTGCTTATTGTATTAGTTTTAGATGCTGGCACTGCATGTGCTCTGTTTATTCTGATTTTACTAAAATAAAAAGTTCAAAAGTC