Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ZPR1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ZPR1 zinc finger
Also known as GKAF|ZNF259
Coordinate chr11:116773799-116788023
Strand -
Gene summary The protein encoded by this gene is found in the cytoplasm of quiescent cells but translocates to the nucleolus in proliferating cells. The encoded protein interacts with survival motor neuron protein (SMN1) to enhance pre-mRNA splicing and to induce neuronal differentiation and axonal growth. Defects in this gene or the SMN1 gene can cause spinal muscular atrophy. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015]

Retrocopy(s) from ZPR1

Retroname Coord Strand Genomic Region ENSG
ZPR1P1 chr6:108785326-108787053 - Intergenic
ENSG00000219565 UCSC

Expression

Transcript Sequences

>NM_003904.5
AGGAAGCCGAGGTCTGAATTGCGCGTGGTGGCCATGGCGGCCAGCGGGGCTGTGGAACCAGGGCCCCCGGGGGCTGCCGTCGCCCCGTCGCCCGCCCCGGCCCCGCCGCCTGCCCCTGATCACCTGTTCCGGCCCATCAGCGCCGAGGACGAGGAGCAGCAGCCCACCGAGATCGAGTCGCTATGCATGAACTGTTACTGCAATGGCATGACGCGCCTCCTGCTCACCAAGATTCCCTTCTTCAGAGAAATAATAGTGAGCTCCTTTTCCTGCGAGCACTGTGGCTGGAACAACACGGAGATCCAGTCGGCAGGCAGGATCCAGGACCAGGGAGTGCGCTACACTTTGTCTGTCAGGGCTCTGGAGGACATGAACAGAGAAGTGGTGAAGACTGACTCTGCTGCCACAAGGATTCCTGAGCTAGATTTTGAAATTCCTGCCTTTAGCCAGAAAGGAGctctgaccactGTTGAAGGATTGATCACCCGTGCTATCTCTGGCCTGGAGCAGGACCAGCCTGCACGAAGGGCAAACAAAGATGCTACAGCTGAAAGAATTGATGAGTTCATTGTCAAACTGAAGGAGCTAAAGCAAGTAGCCTCCCCTTTCACTCTGATCATTGATGATCCCTCAGGGAACAGTTTTGTGGAAAACCCACATGCTCCTCAGAAAGATGATGCCCTGGTGATCACACACTACAACCGGACCCGACAGCAGGAAGAGATGCTGGGGCTTCAAGAAGAAGCACCAGCAGAGAAGCCAGAAGAGGAAGATCTCAGAAATGAAGTGCTCCAGTTCAGCACAAACTGCCCAGAATGCAATGCCCCCGCTCAGACCAACATGAAGCTAGTACAAATCCCTCACTTTAAGGAGGTTATCATCATGGCTACCAACTGCGAGAACTGTGGGCATCGGACCAATGAGGTGAAATCTGGAGGAGCAGTAGAACCCTTGGGCACCAGGATCACCCTCCACATCACAGATGCCTCAGATATGACCAGAGACCTCCTCAAGTCTGAGACTTGCAGTGTGGAAATCCCAGAGCTAGAATTTGAACTGGGAATGGCAGTCCTCGGGGGCAAGTTCACCACACTGGAAGGGCTGCTGAAAGACATCCGGGAACTGGTGACCAAAAATCCTTTCACACTGGGCGACAGTTCCAATCCTGGACAGACGGAGAGACTACAGGAGTTTAGCCAGAAGATGGACCAGATCATCGAAGGTAACATGAAGGCCCACTTTATTATGGATGATCCAGCAGGAAACAGTTACTTGCAGAATGTGTATGCGCCTGAAGATGATCCTGAGATGAAGGTGGAGCGTTACAAGCGCACCTTTGACCAAAATGAGGAGCTAGGGCTCAATGACATGAAGACAGAGGGCTATGAGGCAGGCCTGGCTCCGCAACGGTAGCAGTGGGTGGCTCAAGGGCCAGCCTCCAGCGCTGCTCTTTCTGTAGGTTATTTATTAGTATTGGATGAAGGCGAAGGCTGGGAGTGTCTTTCCCACCAGCCCTTGCCCATGGTGGGGAGGACATCTGGTCTGAGTCAGAGATCTGTGCACACTTTCTAAACAGCTTGTGATGCAAGTGTGAGCCTATTGTGTTACTTGACCTTATTTTGGAAGTTTTGAATTGGCCTAGGAGGAAACCCAGAAATGAACCAGGGGTATGTCATCACTTTTTTCATATCAAGTCCTCACCCTCCTTCCACATAATGCTCTATCCTCTAAGGTTGGAACTCTGAAGTTGGAGAAGGTGGAATAAAGTTACACCTGGAGTTTGTTGTTGGTTTTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAGTTACCATTGAAATGATGACTTTCAAACAGCACTGGCCTCTGTATTGACCCTATCCTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCTAAAGAAAATTTTCCCGTGTATCTACTGTAATTTGGGGATTGCAGCTGGCATTTAattcattccttcagcagatgcttgcttatctactttatgccaagcacaccacagaacagaggacaaaataaatctctttcatggaacttgaagtctagtggggaaaaatgacaataaacagatcaggaaaacagtacatcagatggtgattagtgtcatggaggaatgtaaagcagggaatggggctgggttgtgcaaggaaatggggagtagggaagatcttctgaacaagaaggtgataatttgacatttgggcaaagctgaggaggaggtcagggagtgagctgtgtgggtatctgggggaagagatttcctggcagagggaactgcaaatgctagagctgtgaggttagagcCAGTGGGGGTACCTGATCAGTTAGCCCTACTCTCAGTTAGAAATGTTGAAACACATTCATCCAGAGAGAAAGGAGGCTCTCTGCAGTTCTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAATAAAGACCAGTTCATTGATTAAGATGTTATCACAAACCTTATTGCTTTGTGTTGCAAACtttttttttttttttttttggtagagacagagtctcgcgctgttgcccaggctggagtgcagtggtgtgatcttggcttattgcaacctttgcctcccgggtttaagcaattctgcctcagcctcccgagtagcggggactacaggcgcacgccgccacacccagctaatttcttttgtattttagtagagacggggtttcaccgtgttgcccaggctggtctcgaactcctgagctcaggcaatccgccagccttggcctcccaaagtgctaggattacaggcgtgagctaccgcgtccggcTGTGTTGCAAACTTAACTCTGAAGAATGAGTTAGAGATGATTTAGCAATCAGACATCTACTCTCGTTGCTCTGTTAAACTACTCTCAAAGGTCACAAGTGATTTTCCACTTGGAAAGTGTTATCTATTTCTGTCACATTTGATAGTGGACCATCTCTTCTTAACCCTTCTTTTGGCTCTCGAGATACTGTACCCTTGGTTTTCCCTTCACTTTGAATATTTCTTATTTGGACACTTTGCCTCCTCCCCTCTTACTAAATTTGTTTCTGAGAGTTCTGCTTTCAGACATCTCTCCATATCAGATTCTTTGGCATCTTACTATCATGTGGGACTAACTTCCATACCTGTATCTCTAATTTCTGTAAGTGAGGGCGAGAGTAAGGTGTTTGGAGACTCAGGTTAGCAAATGACTCATTCAAACTATAAAGCTTCAGTACTTTGGGCAAACTTCTCACAGGCAACTATTCTACCCTAAGAGATTATCTCTAGGTATGTTTCCAGCTGACTTGGgaatctaagtttaccagacaaccctctgatctatcatttggtctcttaagtagacttccccatagtgtaggtgtgctctgttaagataaactgcagtatcaggttcattttccattgtgaaggaaaaaaaatggcactctggcttattactgaatctcttgtgagtttggttggtgtgaggcaatctcccagaatccacccagttcctaggaaatgatgacctgagtttctgaacttgaagactgaggaccaggtgccagactgggataacccagctaaggtacttcctgccctttgaTGACAAGGCATTCTTCAGTTTCATACCCTTCTCTTGAATTATCTTTCAGCTCCTTTCTCATTTCATAAAGTGTGTCAGGATGGGAGCTTACATATAGTTAACTGAGTCTTGCTCCACAGCACCCAGCATATGACACATGGTTAATAAAATCTGTTAAAATCCTCCATCATAGATTAAACCCTATTAGGACACTAGGGATAACATCTATAGGTAAAAAGATAGGGAAAGGGTCTCGCTTTAAGGCCAGGGTAGGTGAGTCAAAGTGCCAGGAACATGTGGATTCAGTTTCACAGCCATGAGTAACATTTAAGTGGAAAAGGTTTGTGATTGTGTTAAAAAAGGAAAGTGGTTCATGCATGAGGGCACGCCTCCTACTTTCATGGGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACATACAGGTAGGTACTGAATGTACATCTGTGTCATGATGAGTGGAGGAGGGGAGGTGAGTGTTGGGAGCAAGTATGAAGGGCAGTTGACTTGGCCAACTGAAAACTTTAATGATGGCAACACTTTCATTCTAACATCAGTATATTTCCTTCTTTGTACACCTGTGGTATGTGCCTGATGCACACTGCAGAAAATGGTGTCTCTGCTTACATTTAGGGCAGTGGTGGCTAAGACTACTTGGCTTTATTCCTATTAAAAAATGTTTTTTACACACTTCTTTTTAAGGCAAATGGCAGTGTTTCCAACTGTGGAGAGAAAAAGCTGCTTATTTTGTGCGTTCACCTCAGTTTAGTATTGGcacttccaatgcttgttttcctagtctgtaaaatggggataattaggataaacaaaattatccccattttacaggtgacaaaacagcctcagagaggttaCTTCCAGAAGGAAGCAGAGCtttttttttttttttttttttttttttttttttttgagacggagtctcactctgttgcccagactggagtgcagtggcgtgatcttggctcaccacaacctctgcctcccaggttcaagcgattctcttgcctcagccttctgagtagctgggactacaggtgcacgccaccatgcctggctaattttttttttttttttttttttggagacagtcttgctctgtcacccaggatggagtgcagtggtgcgatcttggctcactgcagccttgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacagacgcccaccactgcacccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggctggtctcaaacccctgacctcgtgatccacctgccttggcctcccaaagtgcagggattacaggcgtgagccaccgtgcctggccAGAAGTAGAGCTTCTAAGAGGCAGGTGTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAGCTCAGCTCCACAATTACTGTATTTGTTCTATTAGATACAACTGCAGAGAGAGGCCAAAGCTCAGAGCAGGCCATTGGCACGGCATCTGATCCTGCTTAACTGCCCTGCAGCACAGGGTGGAGACACTTGGGCCTTGTCAGGCTAAGGGACTGGGGTAGGATGGGTAGCAGTGGAATTGAAGACAAAGAAAACAAATGGGCAGAAGATGGGTGGGTGGAAGTTCAGAGGGCTATCCTGGCAGTGTTCACTGGAGCAGAAGTGTGAGGCTTTCTGAATGCCTGCTGACACCAGGGTGGGGCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTATGGGGTACCCTGGGGCCCTCCGCCTAGTGAAGCCCTATCTTCTCAGCCCAGCGTCCTCGTCTCACAAGCCCTCAGAGCCCCAGCCTGCTTTCCTTTCTGGGCCTGTGCTGCAACCCCCTCAACATGGCCCACTGGGTAAAAATTCATGCTTCAAGACtgatccccaagcctgttttgtattatatgagtaaagaattttttaaacacttatccccagataatgtgtatttatttataaagtatagccctgtctgcttgactaatatattaAAAAAGTGACCTTTTTGACTCTTGGTCCAAGAAACTATTGTTTGCACTTTTGTGTAGTTGTGTATAGCATCCTGCAAATTCTGTCAGAAGTCTGTGATTTCAGTAACACTAAAACTTCTCTCtcaaatggtacaagttttcagttttaagacaagttctgggaatctaatgtacaacatgttgactatagctaataattctgtattgtttacttgaagtttgctaagacaaatttgcttaagtgcccccccaccgaactactacataaattagtgaaggatgttttacttaatttgattttggtaatcattacacaatgtataattatatccagtcatcacattgtacaccttgaatatatataattttttgtcaaataataaagctgggaagaAAACGATAAAACTGACAATCTAACATATATGATGAGGTAAAAAGATCTGGTATTTCAAGAAATTTGGATGACCTCTTGCACCCCACTTCGctagcctctactccctagagtcatgttctgactatgtgaagttgagcaacttccttaatcttgccacgcttcagttcttatctgtaaaatatgataatgaaacgatttgagaattgtgagggttaaatgagataattcaggtaaagctctaaacCCCCTGCAAAGAATAAAGTCTTTTCTTTCCCCCCAAAA