Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name IFT20
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name intraflagellar transport 20
Also known as -
Coordinate chr17:28328326-28335472
Strand -
Gene summary This gene encodes a intraflagellar transport protein important for intracellular transport. The encoded protein forms part of a complex involved in trafficking of proteins from the Golgi body, including recycling of immune signalling components (Finetti et al., PubMed: 19855387). This gene is part of a complex set of sense-antisense loci that may be co-regulated. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. A pseudogene of this gene is located on the long arm of chromosome 14.[provided by RefSeq, Jun 2012]

Retrocopy(s) from IFT20

Retroname Coord Strand Genomic Region ENSG
IFT20P1 chr14:31018300-31018791 + Intragenic
ENSG00000258968 UCSC
IFT20P2 chr15:89037939-89038365 - Intergenic
ENSG00000260275 UCSC

Expression

Transcript Sequences

>NM_001267774.2
ATAGGTAAACAGGCTCTGTATCCGTGGCAGCGGCCGTGGCAGGCTGGCTGGGTACCGGCTGTCGCTGACCCAGGAGAAGCTGCCTGTCTACATCAGCCTGGGCTGCAGCGCGCTGCCGCCGCGGGGCCGGCAGctgaactatgtgctcttcagggcgggcaccgtgttgcattcatctttgtacccccagcatctagcagtgttggcatgtagtaggcactcaagaaatgtgtgttgaatgaacgaTGCCTGTGACAAGCAAGCGGACTTTATTCTTTCCTGACCCTTGCTCCTATGACACACCTCCTCCTGACTGCCACTGTCACTCCTTCAGAGCAGAACTCCTCTAGGGAACCTGGATGGGAAACAGCCATGGCCAAGGACATCCTGGGTGAAGCAGGGCTACACTTTGATGAACTGAACAAGCTGAGGGTGTTGGACCCAGAGGTTACCCAGCAGACCATAGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGGTTTAATTGAGCTTGTTGATCAACTTGCAAAAGAAGCAGAAAATGAAAAGATGAAGGCCATCGGTGCTCGGAACTTGCTCAAATCTATAGCAAAGCAGAGAGAAGCTCAACAGCAGCAACTTCAAGCCCTAATAGCAGAAAAGAAAATGCAGCTAGAAAGGTATCGGGTTGAATATGAAGCTTTGTGTAAAGTAGAAGCAGAACAAAATGAATTTATTGACCAATTTATTTTTCAGAAATGAACTGAAAATTTCGCTTTTATAGTAGGAAGGCAAAACAAAAAAAAGCCTCTCAAAACCAAAAAAACCTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAAGACAGCACTACAAGTCTGGGGGAGCCAGTTTTAACATCAGTGCACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTGGAACTAAGCAGTTTGTAAACTTTCATCCTTTTTTTTGTAAATTCACAAAGCTTTGGAAGGAGAAGCAATAAATTTTTGTTTTCAAATGG