Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name PDLIM1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name PDZ and LIM domain 1
Also known as CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1
Coordinate chr10:95237569-95291006
Strand -
Gene summary This gene encodes a member of the enigma protein family. The protein contains two protein interacting domains, a PDZ domain at the amino terminal end and one to three LIM domains at the carboxyl terminal. It is a cytoplasmic protein associated with the cytoskeleton. The protein may function as an adapter to bring other LIM-interacting proteins to the cytoskeleton. Pseudogenes associated with this gene are located on chromosomes 3, 14 and 17. [provided by RefSeq, Oct 2012]

Retrocopy(s) from PDLIM1

Retroname Coord Strand Genomic Region ENSG
PDLIM1P1 chr14:50050321-50051686 + Intergenic
ENSG00000270788 UCSC
PDLIM1P4 chr3:98782294-98783542 + Intergenic
ENSG00000249274 UCSC

Expression

Transcript Sequences

>NM_020992.4
CTCCGACAGCCGCCGGGGGTGCCCTGCAAGCTGTTCCGCGCGTCCTGCCCGTCTGTCCCCGCGGGTCGTCGCCCGCCACAGCCGCGCCATGACCACCCAGCAGATAGACCTCCAGGGCCCGGGGCCGTGGGGCTTCCGCCTCGTGGGCGGCAAGGACTTCGAGCAGCCTCTCGCCATTTCCCGGGTCACTCCTGGAAGCAAGGCGGCTCTAGCTAATTTATGTATTGGAGATGTAATCACAGCCATTGATGGGGAAAATACTAGCAATATGACACACTTGGAAGCTCAGAACAGAATCAAAGGCTGCACAGACAACTTGACTCTCACTGTAGCCAGATCTGAACATAAAGTCTGGTCTCCTCTGGTGACGGAGGAAGGGAAGCGTCATCCATACAAGATGAATTTAGCCTCTGAACCCCAGGAGGTCCTGCACATAGGAAGCGCCCACAACCGAAGTGCCATGCCCTTTACCGCCTCGCCTGCCTCCAGCACTACTGCCAGGGTCATCACAAACCAGTACAACAACCCAGCTGGCCTCTACTCTTCTGAAAATATCTCCAACTTCAACAATGCCCTGGAGTCAAAGACTGCTGCCAGCGGGGTGGAGGCGAACAGCAGACCCTTAGACCATGCTCAGCCTCCAAGCAGCCTTGTCATCGACAAAGAATCTGAAGTTTACAAGATGCTTCAGGAGAAACAGGAGTTGAATGAGCCCCCGAAACAGTCCACGTCTTTCTTGGTTTTGCAGGAAATCCTGGAGTCTGAAGAAAAAGGGGATCCCAACAAGCCCTCAGGATTCAGAAGTGTTAAAGCTCCTGTCACTAAAGTGGCTGCGTCGATTGGAAATGCTCAGAAGTTGCCTATGTGTGACAAATGTGGCACTGGGATTGTTGGTGTGTTTGTGAAGCTGCGGGACCGTCACCGCCACCCTGAGTGTTATGTGTGCACTGACTGTGGCACCAACCTGAAACAGAAGGGCCATTTCTTTGTGGAGGATCAAATCTACTGTGAGAAGCATGCCCGGGAGCGAGTCACACCACCTGAGGGTTATGAAGTGGTCACTGTGTTCCCCAAGTGAGCCAGCAGATCTGACCACTGTTCTCCAGCAGGCCTCTGCTGCAGCTTTTTCTCTCAGTGTTCTGGCCCTCTCCTCTCTTGAAAGTTCTCTGCTTACTTTGGTTTTCCCTCTGCTTGTAAAACATTGAGTCCCCTCCCTGCCTTGGTTAATTGACTCACACCAGCTGTGCGATGCCCGCTTTTACAATTAAAGGAAAACTGTTTTGTTCAGTGTCACCTTGTCAGCAACACTGTGTCCCTTCGCCCCACCGTTCTTCTCTGCTGCATTTGGACATCAGCCAAATTTGAACCCAATCAAATATAACGTGTCTGACACTGATTTTGTTTTTACTCAATAAATGTATAGACTACAAA