Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name MRPS36
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein S36
Also known as DC47|MRP-S36
Coordinate chr5:69217760-69230158
Strand +
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. The mitochondrial ribosome (mitoribosome) consists of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein. Pseudogenes corresponding to this gene are found on chromosomes 3p, 4q, 8p, 11q, 12q, and 20p. [provided by RefSeq, Jul 2008]

Retrocopy(s) from MRPS36

Retroname Coord Strand Genomic Region ENSG
MRPS36P4 chr11:112208574-112208961 + Intragenic
 ENSG00000255231 UCSC
MRPS36P5 chr12:43054095-43054348 - Intergenic
 ENSG00000257927 UCSC
MRPS36P1 chr3:6772209-6773370 - Intergenic
 ENSG00000236152 UCSC
MRPS36P2 chr4:186900536-186900960 + Intergenic
 ENSG00000249539 UCSC
MRPS36P3 chr8:122091477-122091676 + Intergenic
 ENSG00000253814 UCSC

Expression

Transcript Sequences

>NM_033281.6
ACAGCTGCCCGGGACTCCAGTGATCGCCGCGGCTCGCTCGCGCCCCGGAAACTGCCCCTTCTCGGGGGTCATGATGGGCAGCAAGATGGCGTCTGCTAGTAGGGTCGTTCAGGTAGTCAAACCACACACTCCATTAATAAGGTTTCCTGACAGAAGAGACAATCCTAAACCCAATGTATCAGAAGCTTTGAGATCAGCAGGGCTACCATCTCACTCTTCTGTAATTTCACAACATTCTAAAGGAAGTAAATCACCAGATTTGCTGATGTATCAGGGTCCACCGGACACTGCAGAAATAATAAAAACATTACCTCAGAAATACAGAAGGAAACTTGTGTCTCAAGAAGAAATGGAATTTATCCAACGTGGAGGTCCTGAATAACCATGGTGGCTGCTGTTTGTCATCAGACAATAGAATTGTCTTTACAATAAAGGACTTCCAAAATGACAGATGAGAAACTGTATATTAAACACCTTTAATAAATATTATGAAAAAAATGAAATATAGAAAATTTAGATGGACACTTGTATTTCCTAATTTATGTATCTTGGTCAGCTTCTCCACAAGCTTACCTAATTGTTTATATACTTTATACTTATTAAAGTATACATTTTTAAATGTTAGCCTATTAATTTACTCTTGATTATCAAACATTACCAGTGTTGAACTATTAAAAGCACACAATGTGTAGTAAACTATCATAGGATTCCCATAATTTCACTTTACTTTCTGTTTAGGCATGGAAAAATTTATCAGTCAGAATTGCTGTTTTAGGGACATGATTTTCCTGAAATTGGGTGAGGATCAGTGAAATAattactctattacttgttcttaattctctgttctctaATGTTTTTTCATTCACAAGTTTACTGGAGTATAACTGGCTTAGTAAGTATATCCTACTCTGAATGATAAAAATATAGTCAAGCTAAAATAGGTGACTATACTATTAAGATAGAGATCATACAAAAGATTCCAAAGAAAGTCAAAAAGTGTAAAATGGAAAATAAGAGATCAAAATGAATATAGCATAGGAATAAAGATTTCACTAGAAATTGCAATTTATTATGTTTTGGAGGTTGTAAGGAAGTCTTGTTTTTTGGTTTATTTTACTGTTTTGTGATCTTGTATGCAAATCCTGATAACCATTAACCTTCTCAAACTTAATGTCTGAGAGCCTCATAAAATCAACATATTTACTTATTAAGCAGTTTATGAAACTTTAATGGGGCCCCTCCTGTGCCAAGGGTACGTATATTGTGAAGTAAAGCCTCACAAAGCTAAATAAATTCTCTTCCATACCTTTAA
>NM_033281.6_2
ACAGCTGCCCGGGACTCCAGTGATCGCCGCGGCTCGCTCGCGCCCCGGAAACTGCCCCTTCTCGGGGGTCATGATGGGCAGCAAGATGGCGTCTGCTAGTAGGGTCGTTCAGGTAGTCAAACCACACACTCCATTAATAAGGTTTCCTGACAGAAGAGACAATCCTAAACCCAATGTATCAGAAGCTTTGAGATCAGCAGGGCTACCATCTCACTCTTCTGTAATTTCACAACATTCTAAAGGAAGTAAATCACCAGATTTGCTGATGTATCAGGGTCCACCAGACACTGCAGAAATAATAAAAACATTACCTCAGAAATACAGAAGGAAACTTGTGTCTCAAGAAGAAATGGAATTTATCCAACGTGGAGGTCCTGAATAACCATGGTGGCTGCTGTTTGTCATCAGACAATAGAATTGTCTTTACAATAAAGGACTTCCAAAATGACAGATGAGAAACTGTATATTAAACACCTTTAATAAATATTATGAAAAAAATGAAATATAGAAAATTTAGATGGACACTTGTATTTCCTAATTTATGTATCTTGGTCAGCTTCTCCACAAGCTTACCTAATTGTTTATATACTTTATACTTATTAAAGTATACATTTTTAAATGTTAGCCTATTAATTTACTCTTGATTATCAAACATTACCAGTGTTGAACTATTAAAAGCACACAATGTGTAGTAAACTATCATAGGATTCCCATAATTTCACTTTACTTTCTGTTTAGGCATGGAAAAATTTATCAGTCAGAATTGCTGTTTTAGGGACATGATTTTCCTGAAATTGGGTGAGGATCAGTGAAATAattactctattacttgttcttaattctctgttctctaATGTTTTTTCATTCACAAGTTTACTGGAGTATAACTGGCTTAGTAAGTATATCCTACTCTGAATGATAAAAATATAGTCAAGCTAAAATAGGTGACTATACTATTAAGATAGAGATCATACAAAAGATTCCAAAGAAAGTCAAAAAGTGTAAAATGGAAAATAAGAGATCAAAATGAATATAGCATAGGAATAAAGATTTCACTAGAAATTGCAATTTATTATGTTTTGGAGGTTGTAAGGAAGTCTTGTTTTTTGGTTTATTTTACTGTTTTGTGATCTTGTATGCAAATCCTGATAACCATTAACCTTCTCAAACTTAATGTCTGAGAGCCTCATAAAATCAACATATTTACTTATTAAGCAGTTTATGAAACTTTAATGGGGCCCCTCCTGTGCCAAGGGTACGTATATTGTGAAGTAAAGCCTCACAAAGCTAAATAAATTCTCTTCCATACCTTTAA