Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name TRIP4
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name thyroid hormone receptor interactor 4
Also known as ASC-1|ASC1|HsT17391|MDCDC|SMABF1|ZC2HC5
Coordinate chr15:64387836-64455303
Strand +
Gene summary This gene encodes a subunit of the tetrameric nuclear activating signal cointegrator 1 (ASC-1) complex, which associates with transcriptional coactivators, nuclear receptors and basal transcription factors to facilitate nuclear receptors-mediated transcription. This protein is localized in the nucleus and contains an E1A-type zinc finger domain, which mediates interaction with transcriptional coactivators and ligand-bound nuclear receptors, such as thyroid hormone receptor and retinoid X receptor alpha, but not glucocorticoid receptor. Mutations in this gene are associated with spinal muscular atrophy with congenital bone fractures-1 (SMABF1). [provided by RefSeq, Apr 2016]

Retrocopy(s) from TRIP4

Retroname Coord Strand Genomic Region ENSG
TRIP4P1 chr6:139660028-139661727 + Intergenic
ENSG00000205695 UCSC

Expression

Transcript Sequences

>NM_001321924.2
GCAGCTCAGCTGGTTCCGGCTGGGGAAGATGGCGGTGGCTGGGGCGGTGTCCGGGGAGCCGCTGGTGCACTGGTGCACCCAGCAGTTGCGGAAGACTTTCGGCCTGGATGTCAGCGAGGAGATCATTCAGTGAGAACAGTTCGGGTCCAAGCGGGGAAGGAGCTCTGGGATGTGCACTGCCTGAGCGAACCGGGAAGCGGGGAGGACTGAAAAGTACGTTTTGTCAATTGAGAGTGCTGAAGAGATACGAGAATATGTTACTGATCTCCTCCAGGGAAATGAAGGCAAAAAAGGTCAATTCATAGAAGAACTTATAACCAAATGGCAAAAGAATGATCAGGAGTTGATTTCGGATCCTTTGCAGCAGTGCTTCAAAAAAGATGAAATTTTAGATGGGCAGAAATCAGGCGACCATCTAAAGCGGGGTAGGAAGAAAGGGAGAAACAGACAGGAAGTTCCTGCATTTACTGAACCTGACACGACTGCAGAGGTTAAAACACCTTTTGATTTGGCCAAGGCACAAGAGAACAGCAACTCCGTAAAGAAGAAGACAAAGTTTGTCAATTTATACACAAGAGAGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCCTGGGCCAGAAGCACAAGCTCATCAATAACTGTCTGATCTGTGGGCGCATTGTCTGTGAACAAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAGATATTTTACAGCGTGACTCAAACAAGAGCCAGAAACTGCTAAAGAAACTCATGTCAGGAGTGGAGAATTCTGGAAAGGTGGACATCTCTACCAAGGACCTTCTTCCTCATCAAGAATTGCGAATTAAGTCTGGTCTGGAGAAGGCTATCAAGCATAAAGACAAACTGTTAGAGTTTGACAGAACTAGTATTCGAAGGACCCAAGTCATTGATGATGAGTCAGATTACTTTGCCAGTGATTCTAACCAATGGTTGTCCAAACTTGAGCGGGAAACCTTGCAGAAGCGAGAGGAGGAGCTGAGAGAACTTCGACACGCCTCTCGACTTTCTAAGAAGGTCACCATTGACTTTGCAGGAAGGAAGATCCTGGAAGAAGAAAATTCACTAGCAGAGTATCATAGCAGACTAGATGAGACAATACAGGCCATTGCCAATGGAACCTTGAACCAGCCACTGACCAAATTGGATAGATCTTCTGAAGAGCCTTTGGGAGTTCTGGTAAATCCCAACATGTACCAGTCCCCTCCCCAGTGGGTTGACCACACAGGTGCAGCCTCACAGAAGAAGGCTTTCCGTTCTTCAGGATTTGGACTAGAGTTCAACTCATTTCAGCACCAGTTGCGAATCCAGGATCAAGAATTTCAGGAAGGCTTTGATGGTGGCTGGTGCCTCTCTGTACATCAGCCCTGGGCTTCTCTGCTTGTCAGAGGGATTAAAAGGGTGGAGGGCAGATCCTGGTACACCCCCCACAGAGGACGACTTTGGATAGCAGCCACAGCTAAAAAACCCTCCCCTCAAGAAGTCTCAGAACTCCAGGCTACATATCGTCTTCTTCGTGGGAAAGATGTGGAATTTCCTAATGACTATCCGTCAGGTTGTCTTCTGGGCTGTGTGGACCTAATTGACTGCTTGTCCCAGAAGCAATTTAAGGAGCAGTTTCCAGACATCAGTCAAGAGTCTGATTCTCCATTTGTTTTCATCTGCAAAAATCCTCAGGAAATGGTTGTGAAGTTTCCTATTAAAGGAAATCCAAAAATCTGGAAATTGGATTCCAAGATCCATCAAGGAGCAAAGAAGGGGTTAATGAAGCAGAATAAAGCTGTCTGACCCAGGAGAAAAGGAACTATACAGCATAGTGGAGTTTTGTGTACTAAAATTGCTATCTACTGGTCCTTTGGAATTGAAGTAGTAGAAACCTAAAGGCTTGGCGTCAGGCTTGAATATCTCAGAACTTAAACTCTTACCAAAATCTGTATATTTTTCTTAAGGAGTGGGATTCCTACTTTATGTAATGGGGTCGAAATCTTTGAACACATTATTTATAAAAACCTGTTTAAAAATTCTAA