Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name DDX23
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name DEAD-box helicase 23
Also known as PRPF28|SNRNP100|U5-100K|U5-100KD|prp28
Coordinate chr12:48829756-48852163
Strand -
Gene summary This gene encodes a member of the DEAD box protein family. DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. The protein encoded by this gene is a component of the U5 snRNP complex; it may facilitate conformational changes in the spliceosome during nuclear pre-mRNA splicing. An alternatively spliced transcript variant has been found for this gene, but its biological validity has not been determined. [provided by RefSeq, Jul 2008]

Retrocopy(s) from DDX23

Retroname Coord Strand Genomic Region ENSG
DDX23P1 chr12:52730369-52733562 + Intergenic
ENSG00000257616 UCSC

Expression

Transcript Sequences

>NM_004818.3
ATCTCCGCGACCAGGAAACGGGAAAGATGGCGACGGCTCCGCGACGTTGAGGCCGCGTTGGGCGGTTCAGACTCAGGGTGATGGCAGGAGAGCTGGCTGACAAAAAGGACCGTGATGCATCACCTTCCAAGGAGGAAAGGAAGCGATCACGGACTCCTGACAGAGAGCGGGATAGAGACCGGGACCGGAAGTCTTCCCCATCTAAAGATAGAAAGCGGCATCGTTCAAGGGATAGACGTCGAGGAGGCAGCCGTTCTCGCTCTCGTTCCCGTTCCAAATCTGCAGAAAGAGAACGACGGCACAAAGAACGAGAACGAGATAAGGAGCGGGATCGGAATAAGAAGGACCGAGATCGAGACAAGGATGGGCACAGACGGGACAAGGACCGTAAACGATCCAGCTTATCTCCTGGTCGAGGAAAAGACTTTAAATCTCGGAAGGACAGAGACTCTAAGAAGGATGAAGAGGATGAACATGGTGATAAGAAGCCTAAGGCCCAGCCATTATCCCTGGAGGAGCTTCTGGCCAAGAAAAAGGCTGAGGAAGAAGCTGAGGCTAAGCCCAAGTTCCTCTCTAAAGCAGAACGAGAGGCTGAAGCTCTAAAGCGACGGCAGCAGGAGGTGGAAGAGCGGCAGAGGATGCTTGAAGAAGAGAGGAAGAAAAGGAAACAGTTCCAAGACTTGGGCAGGAAGATGTTGGAAGATCCTCAGGAACGGGAACGTCGGGAACGCAGGGAGAGGATGGAACGGGAGACCAATGGAAATGAGGATGAGGAAGGGCGGCAGAAGATCCGGGAAGAGAAGGATAAGAGCAAGGAACTGCATGCCATTAAGGAGCGTTACCTGGGTGGCATCAAAAAGCGGCGCCGAACGAGACATCTCAATGACCGGAAATTTGTTTTTGAGTGGGATGCATCTGAGGACACATCCATTGACTACAACCCCCTGTACAAAGAACGGCACCAGGTGCAGTTGTTAGGGCGAGGCTTCATTGCAGGCATTGACCTCAAGCAGCAGAAGCGAGAGCAGTCACGTTTCTATGGAGACCTAATGGAGAAGAGGCGAACCCTGGAAGAAAAGGAGCAGGAGGAGGCAAGACTCCGCAAACTTCGTAAGAAGGAAGCCAAGCAGCGCTGGGATGATCGTCATTGGTCTCAGAAAAAGTTAGATGAGATGACGGACAGGGACTGGCGGATCTTCCGTGAGGACTACAGCATCACCACCAAAGGTGGCAAGATCCCCAATCCCATCCGATCCTGGAAAGACTCTTCTCTGCCCCCACACATCTTGGAGGTCATTGATAAGTGTGGCTACAAGGAACCAACACCTATACAGCGTCAGGCAATTCCCATTGGGCTACAGAATCGTGACATCATTGGTGTGGCTGAGACTGGCAGTGGCAAGACAGCAGCCTTCCTCATCCCTCTGCTGGTCTGGATCACCACACTTCCCAAAATTGACAGGATCGAAGAGTCAGACCAAGGCCCTTATGCCATCATCCTGGCTCCCACCCGTGAGTTGGCTCAACAGATTGAGGAAGAGACCATCAAGTTTGGGAAACCGCTAGGTATCCGCACTGTGGCTGTCATTGGTGGCATCTCCAGAGAAGACCAGGGCTTCAGGCTGCGCATGGGTTGTGAGATTGTGATTGCTACCCCTGGGCGTTTGATTGATGTGCTGGAGAACCGCTACCTGGTGCTGAGCCGCTGTACCTATGTGGTTCTGGATGAGGCAGATAGGATGATTGACATGGGCTTTGAGCCAGATGTCCAGAAGATCCTGGAGCACATGCCTGTCAGCAACCAGAAGCCAGACACGGATGAGGCTGAGGACCCTGAGAAGATGCTGGCCAACTTTGAGTCGGGAAAACATAAGTACCGCCAAACAGTCATGTTCACGGCCACCATGCCCCCAGCGGTGGAGCGTCTGGCCAGGAGCTATCTTCGGCGACCTGCTGTGGTGTACATTGGCTCCGCAGGCAAGCCCCATGAGCGTGTGGAACAGAAGGTCTTCCTCATGTCAGAGTCAGAAAAGAGGAAAAAGCTGCTGGCAATCTTGGAGCAAGGCTTTGACCCACCCATCATTATTTTTGTCAACCAGAAGAAGGGCTGCGACGTGTTGGCCAAATCCCTGGAGAAGATGGGGTACAATGCTTGCACACTGCACGGTGGAAAAGGCCAGGAGCAGCGAGAGTTTGCGTTGTCCAACCTCAAGGCTGGGGCCAAGGATATTTTGGTGGCTACAGATGTGGCTGGTCGTGGTATTGACATCCAAGATGTGTCTATGGTTGTCAACTATGATATGGCCAAAAATATTGAAGATTACATCCACCGCATTGGCCGCACGGGACGAGCAGGCAAGAGTGGGGTGGCCATCACCTTCCTCACAAAAGAGGACTCTGCTGTGTTCTACGAGCTGAAGCAAGCTATCCTGGAAAGCCCAGTGTCTTCCTGTCCCCCCGAACTAGCCAACCACCCAGATGCCCAGCATAAGCCAGGCACCATCCTCACCAAGAAGCGCCGGGAAGAGACCATCTTTGCCTGACACAGCACTCTTCCTGTGGGCTGAGGGCATCTCCAAAGCTGCCTGATGCCTGTTTTTCAGAACCCTCACATCCCTCTTTCCAGGTCCTCACTCTTGGGATATGGGGGCTTAGGAAAACAATCCAACTCCCTAGCCCAGACCCTCAGGTCAGGAGGCCTGCGTGTGGGGCTGCAAAAGGAGAGGACGACGCTGTCGGAGGCAGGGAGAGCAAATTACCACAGCTTCTTGGCCCAGTTCTGCCCTTCTTTGCTTTGGGATTGCACTGGGCCATCAGCTCATGCCAGGCTATGGGGGCAGCCAGTTGGCATTGCTCCCCAGACTGAACAGAAACCTGGCCGCCGGATGGGACCTCCTTTGGCACAGACTTGACTGTGTAACTGCATAAACTGCAGTAGCATCATTGCCCTAGATGCCCCAGGAGACCTGGCACCATGAGGATTACAGACAGTGGAATCTTACTGTCATCTGGACAGCTGTTTTCCTGTTTGGATGGTAAAGGAAGTTGAGAGTCTTTAGACCTGTGCACAGCCCCGCACCAAGGGGTGCTGTATGCTCTAGGCATCCCCTCCCCCAGGGGATTTTCTAAGTAGATGGGGGGACACGGTGAACTGGCTGTGTCCATCTTTGTCACTGAGTGAAATCTCTGTTTTCTATTCTCTGAGAAGATAAGTTTGTATGTTCTGAGAATAAATACATGAATATTAAGACTGTTA