Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name TBPL1
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name TATA-box binding protein like 1
Also known as MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2
Coordinate chr6:133952174-133990432
Strand +
Gene summary This gene encodes a member of the TATA box-binding protein family. TATA box-binding proteins play a critical role in transcription by RNA polymerase II as components of the transcription factor IID (TFIID) complex. The encoded protein does not bind to the TATA box and initiates transcription from TATA-less promoters. This gene plays a critical role in spermatogenesis, and single nucleotide polymorphisms in this gene may be associated with male infertility. Alternatively spliced transcript variants have been observed for this gene, and a pseudogene of this gene is located on the long arm of chromosome 3. [provided by RefSeq, Nov 2011]

Retrocopy(s) from TBPL1

Retroname Coord Strand Genomic Region ENSG
TBPL1P1 chr3:172522227-172522901 + Intragenic
ENSG00000224611 UCSC

Expression

Transcript Sequences

>NM_001253676.2
GTTACGCGATTTTCGCTCCCGCGGGCAGCGCCTCTCAGGCCACTCCCGAGGGACCCCGAGGACGCACTCGGGCCCCAGGGCGACGGTTCAAACGGGCCATTGTGCGCCCCCGGGGTCCCCCGGCCCCTGCAGGGCTACTTGGGCGCAGAGCCGCGGAGGGTCTCCGTTCCTAGAGGTCCTCCTATCCCGGGCTGCCTGAGTCCTCGCCAGCATCCGCCCTCTCCCACTCCCATCCTTCCTGGATCCGCCTCTCGGTTCCCGAGGGACAGTCCCGACCGCAAACCCACGTAGAGTAAGGAATGTGGGACAGGCGACAGAAGTGGCATACGGTCCTGCGTTATCCCTCCGTCTCGCCACACCTTGTGTCTCCATCTCTCCCCACTTCCTTCCCTCCGTCTGTCATCTGTCATCCCCGGTCGCTCTAAGACCAGGATTCCAATTCGCCTAGTGAGGAATCTCACTAGGGGAATTTATCGCGACATCATAAattaacgggttcattttgactgaaaaagcgaaggacttttttcaggcagaaaacaagtctcgtctggacgGATGTGATCTTCGTGGTGGAAAGCTAAATTTTAAAACCACCCCAATGGATGCAGACAGTGATGTTGCATTGGACATTCTAATTACAAATGTAGTCTGTGTTTTTAGAACAAGATGTCATTTAAACTTAAGGAAGATTGCTTTGGAAGGAGCAAATGTAATTTATAAACGTGATGTTGGAAAAGTATTAATGAAGCTTAGAAAACCTAGAATTACAGCTACAATTTGGTCCTCAGGAAAAATTATTTGCACTGGAGCAACAAGTGAAGAAGAAGCTAAATTTGGTGCCAGACGCTTAGCCCGTAGTCTGCAGAAACTAGGTTTTCAGGTAATATTTACAGATTTTAAGGTTGTTAACGTTCTGGCAGTGTGTAACATGCCATTTGAAATCCGTTTGCCAGAATTCACAAAGAACAATAGACCTCATGCCAGTTACGAACCTGAACTTCATCCTGCTGTGTGCTATCGGATAAAATCTCTAAGAGCTACATTACAGATTTTTTCAACAGGAAGTATCACAGTAACAGGGCCCAATGTAAAGGCTGTTGCTACTGCTGTGGAACAGATTTACCCATTTGTGTTTGAAAGCAGGAAAGAAATTTTATAATTCACCACTTAATTGGTTAGAATCTCTAACTGAGCACCTTTTAAACCTGCTGCACATTGGACTCAAAAGGAAAACTGGACCAACAATAATTGAGGAAATAGACTCTTTTATTCATTCACGGCTACAGTGTAAGCTCCAGTCCCTTTGGATTTTATTCCAAACCTTGCTGTAATATAAAAGGAAGTTTACAAGACATGATATTGCTGCTTTTACAAAAGGACATTCTATTTATTTTCGCAGTAATTCTCATGTCCCCATAAGCAGAGCTGTCACAGTGTGCACTACCTTAGATTGTTTTATTGTCGTCATTGTTATTTTTTTCCATTTTGAGCTAATGTGTTTTATTTGTGAATAGTCTTTTACATTTTTGTATGCTGAATATGGGCACCAAAGAACCTGTAAAAGTTATCTTTTTCAATTGAATGTGCACAAATAAAAGTTTGGAAAAGATCTCTCTTCATTCTATAACTTTTATTCCCCATTTTCTATTTTAACAAAAATTGTATTCATACTTCTTTTTTTTAAAATCTATGCAAGCTTAAGACTTTGGCTAAAGTGTGTTGGCTTCTTTTTGAAGTGTATTTtgtgtgtgtgtgtgtgtgtgtgtgtatatatatatatatatatGCACCACATGTGTATAGTATCTTTTAATGCTCTGTTACCAAATAACAAATAGGAATTTTTTTTCTTGCAGATTAGAAATAAAAACGTGTATATAAACTCTAGGGAACCAGACTAGAAGTTTATAGATAAAGGATAATGTTTTATGTTGCTAATTTAATATGATAGAAAATGTTAAATAACTTGTAAAGGTTAAGAAATTGTAGTTTTAAGAAGAGAAACCTCTTACCCACTAGATGGAAATGAGAAAGAAGCTGTGATGAATGGTGCCTCATTTGGACCTTTGTTTTTCTGGAAAGACTCAACACCTGTAGTTGTAGAGAAGTGATTGAGGTTCTTGACTTTAATCTTGGGTTGATGCCCAAGCCTATACTAAGAGTCTTGTCAGAAGTTGGTAACATGGAGATGTTTTAACAAGAAGTGCCCATAAGCTGCCTCTGTGCCACAGTGTAATTATCAAATAGCCCCACTTGAATTTGAAAGCCATTTTGTGTGATACTGTCCTTCCCCTTGCTGTATCTTATTTAATGGAGTTAAAGAGTGACTATTCAGTATATGAGATTGCTACTCTTAAAGTTATAATAAATATGCATTTATGAAACAGTGTCTCTGGCTCACCCAGGAGCCCTGATGTGGTAATACAGGATCAAGCTGTAGTTGTGCCCTGTCATTTAGGTTTAGGAGTTTAGTGTAACCAACAGTGATTATACCTAGAAATAAAGCTGAGTGGAGAGTCCAATTAGCTTCTCAGGAGAAACTTAATGGGGACAATATTCCAACACAATGTTCCACAAAAACTTGTATTTCCAAAATGTTTTTAAACCTTTGTGGAAAAATTGCAACATCCTAATCTCCATATATAGTACATTTTCCTTACTGTATTATAAAATCTTGAAAACCTAGCTTAGGCACTGCACTGAACAACACATATTATTTTTATCTTTTTTCTTCTCAATGCCTTCCCTAACCTCCTGCTTATTCCAAAGTGGAAAGCAAAGGCTAACTTACATTTTTCCTTCTTGTGAAATATTTCATTGAGATTTTTAGACTTGTATTTTTCCTTTTTTTTAAAAAAAAAGTGTTTATTTCCTTTATTTTAAGATTCAGTAGGATAGCCAAATTCATAGAGAATAAAATTACATGAAAGAGTTACAAGCTCACTGTTTTAAAGACTTGACATTTTTCATTTAGTTTTAATTAACAGTAATAAGTCACCTCCTGTTTTTCAATGTTCACCAAAAAAAGAAACATAGAATAGGGGGAAAACATGCTTATATAGCCAAGGTACAGATCCAGATGATGTAACCTTTTTAGTATTCGCATGACTTGAAAACTGGGCAGATCAATAGATAATCGAAGTGCTTTATCTGAAGGGAGAGGGTAAAGACAGTGTGACCAGGTTTGTTTTCAGGGCTGCCGAATGAGCCTCACCTAACAGTGTCCATGGGTAATTCGCTAACCTTAACAAAGATGGGAAGAAGTGAGTGCTCTGATGTCTTCTGCTGGCTCTCCATAAGTACTGTAAATTTTTTTTATAAATAAAAACTGTGAATATATATGTACAAGTTGTAAGTATTTCCCCCTTTTTATTTTTGAAAATCAAGAAGCTTGATTTGGTGTGGTGCAATGGATATTGGATAAAAATTTGAAGACAAAATTGTTTAGTTACAGACTCAGGATAATAAAAGAAAAATATAAAAGAATGCTCAAGATACTGAAGTCAAGGTCACTAGTAATAAACTGGCTAGGTTGATAAACAATTTCCTGCCCATTTATAATGAAGGGCTAAACAAAAAATACCTGAAGTATATATAGAGTTTGAACTATAAACACGGAAGGAAACATGGGGCAGAACACACTTCCCTTCTCTTTCCAAAAACAAAAAACAATGCATGCTCTGATTTGCGTATGAAATACACCATGATAGAATTGAGATCTCCAATCTCCTTTCCTTTTAGCTTCCCCCTGCCAATTTTTATACAGATAATACACTGCAGATCCAGGCCTTTTAGTCAGTCTCCTGAGTCTCTGATATAGTTTTACTACTTACATAGGTTTATAGTCTCTCCACATTGTTATAAAGGAATGTAATAGATCATGTTTCCTTATATGACATTGGGACAGTTTGTTAGGAACCAATAGGAAAATTCCAAGCTAAATAAAAAGGAGCTTTGGCTCTTAGGATTCTCTTTTCTTCAGGTTAATCATATTTTAAAATTCTTTTTCAAGTTAGGTTGTTCGTGCTTTTAAGTTTTTTGTGTGTCTTCCATCACTTAAATATTAGTAATTTAATATGTTATTTGGTTCAAGATTTGATTGTGGATTTTCTATCATACCCAAATTTTATTAGTAAGACCTCTTAACAAGTCTTTAAAATCAACTGGAGAAGTAAGAGAACAGTTCATCGTTGTGTGGGTGAAACCCACGTTGCTGGTACAGGTGGCCATCATAGAAAAGAACATGAGGGAATTGTCCTGATGTCTGAATGTCATTTATTGTGTCTTCAGTTATCTGAACATCATCATCAATTATAGCCTGTGTACCGTAACCTGAGGTAGTGATATTCCTGAGGAGTGTGAAGAATTGGACACTGTGGATTACTATACATTGTCATGAAAGCCTTACAAGGAGGCAGCTTTTCTAGGCTTGACTTAATAACTTCAACCTAATTGCTTAGAGATTTGGATAAATAACCTAATGGCCTGACTCCTTTTCTAATGTTTTACTAACAGCTACTTCTAAATAAATATGGTCCCAGGATTTTAAAA