Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name CIR1
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name corepressor interacting with RBPJ, CIR1
Also known as CIR
Coordinate chr2:174348022-174395712
Strand -
Gene summary Enables histone deacetylase binding activity; protein kinase binding activity; and transcription corepressor activity. Acts upstream of or within negative regulation of transcription by RNA polymerase II. Located in nuclear speck. Part of protein-containing complex. Colocalizes with centrosome. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from CIR1

Retroname Coord Strand Genomic Region ENSG
CIR1P2 chr4:114713441-114714945 - Intergenic
ENSG00000250215 UCSC
CIR1P1 chr5:154559314-154560518 - Intergenic
ENSG00000253146 UCSC

Expression

Transcript Sequences

>NM_004882.4
GCTGCTGGAAACGCAGTTCCGGTTAGGCGGCTGAGTTTGTTTACGTTGCTAACAGATCTAGCCCCTGCTTTCCCTAGTTCCAGTTCCAAGATGGGGAAATCCTTCGCCAACTTCATGTGCAAGAAAGACTTTCATCCTGCCTCCAAATCCAATATCAAAAAAGTATGGATGGCAGAACAGAAAATATCATATGATAAGAAGAAACAAGAAGAATTGATGCAGCAATATCTTAAAGAACAAGAATCATATGATAATAGATTGCTTATGGGAGATGAACGTGTAAAGAATGGCCTTAATTTCATGTATGAAGCCCCACCAGGAGCTAAAAAAGAAAACAAAGAGAAAGAAGAAACAGAAGGAGAGACCGAATACAAATTTGAATGGCAGAAAGGAGCCCCACGAGAAAAATATGCCAAAGATGACATGAACATCAGAGATCAGCCCTTTGGTATTCAGGTTCGAAATGTGAGGTGCATTAAATGTCACAAATGGGGTCATGTCAACACAGATCGAGAATGTCCTTTGTTTGGTCTTTCTGGAATCAATGCAAGTTCGGTTCCCACTGATGGCTCAGGGCCATCGATGCACCCCTCGGAGCTAATAGCGGAGATGAGAAACAGTGGGTTTGCACTGAAACGAAATGTACTGGGGAGAAACTTGACCGCAAATGATCCATCACAGGAGTATGTTGCAAGTGAGGGTGAAGAAGATCCAGAAGTTGAATTTTTAAAGTCACTAACAACCAAACAAAAACAGAAACTTCTCAGGAAATTAGATCGACTGGagaagaaaaaaaagaaaaaagatagaaaaaagaaaaaGTTTCAGAAGAGCAGAAGTAAACACAAAAAACATAAGtcctcttcttcctcatcttcctcctcctcctcctcttcctcTACTGAGACTTCAGAAAGCAGTAGTGAGAGTGAGAGTaacaataaagaaaaaaaaatacaaaggaagaaaagaaagaaaaacaaGTGTTCAGGGCATAACAACAGTGATTCTGAAGAGAAGGACAAGTCTAAGAAGAGAAAGCTTCATGAAGAACTTTCTAGCAGTCACCATAACCGGGAAAAAGCCAAGGAAAAGCCCAGGTTCTTAAAACACGAGAGTTCTAGGGAGGACAGCAAATGGAGCCATTCTGATTCTGACAAAAAGTCCAGAACCCATAAACATAGCCCAGAGAAGAGAGGCTCTGAAAGAAAGGAGGGGAGCAGCAGAAGCCACGGCAGGGAGGAAAGGAGCCGGAGAAGCCGGAGCAGAAGTCCTGGTAGTTACAAGCAAAGGGAGACAAGGAAACGGGCACAGCGAAATCCTGGTGAAGAGCAAAGCAGAAGAAATGACAGCAGAAGCCATGGCACAGACTTGTATAGAGGAGAAAAAATGTACAGAGAGCACCCAGGAGGTACACATACTAAAGTGACACAAAGAGAATGAAGCAGAAGTAGAGAAGAAAGACTGTATGTGACAATTACCTGGGAATAAAAATATCTCCACTTTTTTATTGAATACCTTTAGCAAGGGGTAAATTATGTACTGTTGTCTTTCTAATAAAAAAGCTCAATTTTAATTTTTCATCTCTAGACTGTCAATTCAAGTACAAAACTACATGAGTACTATAAGAATGAATTTTGCAAATATTTGTAAGTAAGCTATTTTGGGGCTGTGGAAATATTTTCTGTTGGTAACTGTTTCTTGTTCCCCATACCAGATAAAAACCGCATATAACTCTGTGACATTTTCTTTGTTCTGAAACATCATTAAAAGAATGACAGTACATTGAATGGGTATAATTTACTTTTTTCAATTCAAATTTGTTATTCTAGGATTTGAATTTGCTTGAAGTGAATTGTAATAATTATTCAAATTCATTAGTATAAATTAAGGATTAATAAATCTTTAAGACTTTTAA