Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name VPS26A
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name VPS26 retromer complex component A
Also known as HB58|Hbeta58|PEP8A|VPS26
Coordinate chr10:69124178-69174412
Strand +
Gene summary This gene belongs to a group of vacuolar protein sorting (VPS) genes. The encoded protein is a component of a large multimeric complex, termed the retromer complex, involved in retrograde transport of proteins from endosomes to the trans-Golgi network. The close structural similarity between the yeast and human proteins that make up this complex suggests a similarity in function. Expression studies in yeast and mammalian cells indicate that this protein interacts directly with VPS35, which serves as the core of the retromer complex. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]

Retrocopy(s) from VPS26A

Retroname Coord Strand Genomic Region ENSG
VPS26AP1 chr3:113919151-113920504 + Intragenic
ENSG00000240375 UCSC

Expression

Transcript Sequences

>NM_004896.5
GAGGTCACGTGACGGAGCGCCGGAGCGGAGGGAGCCGGGGCTGGGAGTTCTCCTGAGGGAAGAGGAGTGGAGTAGGGGGGACGCGGCGGCGGCGTTGACAATGAGTTTTCTTGGAGGCTTTTTTGGTCCAATTTGTGAGATCGATATTGTTCTTAATGATGGGGAAACCAGGAAAATGGCAGAAATGAAAACTGAAGATGGCAAAGTAGAAAAACACTATCTCTTCTATGACGGAGAATCCGTTTCAGGAAAGGTAAACCTAGCCTTTAAGCAACCTGGAAAGAGGCTAGAACACCAAGGAATTAGAATTGAATTTGTAGGTCAAATTGAACTTTTCAATGACAAGAGTAATACTCATGAATTTGTAAACCTAGTGAAAGAACTAGCCTTACCTGGAGAACTGACTCAGAGCAGAAGTTATGATTTTGAATTTATGCAAGTTGAAAAGCCATATGAATCTTACATCGGTGCCAATGTCCGCTTGAGGTATTTTCTTAAAGTGACAATAGTGAGAAGACTGACAGATTTGGTAAAAGAGTATGATCTTATTGTTCACCAGCTTGCCACCTATCCTGATGTTAACAACTCTATTAAGATGGAAGTGGGCATTGAAGATTGTCTACATATAGAATTTGAATATAATAAATCAAAGTATCATTTAAAGGATGTGATTGTTGGAAAAATTTACTTCTTATTAGTAAGAATAAAAATACAACATATGGAGTTACAGCTGATCAAAAAAGAGATCACAGGAATTGGACCCAGTACCACAACAGAAACAGAAACAATCGCCAAATATGAAATAATGGATGGTGCACCAGTAAAAGGTGAATCAATTCCAATAAGGCTATTTTTAGCAGGATATGACCCAACTCCAACAATGAGAGATGTGAACAAAAAATTTTCAGTAAGGTACTTTTTGAATTTAGTGCTTGTTGATGAGGAAGACCGGAGGTACTTCAAACAGCAGGAGATAATTTTATGGAGAAAAGCTCCTGAAAAACTGAGGAAACAGAGAACAAACTTTCACCAGCGATTTGAATCTCCAGAATCACAGGCATCTGCCGAACAGCCTGAAATGTGAACTGAACAGGAGAAAAAAAGAAAAGCAAAAAACTCCTGTAACCCTTGAGATTAAGTTCAGCAGGTTAAAGATGGTTGCAGCTGGAGGGGGCGGAAAAAGGCCAAAACTCCATATATGTTAGTCTTCCTTTATCTTACAGCGCAGCATTTATTTTATGATATAATGAAATGTTCGTTCATGTATATACATTTTTAAAAGTGCTTTCTTTGAAACACTGGAACTTTGTTAAGCTGCCTTTTTTTTTTTAACTTCCTACTTTGATGATAAGCACTCAGATATATATCAGCGTAAACATGAAAAATTTTCATGTGAGTAGGCTGGTATTTGTAATTTTGCTTTCTTTCTGCATAATGTTGATTATAAATCCTCTCTTTTCAGGCTAATGATTACCTCTTATTCTCTACATGCAAAAAATTAAATATTTTGTGTTCAAATAAAATTAGAAAACCTGAGTGGCCTCTTGTGTCCTGCAGAGATTTAAAACATGGCATCTCAATATTTTTGAGAACTACATTTGTTTTTAACATATGTGTTTGAGAAAAGCATATGGAGTGTTTCACCGCAGGCACTTCTGAGTACCATTCCATGGCTTCCAGAATTTTATCCTCTTTGAGGTCTTCTGTGCTATGAATATTAGATTTCTTTCCCCAAGGGATTATGTGGCAGGTCATTATGGCCTTCTTTTTTTTGGCCATATTAAGTAACAGTTTTGCTATATTCCAGTAGTACCGTTGTGTGTTTTCTGCAATGTGGAGTTGACTTAGCTTGGCATTTTAGATTTGTTAAAACTATTTTTTCCATAAATACTTTGAAACATATTTATATATTTCAATTTAAGGAATCTTTTTGCCATGTGTATGCAAATATTATTTTCTTCATACATTCATTTTCTTTTCAGGGGAAAATTTTGGGATGGGGGACTCAGGAGGACCTGTGAAGCATGTAGTTATCTAGATCTGGGTAATTTCATGTTTATTAAACTCGAACTTTGGCTAGTTAAACTCATATTGAAACTTCATCTAGTCTCTTAATTTTTTAACACTAAATTCAAGTCATTTGTTTTAAGTCTCTAAAAAAGAAGATTGCAGTCATCCATTCATATGCATGGGGTCTGATCGCAAATACACTAAATGTGGAGTGTAGGAACCAAAATGAAACCTGCTGTATGGAAACTACTTTCACTTATGGTTCATTGGTTTTTGTACCAATATTTTTTATGCACTTCAGTGCAAGTCTTGTCAGTTAACCTTACTTTATGAGTAAGCTAAATAACCCAAATTACATTTCTTTAAACCTGTTTTACTACTATGGCACTTTGATAAAATGGTCAGGAACCAACTTTACTGGCAAAAGGGTCCATGTACCACCATGTGCTGGAGCATCTGTTCTACATGTGGATATCTATGAATGGTAATGTTTTCCTTCATGTAAGTGCCTATTCAGAGTTTCAGAATTTTAAAATGCCAAATATTTTCATGGTCATTTGCATGTAGTAAGCCAGAAAATATTCAAAGAGATTTTGAAAACCAATTGTATTTAACCAGCCTCAAATTGTGCAACCATGATGTATAATAAAGAATTTGAAACAGAAACTGAGCTTGCTGTTTGCATGATTAAAATAGCTCTGTTCTCAAATCTCTTCTCATTGTTAGATTTATTGTCGAGGATAGGATTGTTCAATAGTTTAGGAAGCTGTAACTGTGATAATGAATTTTTATAAATATTACTGGTTTCAATTTTAAATAGATATATAATGCTTTTAATAGGCTGGCTTAAAACTGTCATATACAGGATGCCTATCCGTTTTGCTCAAGACTTTTTGTAGCATAACCAATTTGAAAAAAATTCAAATTTAATATTTGGTGATTTCAGTCAAAAGTCAGCCAGCTAATTAGAAGTCATAAACTGAAAAAGAAATTTGTGTCTTTAATGAAGAGTTACAATGTCTAATCcattggttctcaaccctggctgcatatcagaatcaccttagaagcttttaaaataaccaggcccgggtcctactctgaccaataaaataagaatctcagagactgggccataagcattaAAAACAAAACAACCTCAAAAAAATAcctgtcatctcagccacttcaggagtctgaggcggaaggatcacctggaattcgagaccagcctggccaacaaaaatgagaccctatctctacaaaaaaattaacaatgagctgggcatggtggcatgcacctgtatttccagctatttaggaagctgagacaggaagatccctttgagaggtgaagccagctggacttctgagttgcgtggggacttggagaacttttctgtcttacaaggggattgtagaatgcaccaatcaacactctagctaggattgtaaaacgcactctggctagctggaggtttgtaaaatgtaccaatcagtgcttgtgaaaacgcaccaatcaggctgggcacagtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcacctgagttccaggagttcgagaccagcctgaccaacgtggagaaactccatctctaccaaaaatgcattagtcgggcgtggtggcacatgcctgtaatcccagctactagggaggctgaggcagaattgcttgaacccgggaggcagaggttgcagtgagccgagatcacaccaatgcactccagcctggctagaagtttgtaaaatggaccaaccagtgttctgtagaatggaccaatcagcaggacgtgggcggggacaaataagagaataaaagctggccaccccccagccagcagcggcaaccggctcgggtccccctccatactgtggaagctctgttctttcactcttcacgatacatcttgctgctgctcactctgggcctgtgccacatttaagagctgtaacactcaaggcgaaggtccacggctccgttaagtcagcgagaccgcaaacccactggaaggaaccaactctggacacaccttgagtacacgaatttgaaattacactgaggtgatcatgccactgcactgtagcttgggtgacagagacaccatgtctcaaaaaTCTACCCAGAGTTGGGAACCACTGATCTAAACCATTAAAATTTTTATTTCTGTCACTAA