Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RBM39
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name RNA binding motif protein 39
Also known as CAPER|CAPERalpha|FSAP59|HCC1|RNPC2
Coordinate chr20:35701347-35742262
Strand -
Gene summary This gene encodes a member of the U2AF65 family of proteins. The encoded protein is found in the nucleus, where it co-localizes with core spliceosomal proteins. It has been shown to play a role in both steroid hormone receptor-mediated transcription and alternative splicing, and it is also a transcriptional coregulator of the viral oncoprotein v-Rel. Multiple transcript variants have been observed for this gene. A related pseudogene has been identified on chromosome X. [provided by RefSeq, Aug 2011]

Retrocopy(s) from RBM39

Retroname Coord Strand Genomic Region ENSG
RBM39P1 chrX:44029124-44031791 + Intergenic
ENSG00000214019 UCSC

Expression

Transcript Sequences

>NM_184234.3
atgtgtgctggtgaatgtgagtACAGGGAAGCAGCGGCCGCCATTTCAGGGAGCTTGTCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAAGCCGCCGTCCTGCTCTCCCGCGTGGGCTTCTCTAATTCCATTGTTTTTTTTAGATTCTCTCGGGCCTAGCCGTCCTTGGAACCCGATATTCGGGCTGGGCGGTTCCGCGGCCTGGGCCTAGGGGCTTAAcagtagcaacagaagcggcggcggcggcagcagcagcagcagcagcagcaATCTCTTCCCGAACACGAGCACCACAGGCGCCCGAAGGCCGGAACAGGCGTTTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCTCCTTACAAGAAGGATGAGAACAAGTTGAGCAGTGCCAACGGCCATGAAGAACGTAGCAAAAAGAGGAAAAAAAGCAAGAGCAGAAGTCGTAGTCATGAACGAAAGAGAAGCAAAAGTAAGGAACGGAAGCGAAGTAGAGACAGAGAAAGGAAAAAGAGCAAAAGCCGTGAAAGAAAGCGAAGTAGAAGCAAAGAGAGGCGACGGAGCCGCTCAAGAAGTCGAGATCGAAGATTTAGAGGCCGCTACAGAAGTCCTTACTCCGGACCAAAATTTAACAGTGCCATCCGAGGAAAGATTGGGTTGCCTCATAGCATCAAATTAAGCAGACGACGTTCCCGAAGCAAAAGTCCATTCAGAAAAGACAAGAGCCCTGTGAGAGAACCTATTGATAATTTAACTCCTGAGGAAAGAGATGCAAGGACAGTCTTCTGTATGCAGCTGGCGGCAAGAATTCGACCAAGGGATTTGGAAGAGTTTTTCTCTACAGTAGGAAAGGTTCGAGATGTGAGGATGATTTCTGACAGAAATTCAAGACGTTCCAAAGGAATTGCTTATGTGGAGTTCGTCGATGTTAGCTCAGTGCCTCTAGCAATAGGATTAACTGGCCAACGAGTTTTAGGCGTGCCAATCATAGTACAGGCATCACAGGCAGAAAAAAACAGAGCTGCAGCAATGGCAAACAATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTTTATGTGGGCTCATTACACTTCAACATAACTGAAGATATGCTTCGTGGGATCTTTGAGCCTTTTGGAAGAATTGAAAGTATCCAGCTGATGATGGACAGTGAAACTGGTCGATCCAAGGGATATGGATTTATTACATTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACAACTTAATGGATTTGAACTAGCAGGAAGACCAATGAAAGTTGGTCATGTTACTGAACGTACTGATGCTTCGAGTGCTAGTTCATTTTTGGACAGTGATGAACTGGAAAGGACTGGAATTGATTTGGGAACAACTGGTCGTCTTCAGTTAATGGCAAGACTTGCAGAGGGTACAGGTTTGCAGATTCCGCCAGCAGCACAGCAAGCTCTACAGATGAGTGGCTCTTTGGCATTTGGTGCTGTGGCAGAATTCTCTTTTGTTATAGATTTGCAAACAAGACTTTCCCAGCAGACTGAAGCTTCAGCTTTAGCTGCAGCTGCCTCTGTTCAGCCACTTGCAACACAATGTTTCCAACTCTCTAACATGTTTAACCCTCAAACAGAAGAAGAAGTTGGATGGGATACCGAGATTAAGGATGATGTGATTGAAGAATGTAATAAACATGGAGGAGTTATTCATATTTATGTTGACAAAAATTCAGCTCAGGGCAATGTGTATGTGAAGTGCCCATCAATTGCTGCAGCTATTGCTGCTGTCAATGCATTGCATGGCAGGTGGTTTGCTGGTAAAATGATAACAGCAGCATATGTACCTCTTCCAACTTACCACAACCTGTTTCCTGATTCTATGACAGCAACACAGCTACTGGTTCCAAGTAGACGATGAAGGAAGATATAGTCCCTTATGTATATAGCTTTTTTTCTTTCTTGAGAATTCATCTTGAGTTATCTTTTATTTAGATAAAAATAAAGAGGCAAGGATCTACTGTCATTTGTATGCAATTTCCTGTTACCTTGAAAAAATAAAAATGTTAACAGGAATGCAGTGTGCTCATTCTCCCTAAATAGTAAATCCCACTGTATACAAAACTGTTCTCTTGTTCTGCCTTTTAAAATGTTCATGTAGAAAATTAATGAACTATAGGAATAGCTCTAGGAGAACAAATGTGCTTTCTGTAAAAAGGCAGACCAGGGATGTAATGTTTTTAATGTTTCAGAAGCCTAACTTTTTACACAGTGGTTACATTTCACATTTCACTAATGTTGATATTTGGCTGATGGTTGAGCAGTTTCTGAAATACACATTTAGTGTATGGAAATACAAGACAGCTAAAGGGCTGTTTGGTTAGCATCTCATCTTGCATTCTGATCAATTGGCAAGAAAGGGAGATTTCAAAATTATATTTCTTGATGGTATCTTTTCAATTAATGTATCTGTAAAAGTTTCTTTGTAAATACTATGTGTTCTGGTGTGTCTTAAAATTCCAAACAAAATGATCCCTGCATTTCCTGAAGATGTTTAAACGTGAGAGTCTGGTAGGCAAAGCAGTCTGAGAAAGAAATAGGAAATGCAGAAATAGGTTTTGTCTGGTTGCATATAATCTTTGCTCTTTTTAAGCTCTGTGAGCTCTGAAATATATTTTTGGGTTACTTCAGTGTGTTTGACAAGACAGCTTGATATTTCTATCAAACAAATGACTTTCATATTGCAACAATCTTTGTAAGAACCACTCAAATAAAAGTCTCTTAAAAAGGCCACAGGAGATCTTCATTTTTCAAATGTTTTAAAGTTACAGAAATTTGAGAACAGAATTAGCTTCTTTTAGTCTCAATTCAGTACTTGCCTCTTGGGAAAATGTTCCGAGTCTGCGGAAACTTGCCCTCACGTTGTCCCCCATGAATTCCTTTATTCTATTAGAGTCTAGCCCTGTGTATTTTAGAAGAATGTATCAAAACTGAGGGGTTTACCAAAAAGAAAAGGAAACAGCCTGGCCTTAAAACCTGGGCATTCTTGGTCTCCTGCATTGTCTGGGCATATTTATGAAGAAATTTTCACCATTTACAATACATACTTAACAAAATGGCTTAACTTCAAACTGGTTTCCAAAATTGATTTATATATTAATATATTAAATAAGGTGCATATATTACTGTATTAAGGGGTTTTGAGCTTTCATACTAGTTGGGAAGCAAGCTGTCACCATTTATACTCAATTCTCTTCAACTGTTTATCTCTTGGTAAATCTTTTGAGTAGGAAATGCTGCTCCTAGCTTATCTTCAAATACTGAGTTCCTTACCTCATTTGTTCAACTTTTTTTTTTGTTAGCATTGAAGCACAAGTTTTACAGGCTTATTCAGAATTTCATATCAGTCGTTTTGTTTGACATTTATCCCAATAATTGTTCTAGTGATTTAATTTGTATGGAAACTCCCAAGGTTCAAtttctttttctttttgagatggagtcttgctctttggcccaggctggagtgcagtgatgtgatctcagctccatctcccaggttcaagcaattctcccacctcagtctcctgaagagctgggacaggtgcgcaccaccgtgcccagctaatttttgtatttttagcagagacggtgttagcccggctggtctcacactgacctcaagtgatctgtccgccttggcctcccaaagtgccgggattacaggcatgagccaccgcgcccagccTCATTGAAAATTTACTTTTCAATACCAGACTGCAGAGTTCTTTGGGGCAGAGACACTCTGTCAGTGTGCTCTTTTTCCAAAGTATCTCCTGCTATCAGTTTTTCCCCTTGAACCAAGTCTTCCTAACAAATTTGTTGTGTCATTGCTTTCTAGGGAACTGGACCAGCAAATGTGGCCTTTAGTGGTTAATCTCATCTGTGCCAAAATTTAGTTGCTACCAGAGTGAAATTTGGTGTGTAAATAATGTTCAGAGGAAATGTGGTTGGAGTGTAGTAACTTGAATAGTGTCGTGCATAGAAAACAGCTCATTCTGAGTGAAACTGTTTATGTCCAATCAGTTCCTGAGTCAGCATCCCACTGGTTCGAAAATCTGTAACTAATCTGGTAATGTCCTTAATTTCCTCCTGCCTGTCAGTGTTCCAAAGTGTTCATCTAGTTTTCTTTTATCTTTATAATAATTACTACCATCTTTGAAAGTTCTGTTTAAGAAATGCTTAATGGGCAATGCGGGTTAGTAACTCCAGGGTCTGCGTGGCCTGGGCAGGTGAGATGGACAACTGCCTCATTACAGAAGCTTTTTATCATCAAACTAGTAAGTTTTGTGGAGGGCAAGCTATATAGATTGTTGATGAGTGGTTAGAAAATCATCTGGAATTTAGCCAGTTGAGAAGCTACAGAAGTTTCTATTTTTTTTTACAGTGGATGAACTGTTTTGCTTTTTCTGATAAAGCCACTAGGTATATCTAAATAACAACCTCGggctggacgtggtgccttatgcctgtatatgtgaacactgggaggcggaggcgggtggatcatgaggtcaagagtttgagaccagcctggccaacacagtgaaaccccgtctctactaagaatacaaattttttttgttttgagacagagtctcgctctgtcgcccaggctggagtgcaatggctcgatctcagctcactgcaacctccaccttctgggttcaagcgattctcctgcctcagcctcccgagtagctgggaatacaggcgcgtgtcaacacacccggcttaagtttttgtatttttagtagagacggggtgtcaccgtgttacccaagatggtctccatctcctgaccttgtgatccaccagcctttgcctcccaaagtgctgggattacaggcataagccaccgcgcccagcctaacaatacaaaatttagctaggcatggtggcacgtgcctgttatcacagctactcgggaggctgaggcaggagaaacgcttgaacacaggaggcagaagttgcggtaagccgagatcgtgccac