Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SOCS5
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name suppressor of cytokine signaling 5
Also known as CIS6|CISH6|Cish5|SOCS-5
Coordinate chr2:46698937-46763129
Strand +
Gene summary The protein encoded by this gene contains a SH2 domain and a SOCS BOX domain. The protein thus belongs to the suppressor of cytokine signaling (SOCS) family, also known as STAT-induced STAT inhibitor (SSI) protein family. SOCS family members are known to be cytokine-inducible negative regulators of cytokine signaling. The specific function of this protein has not yet been determined. Two alternatively spliced transcript variants encoding an identical protein have been reported. [provided by RefSeq, Jul 2008]

Retrocopy(s) from SOCS5

Retroname Coord Strand Genomic Region ENSG
SOCS5P3 chr3:44707168-44711053 - Intergenic
ENSG00000235805 UCSC
SOCS5P2 chr9:135447351-135447872 + Intergenic
ENSG00000224682 UCSC

Expression

Transcript Sequences

>NM_144949.3
GTCCGGAGGAAGCGACGCTGCGCTCGCTGGGCAGTCGGAGGGGACGGGACGCACCGGAGGGCAGGCGGACTCGCCCTGTCGGTGACTGCGCCGTCCGGGCCCGTCCTGCCTGGCCGCAGGTGCCCTGGATGAGGCCGCCCCGCGCGCCCCAAACGATTTTATAATCAATGGATAAAGTGGGAAAAATGTGGAATAACTTCAAATACAGGTGTCAGAATCTCTTCGGTCATGAGGGAGGAAGCCGTAGTGAAAATGTGGACATGAACTCCAACAGATGTTTGTCTGTCAAAGAGAAAAACATCAGCATAGGAGACTCAACTCCTCAGCAACAAAGCAGTCCCTTAAGAGAAAATATTGCCTTACAACTGGGATTAAGCCCTTCGAAGAATTCTTCAAGGAGAAATCAAAATTGTGCCACAGAAATCCCTCAAATTGTTGAAATAAGCATCGAAAAGGATAATGATTCTTGTGTTACCCCAGGAACAAGACTTGCACGAAGAGATTCCTACTCTCGACATGCTCCATGGGGTGGGAAGAAAAAACATTCCTGTTCTACAAAGACCCAGAGTTCATTGGATGCTGATAAAAAGTTTGGTAGAACTCGAAGTGGACTTCAAAGGAGAGAGAGGCGCTACGGCGTAAGTTCTGTACACGACATGGACAGTGTTTCCAGCAGAACTGTAGGAAGTCGCTCTCTAAGACAGAGGTTGCAGGATACTGTGGGCTTGTGTTTTCCCATGAGAACTTACAGCAAGCAGTCAAAGCCTCTCTTTTCCAATAAAAGAAAAATCCATCTCTCTGAATTAATGCTTGAGAAATGCCCTTTTCCTGCTGGCTCAGATTTAGCCCAAAAATGGCATTTGATTAAACAGCATACAGCTCCTGTGAGCCCACATTCAACATTTTTTGATACATTTGATCCATCTTTGGTTTCTACAGAAGATGAAGAAGATAGGCTTAGAGAGAGAAGGCGGCTTAGTATTGAAGAAGGGGTTGATCCCCCTCCCAATGCACAAATACATACATTTGAAGCTACTGCACAGGTTAATCCATTATATAAACTGGGACCAAAATTAGCTCCTGGAATGACTGAAATAAGTGGGGACAGTTCTGCAATTCCACAAGCTAATTGTGACTCGGAAGAGGATACAACCACCCTGTGTTTGCAGTCACGGAGGCAGAAGCAGCGTCAGATATCTGGAGACAGCCATACCCATGTTAGCAGACAGGGAGCTTGGAAAGTCCACACACAGATTGATTACATACACTGCCTCGTGCCTGATTTGCTTCAAATTACAGGGAATCCCTGTTACTGGGGAGTGATGGACCGTTATGAAGCAGAAGCCCTTCTCGAAGGGAAACCTGAAGGCACGTTTTTGCTCAGGGACTCTGCGCAAGAGGACTACCTCTTCTCTGTGAGCTTCCGCCGCTACAACAGATCCCTGCATGCCCGAATTGAGCAGTGGAATCACAACTTTAGTTTCGACGCCCATGACCCGTGTGTATTTCACTCCTCCACTGTAACGGGACTTTTAGAACATTATAAAGATCCCAGTTCGTGCATGTTTTTTGAACCATTGCTTACTATATCACTAAATAGGACTTTCCCTTTTAGCCTGCAGTATATCTGTCGCGCGGTAATCTGCAGGTGCACTACGTATGATGGAATTGATGGGCTCCCTCTACCCTCAATGTTACAGGATTTTTTAAAAGAGTATCATTATAAACAAAAAGTTAGAGTTCGCTGGTTGGAACGAGAACCAGTCAAGGCAAAGTAAACTCTCCGGTCCCCAAAGGTTGTTAACTAGGTCCGCTTTCATGTGCATCAGACAGTACACCTATAGCAAGCACACGTAGCAGTGTTAGGCTTTTTCATACAGTATGTAAGCTTAGTGTTAGTATCTGTCAGATGCTACCTGCTGTTACTTATTCAGATAAACATGGTGCCTATTGGAACAATAGCGGATAGAGCTACAGGTGTTCAGTAAGACTACAAAAACATTTTGCCTATTTCGCTAACAGTTTGGTTTTTAATGGCTGTGGTATTTGAGTGAGGCAACTCTGGGGCATTTGTTATGAAGAATTCTATTTCTTACTGAAGAACAAATTATTAATATTGGATGAGTATTTCAACAGTGTGACTAATGTTTGAAATTATTTTTTCTAAGAGTTTTTCTATAACCTTCCAAAAGTCGTGATGTTTGTAGTTACTATAAATCAAGCTTTGGAAGTCCAAAAAGAATAAAAGACTGCCTTCCTTTTAGAAAAAAATGCAATTTTCTGGCCACAAGGGCATAGTGCAGTTCACTTACGTGTTGATGTAGTTTATAATCAGACGCCTTTTCTCTTCTGCAAAAGGTACTGTTAAGTAAACCAGATTTTCTAAATAGGCATTCTTAAAATTTCAGACTTACAAAGCTAGTAGTAGAATTTTATTGAAAGGCCTAGGTATTAATTTTTTAAATGAGTGCTTTAACTTAAAACAGGCGTTTGGAATAGCTGCTGCAATGTAGTCTTGTGTGTGATTTTTTTTTAAGTTGATGTGCAGTCTAATTGTTGTTTCATAAAAGTTGGATCTGTTCCTATGCCCAGGATGATTTTGTGAACCGTGAAGTACGTGAGACTAGAAGACGCCCAAACAAGTCAGATAATAGTAACTACAATGGTTGCTGATGTTGAGATTATTGTTGAACTATAATTAATAATTTGGATGGCAGAATTTATCTCTTTTTTGTAAACTCTCATAACTGAATTGCTTAAGTATAATTTATAGAATTTCAGTGCAGTTCATTCTTAATGGAAAATCTGAAACCTAAATTGCAGATTTAAAAGGTACTGTACAACCATTATATCTGTAAATAACTTAGCACCTTTTTGTCACTTAGAATAATATGTACTACTACTTGAGTGAGCGCTTTTGGAAGTTATATCAAGTTCTAGTGTTTGCTTCTTAGTAACTGAACTGAATTTACAGTTCTGTCCTAGACATTTTGCACTAAAGTAGCCGAATCCACTCTCATGTCTTTTCGTTAATGTGCTCTGTACCACTGGTGAGTGCTCCATAGTTTCCTTACCTGCTGCTACAGAATGTTATTTTACATCCCTATGGCTATTGCCAAGGCTACAAAAAAGGAAAGCTATATTTGTATGCAACACTAACCTTTTGACTGCTAATGTATGTTTCTGCTTGCTGTGCCTTGTTATGGCTGCTTTTTTTGTGCTAATAAAGTATGTTTGGTGTTCTCCTTGTATATCTGCTGTTTTATACATTTGCAACAATTTCTCTTGTAAATGGAATGGTTTGGGGTTTTTAAATAAGCATTAACTAACAACCTTTCTATAGTTAATGCAGAGTTAATGAACAGTCTAATATTGACTTATCAGAATAAGCTAACTCTAAATTTAATGCTCTACATCTTATCAGTCATAATTATATATACTGTGGAACAGTATCTGTAGTTACTGCAAATTACTGTACAGTTTAGGTTATAACAGAAAACTGACAGAGAAGTAATAAACCTATTGATTTCTCTGCTTATAAATGAAAGATTGAAACTATCCAATGACATATTATAGTAAATGAGTATCTGTAACCTCCCACTGCATCAGAAGCAGGTTAAATGAAGTCTTGTGAATTTGTAATAGATCAGTACCATTTATTGGTTTGGGGACCATCTTAATTAAAAATAAATGCCCAAAATGTAGAACTTTAACCAAAGACTTGTCCCTTTTAAAGCAAAATGGGGATTGAAGGGACTTATAATTTCTGTTGTTTCTAATTAAAGTCCCTGAAGATCATATACCAAAGTGTTTGAGAACTTCATCCAAACCTACTTTAAAGCATTATGTGCAATTAAGTTGTTATGACATAATTATATTGCCTAATTGTTGGGTCTTTTTTCTTGAGCTTATAATGTACCTGGAAAATAAACCTCTTGAGAAAAAGAAAAGTTCATACTGATTATTGGAAAAGGACTATATATGTGAGCAAGATTGTGTTTTAGAGAGGAAACTTGAAACTCCAAGAAAGCACTTGATGTTTTTATATGCTTGTAGCAAATTGATGTTCTAACTGTAGTTTTATAGAAAGTATTAATGCTTTTATGTATTTCAAAACTTTCATATGTTAAATGGAAATTGTTTTAAATGTGTTTGAGTTTATGTAAGCATGTATACACTGTGCTAAAAGTCACATGTTTCAGTTTGTGTATAATATTAATATGCAATTTTTGGTTTAAATTTTTGTCTTAAAATATTAGTGGCTTACATTTTAAAAAAGAAAAATCACCAGCATGAACTTGCACCTAAGTCTATATTCACTGTGTCCTTTTCTGAATCCCATTGTAGCCTGTCAACTAAATTTGAGTGTTAACGGTCTTTTTAAAGTGCATTTAAATACAAACCAGGAATTTCTTTAGAAGTTGAGATACATCTTTATAGTTGAAATAATTAACCCAAGAAAAGGTTGCTTTGATTTGTACCCATTCTCATTCATTTTCTTCATTCCCTTACACACACACACACACCTCTCCCTTCCGCatacatataagtgtgtattatatatttatgtatgcacatatatacatttatGTTGTTAATATTACTTTAGATGGCATTTCCACCTGATACAAAAACATTTAGAGATCTTATTCTATAGATATTACCTAAAGAGTATTCTTGTACTATTCGAATTTTATTATCTGCACTAAAAGTTTAGCCTTGCTACTTTAGCCTTGTTTATAATACAGTCACCTTACAAAGAGAAA