Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HNRNPDL
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name heterogeneous nuclear ribonucleoprotein D like
Also known as HNRNP|HNRPDL|JKTBP|JKTBP2|LGMD1G|LGMDD3|laAUF1
Coordinate chr4:82422564-82430462
Strand -
Gene summary This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has two RRM domains that bind to RNAs. Three alternatively spliced transcript variants have been described for this gene. One of the variants is probably not translated because the transcript is a candidate for nonsense-mediated mRNA decay. The protein isoforms encoded by this gene are similar to its family member HNRPD. [provided by RefSeq, May 2011]

Retrocopy(s) from HNRNPDL

Retroname Coord Strand Genomic Region ENSG
HNRNPDLP2 chr2:158424723-158426032 + Intragenic
ENSG00000234890 UCSC
HNRNPDLP3 chrX:15551808-15553640 + Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_031372.4
AACAAAGAAGCGAACGCGGGAGCAGGGTGCGCGAGAGCGCGCCCTCCGCAGACAGGTTGAGCGAGCGGGAGAGGCCCGGGGCACGTGCAGAAAGGAGCCCCGCGAGTGGCGCGCCGGGGATGTGAGTGCCCCTTGCCCTCTACTGAATCCAGCCCCCTCCCCGCCCACCGCCTCCGCCTTTGCATAGATACAGTCATCTGGCCAGCCCCCGCCCCTCCTCCCGGCGTCAGCCCGCCAGAGGCCGCGCGGGGCCCGGGCTTCGGCCGATCAGCCCGGGAGGCCCCGCCGCGCCCCCTTGGCCCGCGCGCCCGTGGTCACAGTGGAAGAGGCGCCCGCGCTGCGCTGCCCGGAGGAGCCGTCGCGCGCCCGCTTCCTGTTCGGCTGGTTCCTGCCAGCTCGAGGACAAAACAcgcgtgcgcgcggcgggcgagcgcgctcgccgcCTCAGTCGCCAGCGCCGGGCGCAGTCCGCCTTTTTCCGGAGCAGACTGGCCGCGGTGCTAGTCGGTAGCAGCGGCCGCCGCAGCGGCTCCGCACTGGCGAACCGAGGGCAGAAAAAGGCGGGGTTGACGGCTTTTTGGTAGGAGTGGGCTGGACCGGACGCCAGAGACAAAGGCTCCCAAGGCAAGAGGGACTGTGGCCCTGCGTCGGCTCTGCTCGGGACTGCTGACCCCAGGAATTTACGCCCCTTCGTTTTTCTCTTCTGATTCTTCTCTTCTCCCAAGCCCGCGTCCCCTCACGCGTGGCCTCTCTCCTTGCCGGGAGGGCCGCGATGGAGGTCCCGCCCAGGCTTTCCCATGTGCCGCCGCCATTGTTCCCCTCCGCTCCCGCTACTTTAGCCTCCCGCAGCCTCTCCCATTGGCGGCCGCGGCCGCCGCGGCAGCTAGCCCCGCTCCTCCCTTCGCTCGCTCCCAGCTCCGCCCGGCAGGGGGCGCGCCGGGCCCAGCGCCACGTCACCGCCCAGCAGCCCTCCCGATTGGCGGGCGGGGCGGCTATAAAGGGAGGGCGCAGGCGGCGCCCGGATCTCTTCCGCCGCCATTTTAAATCCAGCTCCATACAACGCTCCGCCGCCGCTGCTGCCGCGACCCGGACTGCGCGCCAGCACCCCCCTGCCGACAGCTCCGTCACTATGGAGGATATGAACGAGTACAGCAATATAGAGGAATTCGCAGAGGGATCCAAGATCAACGCGAGCAAGAATCAGCAGGATGACGGTAAAATGTTTATTGGAGGCTTGAGCTGGGATACAAGCAAAAAAGATCTGACAGAGTACTTGTCTCGATTTGGGGAAGTTGTAGACTGCACAATTAAAACAGATCCAGTCACTGGGAGATCAAGAGGATTTGGATTTGTGCTTTTCAAAGATGCTGCTAGTGTTGATAAGGTTTTGGAACTGAAAGAACACAAACTGGATGGCAAATTGATAGATCCCAAAAGGGCCAAAGCTTTAAAAGGGAAAGAACCTCCCAAAAAGGTTTTTGTGGGTGGATTGAGCCCGGATACTTCTGAAGAACAAATTAAAGAATATTTTGGAGCCTTTGGAGAGATTGAAAATATTGAACTTCCCATGGATACAAAAACAAATGAAAGAAGAGGATTTTGTTTTATCACATATACTGATGAAGAGCCAGTAAAAAAATTGTTAGAAAGCAGATACCATCAAATTGGTTCTGGGAAGTGTGAAATCAAAGTTGCACAACCCAAAGAGGTATATAGGCAGCAACAGCAACAACAAAAAGGTGGAAGAGGTGCTGCAGCTGGTGGACGAGGTGGTACGAGGGGTCGTGGCCGAGGTCAGGGCCAAAACTGGAACCAAGGATTTAATAACTATTATGATCAAGGATATGGAAATTACAATAGTGCCTATGGTGGTGATCAAAACTATAGTGGCTATGGCGGATATGATTATACTGGGTATAACTATGGGAACTATGGATATGGACAGGGATATGCAGACTACAGTGGCCAACAGAGCACTTATGGCAAGGCATCTCGAGGGGGTGGCAATCACCAAAACAATTACCAGCCATACTAAAGGAGAACATTGGAGAAAACAGGAGGAGATGTTAAAGTAACCCATCTTGCAGGACGACATTGAAGATTGGTCTTCTGTTGATCTAAGATGATTATTTTGTAAAAGACTTTCTAGTGTACAAGACACCATTGTGTCCAACTGTATATAGCTGCCAATTAGTTTTCTTTGTTTTTACTTTGTCCTTTGCTATCTGTGTTATGACTCAATGTGGATTTGTTTATACACATTTTATTTGTATCATTTCATGTTAAACCTCAAATAAATGCTTCCTTATGTGATTGCTTTTCTGCGTCAGGTACTACATAGCTCTGTAAAAAATGTAATTTAAAATAAGCAATAATTAAGGCACAGTTGATTTTGTAGAGTATTGGTCCATACAGAGAAACTGTGGTCCTTTATAAATAGCCAGCCAGCGTCACCCTCTTCTCCAATTTGTAGGTGTATTTTATGCTCTTAAGGCTTCATCTTCTCCCTGTAACTGAGATTTCTACCACACCTTTGAACAATGTTCTTTCCCTTCTGGTTATCTGAAGACTGTCCTGAAAGGAAGACATAAGTGTTGTGATTAGTAGAAGCTTTCTAGTAGACCATATTTCTTCTGGATTGTAATAAAATTGTTAGTAGCTCCTTTTACTTTGTTCCTGTCTCTGGAAAGCCATTTTTGAATTGCTGATTACTTTGGCTTTAATCAGTGGTCACCTAGAAAAAGCTTTGTAATCATAACACAATGAGTAATTCTTGATAAAAGTTCAGATACAAAAGGAGCACTGTAAAACTGGTAGGAGCTATGGTTTAAGAGCATTGGAAGTAGTTACAACTCAAGGATTTTGGTAGAAAGGTATGAGTTTGGTCGAAAAATTAAAATAGTGGCAAAATAAGATTTAGTTGTGTTTTCTCAGAGCCGCCACAAGATTGAACAAAATGTTTTCTGTTTGGGCATCCTGAGGAAGTTGTATTAGCTGTTAATGCTCTGTGAGTTTAGAAAAAGTCTTGATAGTAAATCTAGTTTTTGACACAGTGCATGAACTAAGTAGTTAAATATTTACATATTCAGAAAGGAATAGTGGAAAAGGTATCTTGGTTATGACAAAGTCATTACAAATGTGACTAAGTCATTACAAATGTGACTGAGTCATTACAGTGGACCCTCTGGGTGCATTGAAAAGAATCCGTTTTATATCCAGGTTTCAGAGGACCTGGAATAATAAAAAGCTTTGGATTTTGCATTCAGTGTAGTTGGATTTTGGGACCTTGGCCTCAGTGTTATTTACTGGGATTGGCATACGTGTTCACAGGCAGAGTAGTTGATCTCACACAACGGGTGATCTCACAAAACTGGTAAGTTTCTTATGCTCATGAGCCCTCCCTTTTTTTTTTTAATTTGGTGCCTGCAACTTTCTTAACAATGATTCTACTTCCTGGGCTATCACATTATAATGCTCTTGGCCTCTTTTTTGCTGCTGTTTTGCTATTCTTAAACTTAGGCCAAGTACCAATGTTGGCTGTTAGAAGGGATTCTGTTCATTCAACATGCAACTTTAGGGAATGGAAGTAAGTTCATTTTTAAGTTGTGTTGTCAGTAGGTGCGGTGTCTAGGGTAGTGAATCCTGTAAGTTCAAATTTATGATTAGGTGACGAGTTGACATTGAGATTGTCCTTTTCCCTGATCAAAAAATGAATAAAGCCTTTTTAAACAAAATCCAAACTTTTAATCAAGTCTTGATATGTATGACTGAGAAAAAATACACTACATCTAGAGATGATTGAGATGTTTTGCAAAGAATTGAAGGGGGAGTGAGAATTGGTTTTTCTTGCAGGGGCTTTGAACTCTAGATTTGGGCTTTGAACTCTAGATTTAATTCAGATTTCAGGGTCTATCAGTTCACCAACTGATGCAAATTTGAACAGATACTCTAAGGCTAAGTGTCCTAGGTTGGATGAACTGAAGCTACTATCAAGATCTCGTTCCCAAGGATTAATTTAGAACAAAGTAATTGGACAAGTTTATTGGGGAGGGGATAGAAATGAATTCTAAAGTACCTATAACAAATACTCTGTGTATGTTTTTTACATCGTATTTGCCTTTTACATTGTTTAGACCAAATTCTGTGTGATGTTATCCTCGGGAAGAGGATAGAAATTAATTCTAAAGTACCTATAACAAATGCTCGGTTTGTATATGTTTTTATACATCGTATTTGCCTTTTGCATTGTTCAGACCAAATTCTGTGTGATGTTATCCTAACAAAACACCTTAGTAATTTCTTTGGTTAACATGTTAATCTGTAATCTCACTTTTATAAGATGAGGACTATTAAAATGAGATGTCTGTTGGGA