Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Nomascus leucogenys
Full Name N/A
Also known as HMGB1
Coordinate chr9:8704860-8710996
Strand +
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P1 chr1a:65812116-65813298 - Intergenic
N/A UCSC
HMGB1P2 chr1a:75145950-75147060 + Intergenic
N/A UCSC
HMGB1P3 chr1a:84614597-84615763 + Intergenic
N/A UCSC
HMGB1P4 chr2:132158267-132159409 - Intergenic
N/A UCSC
HMGB1P6 chr2:85954553-85955702 + Intergenic
N/A UCSC
HMGB1P7 chr2:87455310-87456737 - Intragenic
N/A UCSC
HMGB1P8 chr3:118993969-118995156 - Intergenic
N/A UCSC
HMGB1P9 chr3:121813975-121814576 - Intergenic
N/A UCSC
HMGB1P10 chr3:54703899-54705399 + Intragenic
N/A UCSC
HMGB1P11 chr6:103783719-103784787 + Intragenic
N/A UCSC
HMGB1P14 chr6:77842721-77843320 + Intragenic
N/A UCSC
HMGB1P15 chr7b:40519580-40520734 - Intergenic
N/A UCSC
HMGB1P16 chr7b:53773297-53774458 + Intragenic
N/A UCSC
HMGB1P17 chr8:97633564-97634757 - Intergenic
N/A UCSC
HMGB1P18 chr9:60799707-60800630 + Intergenic
N/A UCSC
HMGB1P19 chr11:70288439-70289534 - Intragenic
N/A UCSC
HMGB1P20 chr12:14419835-14421134 + Intergenic
N/A UCSC
HMGB1P21 chr12:18874162-18875264 - Intergenic
N/A UCSC
HMGB1P22 chr12:30497966-30500486 + Intragenic
N/A UCSC
HMGB1P23 chr12:93930278-93931456 - Intergenic
N/A UCSC
HMGB1P24 chr13:6671702-6672899 + Intergenic
N/A UCSC
HMGB1P25 chr14:18581196-18582673 + Intergenic
N/A UCSC
HMGB1P26 chr15:13861119-13862317 + Intragenic
N/A UCSC
HMGB1P29 chr16:59311528-59312188 - Intergenic
N/A UCSC
HMGB1P30 chr16:75170899-75171948 + Intragenic
N/A UCSC
HMGB1P34 chr19:8561539-8562716 - Intergenic
N/A UCSC
HMGB1P35 chr20:44484922-44487352 + Intergenic
N/A UCSC
HMGB1P36 chr21:37812650-37813956 + Intergenic
N/A UCSC
HMGB1P39 chr22a:131137103-131138213 + Intragenic
N/A UCSC
HMGB1P40 chr22a:62148898-62150236 + Intergenic
N/A UCSC
HMGB1P41 chr22a:70911850-70914068 - Intragenic
N/A UCSC
HMGB1P42 chr22a:91534187-91535266 + Intergenic
N/A UCSC
HMGB1P43 chr23:6370465-6371522 - Intergenic
N/A UCSC
HMGB1P44 chrX:40733245-40733973 + Intergenic
N/A UCSC
HMGB1P45 chrX:85938032-85938640 + Intergenic
N/A UCSC
HMGB1P46 chrX:97882235-97884431 + Intergenic
N/A UCSC
HMGB1P13 chr6:44990129-44990875 - Intergenic
N/A UCSC
HMGB1P27 chr15:81405166-81405944 + Intergenic
N/A UCSC
HMGB1P28 chr16:26818794-26819070 + Intragenic
N/A UCSC
HMGB1P32 chr18:38712293-38712513 + Intergenic
N/A UCSC
HMGB1P5 chr2:133244826-133245228 + Intergenic
N/A UCSC
HMGB1P31 chr18:32016671-32017427 - Intragenic
N/A UCSC
HMGB1P12 chr6:107917523-107919113 - Intragenic
N/A UCSC
HMGB1P33 chr18:50016275-50016760 - Intragenic
N/A UCSC
HMGB1P37 chr21:69659537-69660024 - Intergenic
N/A UCSC
HMGB1P38 chr22a:118882978-118884513 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_003270234.4
GCCAATAGGAGCCGCGCTGGCTGGAGAGTAATGTTACAGAGCGGAGAGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGAGAGCCGGACGGGCACTGGGCGACTCTGTGCCTCGCTGAGGaaaaataactaaacatgGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGacCATGTCtgctaaagagaaaggaaaatttgaagATATGGCAAAGGCGGACAAGGCCCgttatgaaagagaaatgaaaacctatatcCCTCCCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCttcggCCTTCTTCCTGTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAAGGAGTTGTCAAGgctgaaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagTTGGTTCTAgcgcagtttttttttttcttgtctataaagcATTTAACCCCCCTGTACACAACTcactccttttaaagaaaaaaattgaaatgtaaggCTGtgtaagatttgtttttaaactgtaCAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTctgtaattgcaaaaaaaaaaaaaaagttgcagctGTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattgTTGTCCTTTTCATAGGtctgaaatttttcttcttgAGGGGAAGCTAGTCTTTtgcttttgcccattttgaatCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTGTCTACACACCCTGCATATCATAATGGGGGTAAAATTAAGTTGAGATAGTTTTCATCCATAACTGAACATCCAAAATCTTGATCAGTTAAGAAATTTCACATAGCCCACTTAACATTTACAAACTGAAGAGTAATCAATCTACTCAAAGCATAGGATTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACCTTTACATGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACATTAAAGAAGACCCGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCcatattaaattttttgttgacaTTAGTCTCAGTGAAGACTATGAAAATGCTGGCTATAGATGTCTTTTCCCATTTATCTAAATATGGACTGCTCAGGAAACGAGACTTTCCATtacaagtatttttaattaattgggccagcttttaaaacaaagatgccACATTCAAAATAGGGTATATTTTCCTATATTATGGTTTGCCCCTTTATAAATCCAAGTAGATAGGAGGAAAGAAGACACCTAAACTTTGCATCTCAGTATgaattattcaatttatttgaatgatttttctttacaaaacaaaCTCATTCATTAGTCATGTTTATCTGCTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTCGAGAATATCGTTTTCTTAAAGtgccagtattttaaaatagcGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCtttccatttgcatttgtttatgtAATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGttttaaa
>XM_003270239.4
GTCAGAACAGAAATACATCTCAGGGCCAAACCGATAGGAAACGAGGCTGCCTCGCGGTGGCACCGCCACCCCCCAGCCGGGTTCCGAGCACCGGAGCTGGCTGCTGCTCCCTCTTCGGAGCAAAGTTTTATGCAAAGAgggtgttttttaaaactttcggtgcacgaaaaataactaaacatgGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGacCATGTCtgctaaagagaaaggaaaatttgaagATATGGCAAAGGCGGACAAGGCCCgttatgaaagagaaatgaaaacctatatcCCTCCCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCttcggCCTTCTTCCTGTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAAGGAGTTGTCAAGgctgaaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagTTGGTTCTAgcgcagtttttttttttcttgtctataaagcATTTAACCCCCCTGTACACAACTcactccttttaaagaaaaaaattgaaatgtaaggCTGtgtaagatttgtttttaaactgtaCAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTctgtaattgcaaaaaaaaaaaaaaagttgcagctGTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattgTTGTCCTTTTCATAGGtctgaaatttttcttcttgAGGGGAAGCTAGTCTTTtgcttttgcccattttgaatCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTGTCTACACACCCTGCATATCATAATGGGGGTAAAATTAAGTTGAGATAGTTTTCATCCATAACTGAACATCCAAAATCTTGATCAGTTAAGAAATTTCACATAGCCCACTTAACATTTACAAACTGAAGAGTAATCAATCTACTCAAAGCATAGGATTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACCTTTACATGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACATTAAAGAAGACCCGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCcatattaaattttttgttgacaTTAGTCTCAGTGAAGACTATGAAAATGCTGGCTATAGATGTCTTTTCCCATTTATCTAAATATGGACTGCTCAGGAAACGAGACTTTCCATtacaagtatttttaattaattgggccagcttttaaaacaaagatgccACATTCAAAATAGGGTATATTTTCCTATATTATGGTTTGCCCCTTTATAAATCCAAGTAGATAGGAGGAAAGAAGACACCTAAACTTTGCATCTCAGTATgaattattcaatttatttgaatgatttttctttacaaaacaaaCTCATTCATTAGTCATGTTTATCTGCTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTCGAGAATATCGTTTTCTTAAAGtgccagtattttaaaatagcGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCtttccatttgcatttgtttatgtAATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGttttaaa
>XM_030818569.1
gtcccATAATTAGGAAGAGTCGACTCGCTTAGGCCCTTGTTTATTCCCTATCTAGTGCAAAGCCACGAATTGGCAGCATGTTTTCTGACCTTTGGTTTGGTTGGTTTAAAATGGTGTTCTAGATTTTAAAATCGTTTAAGTGACCAGTTAGATACTCATTCAGAGCAGACTCAGGCGGATAGATAGGGAATACTGTATGGGTATATCTTTGTGTCTAGACTTTTTGAGATCGCCCTGAAGGaccgtttttgttttgtttttgcttggcATAGCCCCTTCAAGGAATTTAATCTCTCGGCCATATTCTTGTCTGCTTTTACGGAGaaaaataactaaacatgGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGacCATGTCtgctaaagagaaaggaaaatttgaagATATGGCAAAGGCGGACAAGGCCCgttatgaaagagaaatgaaaacctatatcCCTCCCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCttcggCCTTCTTCCTGTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAAGGAGTTGTCAAGgctgaaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagTTGGTTCTAgcgcagtttttttttttcttgtctataaagcATTTAACCCCCCTGTACACAACTcactccttttaaagaaaaaaattgaaatgtaaggCTGtgtaagatttgtttttaaactgtaCAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTctgtaattgcaaaaaaaaaaaaaaagttgcagctGTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattgTTGTCCTTTTCATAGGtctgaaatttttcttcttgAGGGGAAGCTAGTCTTTtgcttttgcccattttgaatCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTGTCTACACACCCTGCATATCATAATGGGGGTAAAATTAAGTTGAGATAGTTTTCATCCATAACTGAACATCCAAAATCTTGATCAGTTAAGAAATTTCACATAGCCCACTTAACATTTACAAACTGAAGAGTAATCAATCTACTCAAAGCATAGGATTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACCTTTACATGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACATTAAAGAAGACCCGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCcatattaaattttttgttgacaTTAGTCTCAGTGAAGACTATGAAAATGCTGGCTATAGATGTCTTTTCCCATTTATCTAAATATGGACTGCTCAGGAAACGAGACTTTCCATtacaagtatttttaattaattgggccagcttttaaaacaaagatgccACATTCAAAATAGGGTATATTTTCCTATATTATGGTTTGCCCCTTTATAAATCCAAGTAGATAGGAGGAAAGAAGACACCTAAACTTTGCATCTCAGTATgaattattcaatttatttgaatgatttttctttacaaaacaaaCTCATTCATTAGTCATGTTTATCTGCTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTCGAGAATATCGTTTTCTTAAAGtgccagtattttaaaatagcGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCtttccatttgcatttgtttatgtAATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGttttaaa
>XM_030818570.1
GCCAATAGGAGCCGCGCTGGCTGGAGAGTAATGTTACAGAGCGGAGAGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGAGAGCCGGACGGGCACTGGGCGACTCTGTGCCTCGCTGAGGaaaaataactaaacatgGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGacCATGTCtgctaaagagaaaggaaaatttgaagATATGGCAAAGGCGGACAAGGCCCgttatgaaagagaaatgaaaacctatatcCCTCCCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCttcggCCTTCTTCCTGTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGTTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATTTTGGTATAACTAGAATCTTGATTTCTTTCATAAAGTTCTGCcatgttctatttctttccttaatgtttttttcttccctactGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAAGGAGTTGTCAAGgctgaaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagTTGGTTCTAgcgcagtttttttttttcttgtctataaagcATTTAACCCCCCTGTACACAACTcactccttttaaagaaaaaaattgaaatgtaaggCTGtgtaagatttgtttttaaactgtaCAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTctgtaattgcaaaaaaaaaaaaaaagttgcagctGTTTTGTTGACATTCTGAATGCTTCtaagtaaatacaattttttttattagtattgTTGTCCTTTTCATAGGtctgaaatttttcttcttgAGGGGAAGCTAGTCTTTtgcttttgcccattttgaatCACATGAATTATTACAGTGTTTATCCTTTCATATAGTTAGCTAATAAAAAGCTTTTGTCTACACACCCTGCATATCATAATGGGGGTAAAATTAAGTTGAGATAGTTTTCATCCATAACTGAACATCCAAAATCTTGATCAGTTAAGAAATTTCACATAGCCCACTTAACATTTACAAACTGAAGAGTAATCAATCTACTCAAAGCATAGGATTATTAGAATCAAACATTTTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTAACCTTTACATGAGGACTCTATTCTTTAACTCCCATTACCATGTAATGGCAGTTATATTTTGCAGTTCCCACATTAAAGAAGACCCGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCcatattaaattttttgttgacaTTAGTCTCAGTGAAGACTATGAAAATGCTGGCTATAGATGTCTTTTCCCATTTATCTAAATATGGACTGCTCAGGAAACGAGACTTTCCATtacaagtatttttaattaattgggccagcttttaaaacaaagatgccACATTCAAAATAGGGTATATTTTCCTATATTATGGTTTGCCCCTTTATAAATCCAAGTAGATAGGAGGAAAGAAGACACCTAAACTTTGCATCTCAGTATgaattattcaatttatttgaatgatttttctttacaaaacaaaCTCATTCATTAGTCATGTTTATCTGCTTAGCAGTTTAGGGAACAATTTGGCAATTTTGTGGTTTTCGAGAATATCGTTTTCTTAAAGtgccagtattttaaaatagcGTTCTTGTAATTTTACACGCTTTTGTGATGGAGTGCTGTTTTGTTATATAATTTTGACTTGGATTCtttccatttgcatttgtttatgtAATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGttttaaata