Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGN1
Plot displaying the genomic locations of a parental gene (in chr21) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name high mobility group nucleosome binding domain 1
Also known as HMG14
Coordinate chr21:39342315-39349088
Strand -
Gene summary The protein encoded by this gene binds nucleosomal DNA and is associated with transcriptionally active chromatin. Along with a similar protein, HMG17, the encoded protein may help maintain an open chromatin configuration around transcribable genes. [provided by RefSeq, Aug 2011]

Retrocopy(s) from HMGN1

Retroname Coord Strand Genomic Region ENSG
HMGN1P20 chr10:19489096-19490205 + Intragenic
ENSG00000239539 UCSC
HMGN1P42 chr11:11181314-11182415 - Intergenic
ENSG00000270897 UCSC
HMGN1P43 chr11:24701273-24702365 + Intragenic
ENSG00000255489 UCSC
HMGN1P41 chr11:3988353-3989486 - Intragenic
ENSG00000224555 UCSC
HMGN1P5 chr1:158266028-158266919 - Intergenic
ENSG00000230942 UCSC
HMGN1P4 chr1:182941305-182942440 - Intragenic
ENSG00000224040 UCSC
HMGN1P44 chr12:14192023-14193047 + Intergenic
ENSG00000227760 UCSC
HMGN1P45 chr12:49442278-49442645 - Intragenic
ENSG00000257464 UCSC
HMGN1P24 chr13:95808503-95809607 - Intragenic
ENSG00000226977 UCSC
HMGN1P46 chr14:100480914-100482078 + Intragenic
ENSG00000258500 UCSC
HMGN1P1 chr14:55394340-55395258 - Intergenic
ENSG00000259318 UCSC
HMGN1P3 chr14:68886981-68888122 - Intragenic
ENSG00000258967 UCSC
HMGN1P26 chr15:62361225-62362369 - Intergenic
ENSG00000259557 UCSC
HMGN1P47 chr15:88952562-88954277 + Intergenic
ENSG00000259350 UCSC
HMGN1P38 chr15:92711769-92712907 + Intergenic
ENSG00000253954 UCSC
HMGN1P48 chr17:43144920-43146299 + Intergenic
ENSG00000267681 UCSC
HMGN1P28 chr17:60851343-60852640 + Intragenic
ENSG00000254114 UCSC
HMGN1P49 chr18:23484961-23485198 + Intergenic
ENSG00000283084 UCSC
HMGN1P30 chr18:58017664-58019056 - Intergenic
ENSG00000235028 UCSC
HMGN1P31 chr18:60794492-60794915 - Intergenic
ENSG00000267513 UCSC
HMGN1P32 chr19:53767958-53768591 - Intergenic
ENSG00000237589 UCSC
HMGN1P2 chr21:31706605-31707181 + Intragenic
ENSG00000229046 UCSC
HMGN1P36 chr2:97827209-97828350 + Intragenic
ENSG00000235734 UCSC
HMGN1P10 chr3:136609463-136609961 + Intragenic
Intragenic
ENSG00000244101 UCSC
HMGN1P8 chr3:167693258-167694660 - Intragenic
ENSG00000241120 UCSC
HMGN1P7 chr3:93988107-93988955 - Intragenic
ENSG00000239614 UCSC
HMGN1P11 chr4:62510454-62511569 + Intergenic
ENSG00000248336 UCSC
HMGN1P13 chr5:111571322-111572239 - Intergenic
ENSG00000249619 UCSC
HMGN1P15 chr5:115288448-115289363 - Intragenic
ENSG00000250197 UCSC
HMGN1P16 chr5:148220545-148221437 - Intergenic
ENSG00000249503 UCSC
HMGN1P17 chr5:56381821-56382788 + Intergenic
ENSG00000250787 UCSC
HMGN1P12 chr5:71537262-71537845 - Intragenic
Intragenic
ENSG00000247911 UCSC
HMGN1P18 chr7:121050939-121052001 + Intragenic
ENSG00000234927 UCSC
HMGN1P19 chr7:46634767-46635748 + Intergenic
ENSG00000224519 UCSC
HMGN1P40 chr8:116727235-116728126 + Intragenic
N/A UCSC
HMGN1P50 chrX:132522276-132522466 - Intergenic
N/A UCSC
HMGN1P37 chrX:154816304-154817439 - Intergenic
ENSG00000229237 UCSC
HMGN1P35 chrX:69174083-69175220 + Intergenic
ENSG00000172186 UCSC

Expression

Transcript Sequences

>NM_004965.7
ATCCGGTTCTCCCACCGCCCCCGCTGTGGGTCTCAGCAGCTCGGGCGGCGGGAGGAGTGGCAGCGGCAAGGCAGCCCAGTTTCGCGAAGGCTGTCGGCGCGCCGCGGCCCGCAGGCACCCGGCACGCGCCTTCCCCGCAGGCACCCGGCACGCGCCTTCCCCGCCGCCACGATGCCCAAGAGGAAGGTCAGCTCCGCCGAAGGCGCCGCCAAGGAAGAGCCCAAGAGGAGATCGGCGCGGTTGTCAGCTAAACCTCCTGCAAAAGTGGAAGCGAAGCCGAAAAAGGCAGCAGCGAAGGATAAATCTTCAGACAAAAAAGTGCAAACAAAAGGGAAAAGGGGAGCAAAGGGAAAACAGGCCGAAGTGGCTAACCAAGAAACTAAAGAAGACTTACCTGCGGAAAACGGGGAAACGAAGACTGAGGAGAGTCCAGCCTCTGATGAAGCAGGAGAGAAAGAAGCCAAGTCTGATTAATAACCATATACCATGTCTTATCAGTGGTCCCTGTCTCCCTTCTTGTACAATCCAGAGGAATATTTTTATCAACTATTTTGTAAATGCAAGTTTTTTAGTAGCTCTAGAAACATTTTTAAGAAGGAGGGAATCCCACCTCATCCCATTTTTTAAGTGTAAATGCTTTTTTTTAAGAGGTGAAATCATTTGCTGGTTGTTTATTTTTTGGTACAACCAGAAAATAGTGTGGGATATTGAATTATGGGAGGCTCTGACTGTCTCGGGTGTCAGCTTAACATTCCACAGATGGGGGGTTAGTTTTTATATCCTATAATACAAAGCATATTAAATGGCAATATGGAGTCAGTCCTGCATTTAATGTCTTGAACATTTTAAATTACTTCTATTACCATGTTGTTTTTTAGTAGAATTGTTTCCTAAAGAAAACCACTCTTTGATCATGGCTCTCTCTGCCAGAATTGTGTGCACTCTGTAACATCTTTGTGGTAGTCCTGTTTTCCTAATAACTTTGTTACTGTGCTGTGAAAGATTACAGATTTGAACATGTAGTGTACGTGCTGTTGAGTTGTGAACTGGTGGGCCGTATGTAACAGCTGACCAACGTGAAGATACTGGTACTTGATAGCCTCTTAAGGAAAATTTGCTTCCAAATTTTAAGCTGGAAAGTCACTGGAATAACTTTAAAAAAGAATTACAATACATGGCTTTTTAGAATTTCGTTACGTATGTTAAGATTTGTGTACAAATTGAAATGTCTGTACTGATCCTCAACCAATAAAATCTCAGTTATGAAAATA