Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ATP5MC2
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ATP synthase membrane subunit c locus 2
Also known as ATP5A|ATP5G2
Coordinate chr12:53665166-53677546
Strand -
Gene summary This gene encodes a subunit of mitochondrial ATP synthase. Mitochondrial ATP synthase catalyzes ATP synthesis, utilizing an electrochemical gradient of protons across the inner membrane during oxidative phosphorylation. ATP synthase is composed of two linked multi-subunit complexes: the soluble catalytic core, F1, and the membrane-spanning component, Fo, comprising the proton channel. The catalytic portion of mitochondrial ATP synthase consists of 5 different subunits (alpha, beta, gamma, delta, and epsilon) assembled with a stoichiometry of 3 alpha, 3 beta, and single representatives of the gamma, delta, and epsilon subunits. The proton channel likely has nine subunits (a, b, c, d, e, f, g, F6 and 8). There are three separate genes which encode subunit c of the proton channel and they specify precursors with different import sequences but identical mature proteins. The protein encoded by this gene is one of three precursors of subunit c. This gene has multiple pseudogenes. [provided by RefSeq, Jan 2018]

Retrocopy(s) from ATP5MC2

Retroname Coord Strand Genomic Region ENSG
ATP5MC2P6 chr7:126981064-126981332 + Intragenic
ENSG00000230820 UCSC
ATP5MC2P5 chr3:130293327-130293910 + Intergenic
ENSG00000249253 UCSC
ATP5MC2P1 chr1:209267649-209268279 - Intergenic
ENSG00000225712 UCSC
ATP5MC2P2 chr14:49373924-49374534 + Intergenic
ENSG00000258401 UCSC
ATP5MC2P3 chr2:197263056-197263679 + Intragenic
ENSG00000230482 UCSC
ATP5MC2P4 chrX:42098602-42099231 - Intergenic
ENSG00000228847 UCSC

Expression

Transcript Sequences

>NM_001369754.1
GCAGTCCACGTTACGGATCGGCTTACTCCGCGGAGTTGGCCTCATTTCTGCAGTCGGCGCTCCCTGTAGTTTCTCCTCTCGAACGCCAGGTGGAGCAACCGGCCGGATACCGCCACAGCCCTGGCAGGCGGCGCTGTGATGCCTGAGCTGATCCTtttccctcttgttgcccaggctggagtacaatggcgcaatcttggctcaccgtagcctctgcctcctggattcaagcaattctcctgcctcagcctcctgagtagctgggattacagCTCTCCTGCCACAGCTCCTCACCCCCTGAAAATGTTCGCCTGCTCCAAGTTTGTCTCCACTCCCTCCTTGGTCAAGAGCACCTCACAGCTGCTGAGCCGTCCGCTATCTGCAGTGGTGCTGAAACGACCGGAGATACTGACAGATGAGAGCCTCAGCAGCTTGGCAGTCTCATGTCCCCTTACCTCACTTGTCTCTAGCCGCAGCTTCCAAACCAGCGCCATTTCAAGGGACATCGACACAGCAGCCAAGTTCATtggagctggggctgccacagttggggtggctggttctggggctgggattggaactgtgtttgggAGCCTCATCATTGGTTATGCCAGGAACCCTTCTCTGAAGCAACAGCTCTTCTCCTACGCCATTCTGGGCTTTGCCCTCTCGGAGGCCATGGGGCTCTTTTGTCTGATGGTAGCCTTTCTCATCCTCTTTGCCATGTGAAGGAGCCGTCTCCACCTCCCATAGTTCTCCCGCGTCTGGTTGGCCCCGTGTGTTCCTTTTCCTATACCTCCCCAGGCAGCCTGGGGAACGTGGTTGGCTCAGGGTTTGACAGAGAAAAGACAAATAAATACTGTATTAATAAGA
>NM_001369755.1
GCAGTCCACGTTACGGATCGGCTTACTCCGCGGAGTTGGCCTCATTTCTGCAGTCGGCGCTCCCTGTAGTTTCTCCTCTCGAACGCCAGCTCTCCTGCCACAGCTCCTCACCCCCTGAAAATGTTCGCCTGCTCCAAGTTTGTCTCCACTCCCTCCTTGGTCAAGAGCACCTCACAGCTGCTGAGCCGTCCGCTATCTGCAGTGGTGCTGAAACGACCGGAGATACTGACAGATGAGAGCCTCAGCAGCTTGGCAGTCTCATGTCCCCTTACCTCACTTGTCTCTAGCCGCAGCTTCCAAACCAGCGCCATTTCAAGGGACATCGACACAGCAGCCAAGTTCATtggagctggggctgccacagttggggtggctggttctggggctgggattggaactgtgtttgggAGCCTCATCATTGGTTATGCCAGGAACCCTTCTCTGAAGCAACAGCTCTTCTCCTACGCCATTCTGGGCTTTGCCCTCTCGGAGGCCATGGGGCTCTTTTGTCTGATGGTAGCCTTTCTCATCCTCTTTGCCATGTGAAGGAGCCGTCTCCACCTCCCATAGTTCTCCCGCGTCTGGTTGGCCCCGTGTGTTCCTTTTCCTATACCTCCCCAGGCAGCCTGGGGAACGTGGTTGGCTCAGGGTTTGACAGAGAAAAGACAAATAAATACTGTATTAATAAGA
>NM_005176.7
CCCCTCTCTGTCTTCTCTGCAGTGGGAGCAGCTCTCCTGCCACAGCTCCTCACCCCCTGAAAATGTTCGCCTGCTCCAAGTTTGTCTCCACTCCCTCCTTGGTCAAGAGCACCTCACAGCTGCTGAGCCGTCCGCTATCTGCAGTGGTGCTGAAACGACCGGAGATACTGACAGATGAGAGCCTCAGCAGCTTGGCAGTCTCATGTCCCCTTACCTCACTTGTCTCTAGCCGCAGCTTCCAAACCAGCGCCATTTCAAGGGACATCGACACAGCAGCCAAGTTCATtggagctggggctgccacagttggggtggctggttctggggctgggattggaactgtgtttgggAGCCTCATCATTGGTTATGCCAGGAACCCTTCTCTGAAGCAACAGCTCTTCTCCTACGCCATTCTGGGCTTTGCCCTCTCGGAGGCCATGGGGCTCTTTTGTCTGATGGTAGCCTTTCTCATCCTCTTTGCCATGTGAAGGAGCCGTCTCCACCTCCCATAGTTCTCCCGCGTCTGGTTGGCCCCGTGTGTTCCTTTTCCTATACCTCCCCAGGCAGCCTGGGGAACGTGGTTGGCTCAGGGTTTGACAGAGAAAAGACAAATAAATACTGTATTAATAAGA