Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ATP5PF
Plot displaying the genomic locations of a parental gene (in chr21) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ATP synthase peripheral stalk subunit F6
Also known as ATP5|ATP5A|ATP5J|ATPM|CF6|F6
Coordinate chr21:25724500-25735653
Strand -
Gene summary Mitochondrial ATP synthase catalyzes ATP synthesis, utilizing an electrochemical gradient of protons across the inner membrane during oxidative phosphorylation. It is composed of two linked multi-subunit complexes: the soluble catalytic core, F1, and the membrane-spanning component, Fo, which comprises the proton channel. The F1 complex consists of 5 different subunits (alpha, beta, gamma, delta, and epsilon) assembled in a ratio of 3 alpha, 3 beta, and a single representative of the other 3. The Fo complex has nine subunits (a, b, c, d, e, f, g, F6 and 8). This gene encodes the F6 subunit of the Fo complex. The F6 subunit is required for F1 and Fo interactions. Alternatively spliced transcript variants encoding different isoforms have been identified for this gene. This gene has 1 or more pseudogenes. [provided by RefSeq, Feb 2016]

Retrocopy(s) from ATP5PF

Retroname Coord Strand Genomic Region ENSG
ATP5PFP5 chr22:22988206-22988684 + Intergenic
ENSG00000237472 UCSC
ATP5PFP3 chr8:98633501-98634008 + Intragenic
Intragenic
ENSG00000254112 UCSC
ATP5PFP4 chr9:105158706-105158891 + Intergenic
N/A UCSC
ATP5PFP2 chr5:73803151-73803600 - Intragenic
ENSG00000184084 UCSC
ATP5PFP1 chrY:6901132-6901467 + Intragenic
ENSG00000237701 UCSC

Expression

Transcript Sequences

>NM_001003703.2
AGAGCGGAGGTGGTGGCGGCGGAGGCTTTGGCAGCTCGGGACTGAGTGCAAGAATCAGCATGATTCTTCAGAGGCTCTTCAGGTTCTCCTCTGTCATTCGGTCAGCCGTCTCAGTCCATTTGCGGAGGAACATTGGTGTTACAGCAGTGGCATTTAATAAGGAACTTGATCCTATACAGAAACTCTTTGTGGACAAGATTAGAGAATACAAATCTAAGCGACAGACATCTGGAGGACCTGTTGATGCTAGTTCAGAGTATCAGCAAGAGCTGGAGAGGGAGCTTTTTAAGCTCAAGCAAATGTTTGGTAATGCAGACATGAATACATTTCCCACCTTCAAATTTGAAGATCCCAAATTTGAAGTCATCGAAAAACCCCAGGCCTGAAGAAATAAAGTAAAATTAATCTGGTAATTTGTCACGGATTAGTTGTACAACTAGTTAGAAGTTTCAGAATAAACATGCATTTCATAACTGTCAAATGTTCTTTTAATTCTGAGTCCAAATAAATTATTTGGTGATGTTGA
>NM_001320267.2
AGAGCGGAGGTGGTGGCGGCGGAGGCTTTGGCAGCTCGGGACTGAGTGCAAGGTGACTGGGAGGGTAGCTAGATCAGCGTGGCCTTTTGGGACTCCAGTTCTGGGTTTTTTCACGAGGCCTGGGCTGCCTCTCACCTTTACTAGGAGGAGAGAGCAGCTCTGTGTCCTGGGGACCTTCACGGCCTGGCCCGGGGTCACAGCTGACCTCTACGTTTGTAGACCTTGGAGTTTGCCGTAGACCCAGAAATAAGATCGATACCCTCTCTGAGGGCAAATCGGGGCGGCGCGGGGGGCAGGGAGGCCCGGGGGTCTCGGGCCCGCAGCCTGGCTGGGGCAACCCAAGGTCAGGCGCGCGGGAGAGATTTTCGGCCAGGCCTACCCGCCCCGGGCGCACGGGAGCGTCTAGGCTACTTAGGCAGAACGTGTACCATTAAGAGGGAAAAAATTAGTCATAATATTGAAAGTTTGCATCCCACCTAAAAACGATGGTGCTAACACTTCATTAGGCGACTTTATGGATTGTTCATAGGAATATGCACTGAAGAGGCAGCGAACCTACTAACCTTTGGCCGAATCAGCATGATTCTTCAGAGGCTCTTCAGGTTCTCCTCTGTCATTCGGTCAGCCGTCTCAGTCCATTTGCGGAGGAACATTGGTGTTACAGCAGTGGCATTTAATAAGGAACTTGATCCTATACAGAAACTCTTTGTGGACAAGATTAGAGAATACAAATCTAAGCGACAGACATCTGGAGGACCTGTTGATGCTAGTTCAGAGTATCAGCAAGAGCTGGAGAGGGAGCTTTTTAAGCTCAAGCAAATGTTTGGTAATGCAGACATGAATACATTTCCCACCTTCAAATTTGAAGATCCCAAATTTGAAGTCATCGAAAAACCCCAGGCCTGAAGAAATAAAGTAAAATTAATCTGGTAATTTGTCACGGATTAGTTGTACAACTAGTTAGAAGTTTCAGAATAAACATGCATTTCATAACTGTCAAATGTTCTTTTAATTCTGAGTCCAAATAAATTATTTGGTGATGTTGA