Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SALL4
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name spalt like transcription factor 4
Also known as DRRS|HSAL4|IVIC|ZNF797
Coordinate chr20:51782331-51802521
Strand -
Gene summary This gene encodes a zinc finger transcription factor thought to play a role in the development of abducens motor neurons. Defects in this gene are a cause of Duane-radial ray syndrome (DRRS). Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2015]

Retrocopy(s) from SALL4

Retroname Coord Strand Genomic Region ENSG
SALL4P5 chr3:22991071-22991641 + Intergenic
ENSG00000231915 UCSC
SALL4P8 chr13:111182229-111182423 - Intragenic
ENSG00000274614 UCSC
SALL4P9 chr14:22013009-22014958 + Intergenic
ENSG00000258705 UCSC
SALL4P7 chr14:60494555-60494714 - Intragenic
ENSG00000258692 UCSC
SALL4P10 chr16:20155316-20158626 + Intergenic
ENSG00000277211 UCSC
SALL4P6 chr3:42321027-42321479 + Intergenic
ENSG00000231280 UCSC
SALL4P2 chrX:129876998-129877627 + Intergenic
ENSG00000238040 UCSC

Expression

Transcript Sequences

>NM_001318031.2
AATTACTGGGACATGCGCGTTCCGGCCGAAGGGGGGTAAATTTCCCAACTCCAGGAATTTGTGGCGGAGAGGGCAAATAACTGCGGCTCTCCCGGCGCCCCGATGCTCGCACCATGTCGAGGCGCAAGCAGGCGAAACCCCAGCACATCAACTCGGAGGAGGACCAGGGCGagcagcagccgcagcagcagACCCCGGAGTTTGCAGATGCGGCCCCAGCGGCGCCCGCGGCGGGGGAGCTGGGTGCTCCAGTGAACCACCCAGGGAATGACGAGGTGGCGAGTGAGGATGAAGCCACAGTAAAGCGGCTTCGTCGGGAGGAGACGCACGTCTGTGAGAAATGCTGTGCGGAGTTCTTCAGCATCTCTGAGTTCCTGGAACATAAGAAAAATTGCACTAAAAATCCACCTGTCCTCATCATGAATGACAGCGAGGGGCCTGTGCCTTCAGAAGACTTCTCCGGAGCTGTACTGAGCCACCAGCCCACCAGTCCCGGCAGTAAGGACTGTCACAGGGAGAATGGCGGCAGCTCAGAGGACATGAAGGAGAAGCCGGATGCGGAGTCTGTGGTGTACCTAAAGACAGAGACAGCCCTGCCACCCACCCCCCAGGACATAAGCTATTTAGCCAAAGGCAAAGTGGCCAACACTAATGTGACCTTGCAGGCACTACGGGGCACCAAGGTGGCGGTGAATCAGCGGAGCGCGGATGCACTCCCTGCCCCCGTGCCTGGTGCCAACAGCATCCCGTGGGTCCTCGAGCAGATCTTGTGTCTgcagcagcagcagctacagcagATCCAGCTCACCGAGCAGATCCGCATCCAGGTGAACATGTGGGCCTCCCACGCCCTCCACTCAAGCGGGGCAGGGGCCGACACTCTGAAGACCTTGGGCAGCCACATGTCTCAGCAGGTTTCTGCAGCTGTGGCTTTGCTCAGCCAGAAAGCTGGAAGCCAAGGTCTGTCTCTGGATGCCTTGAAACAAGCCAAGCTACCTCACGCCAACATCCCTTCTGCCACCAGCTCCCTGTCCCCAGGGCTGGCACCCTTCACTCTGAAGCCGGATGGGACCCGGGTGCTCCCGAACGTCATGTCCCGCCTCCCGAGCGCTTTGCTTCCTCAGGCCCCGGGCTCGGTGCTCTTCCAGAGCCCTTTCTCCACTGTGGCGCTAGACACATCCAAGAAAGGGAAGGGGAAGCCACCGAACATCTCCGCGGTGGATGTCAAACCCAAAGACGAGGCGGCCCTCTACAAGCACAAGTGTCGGAGCAGTCTCCCTTCCACGTTTATCCGAGCCCCGCCGACCTATGTCAAGGTTGAAGTTCCTGGCACATTTGTGGGACCCTCGACATTGTCCCCAGGGATGACCCCTTTGTTAGCAGCCCAGCCACGCCGACAGGCCAAGCAACATGGCTGCACACGGTGTGGGAAGAACTTCTCGTCTGCTAGCGCTCTTCAGATCCACGAGCGGACTCACACTGGAGAGAAGCCTTTTGTGTGCAACATTTGTGGGCGAGCTTTTACCACCAAAGGCAACTTAAAGGTTCACTACATGACACACGGGGCGAACAATAACTCAGCCCGCCGTGGAAGGAAGTTGGCCATCGAGAACACCATGGCTCTGTTAGGTACGGACGGAAAAAGAGTCTCAGAAATCTTTCCCAAGGAAATCCTGGCCCCTTCAGTGAATGTGGACCCTGTTGTGTGGAACCAGTACACCAGCATGCTCAATGGCGGTCTGGCCGTGAAGACCAATGAGATCTCTGTGATCCAGAGTGGGGGGGTTCCTACCCTCCCGGTTTCCTTGGGGGCCACCTCCGTTGTGAATAACGCCACTGTCTCCAAGATGGATGGCTCCCAGTCGGGTATCAGTGCAGATGTGGAAAAACCAAGTGCTACTGACGGCGTTCCCAAACACCAGTTTCCTCACTTCCTGGAAGAAAACAAGATTGCGGTCAGCTAAGGGAGAACTTGCGTGGAAGGAGCAATGCAGACACAGTGAAATCTCTAGAATCTGCTTTGTTTTGTAAGAACTCATCTCCTCCTGTTTTCTTTTTCTTACTGATATGCAAATGATGTTTACTACGTTGGTTGTGACCACAACCTCAGGCAAGTGCTACAATCACGATTGTTGCTATGCTGCTTTGCAAAAAGTTGAAAAAATAAAAAAAAAATGCATACCAAAACAAATACAGACTCtttttttttgagatggagtctcgctctatcacccaggctggagtgcagtggcatgatctcggctcactgcaacctccccattctgggttcaagtgattctcctgccttagcctccagagtagctgggattacaggcaggtgccaccacgcccggctaattttgtattttgagtagagactgggtttcaccatgttggtcaggctggtctcgaactgctgacctcgtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagctaccacgcctggcACTTTTTTTTTTTTTTTCTAATTTTGGAAAGAAGCGGGTCTTGCAAAGTAGCTTTGTTACTTGTAACAGACGTATACATAGAACCTTTGTACAACCTAGAGTGACTTTTTCCAAAGACTGTTACCTATTTCAAGGTAGAATCGTTGGAACTTACTGAACAACAGTGGAAAAGACAACTACACAGCCTCATTGAGGGGAGATGGGTACTGTATACTTACTGGTAACTGGACACGGGTAAAAGGACAAGGTCTGTCATCTCTTTAGGGACCTGTTTTATATGCCCCAACCCTGTCCCCATCTTATTGTTTTTTTTTGAATGTACTTAAAAAAGGAACAACAAAAAACTAGGGTTGTAGAATTATAAAACTGCTTCAACCTTAGAACCTTAAGTAGGAGGCCCTCAAATGGACTTACGTTAGTCCTTAGGGAGTCAATGTGTGTGTTGCTGCTTATTTAAATACAGTTCAGTTGGAGCCCCGAGAGTGCCAATGTTTTCCCCACACCTCTTGGATGCCTTCCTCTTCCCAAATCCCAGAAGAGGTGGGCACCTGAGCGGGGAATCTCAGGTGACTTAGTTTGCCAGTGCCTACTCTATTGAAGAACTGGGTTTTCATGCTCGAGAAGAAACTCGTGGAAGGGCGTGTTTCCCATCACAGGTTCACATACTGATTGCTTTTGTTGAATTTCCTTGGTGCGACTTATGCCAAGTAATTATGACGATTTTTTGTTTTGTTTTGTTTCCTTGCTGAATATTTCATGAAGGCTACGAAGTTAGAACAGGCACGTCCTGGGTGTGAAAGCTTTAATTTATCTACCTCATTTATTTTTTATTTTTTGTAGCCATAGTGTCTATTTTCCTATTTTAAGACCGCTGAAGTATTCCCAGGCCCTGTCTAAAGCCTAAGAGTTGATGTATTGGTGGGAAGAGGTGAACGTTCAAGATGATTTTGTGATGCCTTTTTTTTTTGTAGTTTCCTTTGTAAATGTGATATTGAGCAAACGAAACATTGCTCTTGGTTTAACAAGAAAGAAAGAAAAAAACTCTAATTTCTGGGAGAAAAGTCTTTCCCCTCTATGTGGAAGGTCCTGACGGAAATATGCATCCAAGACGATTAGCCAAAGTGTTGTCTCTTCATCGTTGCACCTGACTTTAGGATTCCGCCCCCCttttttttttttttttttttttttGCCAAGTTGTGCCTTTCCTTCTGGAATTGTAAGTGAACACGATAATAGTACCTGTTTACACTGTGAAGTGGATATTGTTACAGAAAACACACCAGTGGCTTTCTCACTGTTGAGCTAATAATGCCTTGTGAATGTATGATCTACGGAGAAACCCCTGTAGTTGTACCTGCTGATGCTGTCTGTCTGTTGGAAAATAAAATTTGAATGTTTTTTTTTCTCA
>NM_020436.5
AATTACTGGGACATGCGCGTTCCGGCCGAAGGGGGGTAAATTTCCCAACTCCAGGAATTTGTGGCGGAGAGGGCAAATAACTGCGGCTCTCCCGGCGCCCCGATGCTCGCACCATGTCGAGGCGCAAGCAGGCGAAACCCCAGCACATCAACTCGGAGGAGGACCAGGGCGagcagcagccgcagcagcagACCCCGGAGTTTGCAGATGCGGCCCCAGCGGCGCCCGCGGCGGGGGAGCTGGGTGCTCCAGTGAACCACCCAGGGAATGACGAGGTGGCGAGTGAGGATGAAGCCACAGTAAAGCGGCTTCGTCGGGAGGAGACGCACGTCTGTGAGAAATGCTGTGCGGAGTTCTTCAGCATCTCTGAGTTCCTGGAACATAAGAAAAATTGCACTAAAAATCCACCTGTCCTCATCATGAATGACAGCGAGGGGCCTGTGCCTTCAGAAGACTTCTCCGGAGCTGTACTGAGCCACCAGCCCACCAGTCCCGGCAGTAAGGACTGTCACAGGGAGAATGGCGGCAGCTCAGAGGACATGAAGGAGAAGCCGGATGCGGAGTCTGTGGTGTACCTAAAGACAGAGACAGCCCTGCCACCCACCCCCCAGGACATAAGCTATTTAGCCAAAGGCAAAGTGGCCAACACTAATGTGACCTTGCAGGCACTACGGGGCACCAAGGTGGCGGTGAATCAGCGGAGCGCGGATGCACTCCCTGCCCCCGTGCCTGGTGCCAACAGCATCCCGTGGGTCCTCGAGCAGATCTTGTGTCTgcagcagcagcagctacagcagATCCAGCTCACCGAGCAGATCCGCATCCAGGTGAACATGTGGGCCTCCCACGCCCTCCACTCAAGCGGGGCAGGGGCCGACACTCTGAAGACCTTGGGCAGCCACATGTCTCAGCAGGTTTCTGCAGCTGTGGCTTTGCTCAGCCAGAAAGCTGGAAGCCAAGGTCTGTCTCTGGATGCCTTGAAACAAGCCAAGCTACCTCACGCCAACATCCCTTCTGCCACCAGCTCCCTGTCCCCAGGGCTGGCACCCTTCACTCTGAAGCCGGATGGGACCCGGGTGCTCCCGAACGTCATGTCCCGCCTCCCGAGCGCTTTGCTTCCTCAGGCCCCGGGCTCGGTGCTCTTCCAGAGCCCTTTCTCCACTGTGGCGCTAGACACATCCAAGAAAGGGAAGGGGAAGCCACCGAACATCTCCGCGGTGGATGTCAAACCCAAAGACGAGGCGGCCCTCTACAAGCACAAGTGTAAGTACTGTAGCAAGGTTTTTGGGACTGATAGCTCCTTGCAGATCCACCTCCGCTCCCACACTGGAGAGAGACCCTTCGTGTGCTCTGTCTGTGGTCATCGCTTCACCACCAAGGGCAACCTCAAGGTGCACTTTCACCGACATCCCCAGGTGAAGGCAAACCCCCAGCTGTTTGCCGAGTTCCAGGACAAAGTGGCGGCCGGCAATGGCATCCCCTATGCACTCTCTGTACCTGACCCCATAGATGAACCGAGTCTTTCTTTAGACAGCAAACCTGTCCTTGTAACCACCTCTGTAGGGCTACCTCAGAATCTTTCTTCGGGGACTAATCCCAAGGACCTCACGGGTGGCTCCTTGCCCGGTGACCTGCAGCCTGGGCCTTCTCCAGAAAGTGAGGGTGGACCCACACTCCCTGGGGTGGGACCAAACTATAATTCCCCAAGGGCTGGTGGCTTCCAAGGGAGTGGGACCCCTGAGCCAGGGTCAGAGACCCTGAAATTGCAGCAGTTGGTGGAGAACATTGACAAGGCCACCACTGATCCCAACGAATGTCTCATTTGCCACCGAGTCTTAAGCTGTCAGAGCTCCCTCAAGATGCATTATCGCACCCACACCGGGGAGAGACCGTTCCAGTGTAAGATCTGTGGCCGAGCCTTTTCTACCAAAGGTAACCTGAAGACACACCTTGGGGTTCACCGAACCAACACATCCATTAAGACGCAGCATTCGTGCCCCATCTGCCAGAAGAAGTTCACTAATGCCGTGATGCTGCAGCAACATATTCGGATGCACATGGGCGGTCAGATTCCCAACACGCCCCTGCCAGAGAATCCCTGTGACTTTACGGGTTCTGAGCCAATGACCGTGGGTGAGAACGGCAGCACCGGCGCTATCTGCCATGATGATGTCATCGAAAGCATCGATGTAGAGGAAGTCAGCTCCCAGGAGGCTCCCAGCAGCTCCTCCAAGGTCCCCACGCCTCTTCCCAGCATCCACTCGGCATCACCCACGCTAGGGTTTGCCATGATGGCTTCCTTAGATGCCCCAGGGAAAGTGGGTCCTGCCCCTTTTAACCTGCAGCGCCAGGGCAGCAGAGAAAACGGTTCCGTGGAGAGCGATGGCTTGACCAACGACTCATCCTCGCTGATGGGAGACCAGGAGTATCAGAGCCGAAGCCCAGATATCCTGGAAACCACATCCTTCCAGGCACTCTCCCCGGCCAATAGTCAAGCCGAAAGCATCAAGTCAAAGTCTCCCGATGCTGGGAGCAAAGCAGAGAGCTCCGAGAACAGCCGCACTGAGATGGAAGGTCGGAGCAGTCTCCCTTCCACGTTTATCCGAGCCCCGCCGACCTATGTCAAGGTTGAAGTTCCTGGCACATTTGTGGGACCCTCGACATTGTCCCCAGGGATGACCCCTTTGTTAGCAGCCCAGCCACGCCGACAGGCCAAGCAACATGGCTGCACACGGTGTGGGAAGAACTTCTCGTCTGCTAGCGCTCTTCAGATCCACGAGCGGACTCACACTGGAGAGAAGCCTTTTGTGTGCAACATTTGTGGGCGAGCTTTTACCACCAAAGGCAACTTAAAGGTTCACTACATGACACACGGGGCGAACAATAACTCAGCCCGCCGTGGAAGGAAGTTGGCCATCGAGAACACCATGGCTCTGTTAGGTACGGACGGAAAAAGAGTCTCAGAAATCTTTCCCAAGGAAATCCTGGCCCCTTCAGTGAATGTGGACCCTGTTGTGTGGAACCAGTACACCAGCATGCTCAATGGCGGTCTGGCCGTGAAGACCAATGAGATCTCTGTGATCCAGAGTGGGGGGGTTCCTACCCTCCCGGTTTCCTTGGGGGCCACCTCCGTTGTGAATAACGCCACTGTCTCCAAGATGGATGGCTCCCAGTCGGGTATCAGTGCAGATGTGGAAAAACCAAGTGCTACTGACGGCGTTCCCAAACACCAGTTTCCTCACTTCCTGGAAGAAAACAAGATTGCGGTCAGCTAAGGGAGAACTTGCGTGGAAGGAGCAATGCAGACACAGTGAAATCTCTAGAATCTGCTTTGTTTTGTAAGAACTCATCTCCTCCTGTTTTCTTTTTCTTACTGATATGCAAATGATGTTTACTACGTTGGTTGTGACCACAACCTCAGGCAAGTGCTACAATCACGATTGTTGCTATGCTGCTTTGCAAAAAGTTGAAAAAATAAAAAAAAAATGCATACCAAAACAAATACAGACTCtttttttttgagatggagtctcgctctatcacccaggctggagtgcagtggcatgatctcggctcactgcaacctccccattctgggttcaagtgattctcctgccttagcctccagagtagctgggattacaggcaggtgccaccacgcccggctaattttgtattttgagtagagactgggtttcaccatgttggtcaggctggtctcgaactgctgacctcgtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagctaccacgcctggcACTTTTTTTTTTTTTTTCTAATTTTGGAAAGAAGCGGGTCTTGCAAAGTAGCTTTGTTACTTGTAACAGACGTATACATAGAACCTTTGTACAACCTAGAGTGACTTTTTCCAAAGACTGTTACCTATTTCAAGGTAGAATCGTTGGAACTTACTGAACAACAGTGGAAAAGACAACTACACAGCCTCATTGAGGGGAGATGGGTACTGTATACTTACTGGTAACTGGACACGGGTAAAAGGACAAGGTCTGTCATCTCTTTAGGGACCTGTTTTATATGCCCCAACCCTGTCCCCATCTTATTGTTTTTTTTTGAATGTACTTAAAAAAGGAACAACAAAAAACTAGGGTTGTAGAATTATAAAACTGCTTCAACCTTAGAACCTTAAGTAGGAGGCCCTCAAATGGACTTACGTTAGTCCTTAGGGAGTCAATGTGTGTGTTGCTGCTTATTTAAATACAGTTCAGTTGGAGCCCCGAGAGTGCCAATGTTTTCCCCACACCTCTTGGATGCCTTCCTCTTCCCAAATCCCAGAAGAGGTGGGCACCTGAGCGGGGAATCTCAGGTGACTTAGTTTGCCAGTGCCTACTCTATTGAAGAACTGGGTTTTCATGCTCGAGAAGAAACTCGTGGAAGGGCGTGTTTCCCATCACAGGTTCACATACTGATTGCTTTTGTTGAATTTCCTTGGTGCGACTTATGCCAAGTAATTATGACGATTTTTTGTTTTGTTTTGTTTCCTTGCTGAATATTTCATGAAGGCTACGAAGTTAGAACAGGCACGTCCTGGGTGTGAAAGCTTTAATTTATCTACCTCATTTATTTTTTATTTTTTGTAGCCATAGTGTCTATTTTCCTATTTTAAGACCGCTGAAGTATTCCCAGGCCCTGTCTAAAGCCTAAGAGTTGATGTATTGGTGGGAAGAGGTGAACGTTCAAGATGATTTTGTGATGCCTTTTTTTTTTGTAGTTTCCTTTGTAAATGTGATATTGAGCAAACGAAACATTGCTCTTGGTTTAACAAGAAAGAAAGAAAAAAACTCTAATTTCTGGGAGAAAAGTCTTTCCCCTCTATGTGGAAGGTCCTGACGGAAATATGCATCCAAGACGATTAGCCAAAGTGTTGTCTCTTCATCGTTGCACCTGACTTTAGGATTCCGCCCCCCttttttttttttttttttttttttGCCAAGTTGTGCCTTTCCTTCTGGAATTGTAAGTGAACACGATAATAGTACCTGTTTACACTGTGAAGTGGATATTGTTACAGAAAACACACCAGTGGCTTTCTCACTGTTGAGCTAATAATGCCTTGTGAATGTATGATCTACGGAGAAACCCCTGTAGTTGTACCTGCTGATGCTGTCTGTCTGTTGGAAAATAAAATTTGAATGTTTTTTTTTCTCA