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Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL18A
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L18a
Also known as L18A
Coordinate chr19:17859910-17863319
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a member of the L18AE family of ribosomal proteins that is a component of the 60S subunit. The encoded protein may play a role in viral replication by interacting with the hepatitis C virus internal ribosome entry site (IRES). This gene is co-transcribed with the U68 snoRNA, located within the third intron. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed throughout the genome. [provided by RefSeq, Jul 2012]

Retrocopy(s) from RPL18A

Retroname Coord Strand Genomic Region ENSG
RPL18AP3 chr12:104265268-104265892 + Intragenic
ENSG00000213442 UCSC
RPL18AP18 chr1:27176710-27177330 + Intergenic
ENSG00000229985 UCSC
RPL18AP19 chr1:32979906-32980525 + Intergenic
ENSG00000217644 UCSC
RPL18AP24 chr14:93223548-93224175 - Intragenic
ENSG00000240096 UCSC
RPL18AP25 chr17:37162615-37163152 + Intragenic
ENSG00000276810 UCSC
RPL18AP26 chr17:48881138-48881333 + Intergenic
ENSG00000248895 UCSC
RPL18AP27 chr19:11521930-11522550 + Intragenic
ENSG00000213304 UCSC
RPL18AP20 chr2:47690666-47691283 - Intergenic
ENSG00000230979 UCSC
RPL18AP7 chr3:38526749-38527362 - Intergenic
ENSG00000232439 UCSC
RPL18AP21 chr3:43484918-43485124 - Intragenic
ENSG00000223916 UCSC
RPL18AP8 chr3:96619306-96619874 + Intergenic
ENSG00000218754 UCSC
RPL18AP22 chr7:43274128-43274464 + Intragenic
ENSG00000213717 UCSC
RPL18AP23 chr9:8713275-8713894 + Intragenic
ENSG00000212695 UCSC
RPL18AP14 chrX:104803914-104804257 + Intragenic
ENSG00000223733 UCSC
RPL18AP15 chrX:111624174-111624773 - Intergenic
ENSG00000236189 UCSC
RPL18AP16 chrX:153662126-153662741 + Intergenic
ENSG00000237793 UCSC

Expression

Transcript Sequences

>NM_000980.4
AGAGGACACTTCCTTTTGCGGGTGGCGGCGAACGCGGAGAGCACGCCATGAAGGCCTCGGGCACGCTACGAGAGTACAAGGTAGTGGGTCGCTGCCTGCCCACCCCCAAATGCCACACGCCGCCCCTCTACCGCATGCGAATCTTTGCGCCTAATCATGTCGTCGCCAAGTCCCGCTTCTGGTACTTTGTATCTCAGTTAAAGAAGATGAAGAAGTCTTCAGGGGAGATTGTCTACTGTGGGCAGGTGTTTGAGAAGTCCCCCCTGCGGGTGAAGAACTTCGGGATCTGGCTGCGCTATGACTCCCGGAGCGGCACCCACAACATGTACCGGGAATACCGGGACCTGACCACCGCAGGCGCTGTCACCCAGTGCTACCGAGACATGGGTGCCCGGCACCGCGCCCGAGCCCACTCCATTCAGATCATGAAGGTGGAGGAGATCGCGGCCAGCAAGTGCCGCCGGCCGGCTGTCAAGCAGTTCCACGACTCCAAGATCAAGTTCCCGCTGCCCCACCGGGTCCTGCGCCGTCAGCACAAGCCACGCTTCACCACCAAGAGGCCCAACACCTTCTTCTAGGTGCAGGGCCCTCGTCCGGGTGTGCCCCAAATAAACTCAGGAACGCCCCGGTGCTC