Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL34
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L34
Also known as L34
Coordinate chr4:108620576-108630484
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L34E family of ribosomal proteins. It is located in the cytoplasm. This gene originally was thought to be located at 17q21, but it has been mapped to 4q. Overexpression of this gene has been observed in some cancer cells. Alternative splicing results in multiple transcript variants, all encoding the same isoform. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Feb 2016]

Retrocopy(s) from RPL34

Retroname Coord Strand Genomic Region ENSG
RPL34P51 chr10:133190630-133190866 + Intragenic
N/A UCSC
RPL34P54 chr11:111946684-111946903 - Intragenic
ENSG00000255286 UCSC
RPL34P23 chr11:123035835-123036233 + Intergenic
ENSG00000243669 UCSC
RPL34P52 chr11:17137938-17138270 - Intragenic
ENSG00000240808 UCSC
RPL34P38 chr1:21073581-21073805 - Intragenic
ENSG00000236073 UCSC
RPL34P39 chr1:26326652-26327042 + Intragenic
ENSG00000225854 UCSC
RPL34P27 chr13:24988532-24988956 - Intergenic
ENSG00000232858 UCSC
RPL34P31 chr17:27274179-27274518 + Intergenic
ENSG00000239223 UCSC
RPL34P58 chr17:42714266-42714681 + Intragenic
ENSG00000239671 UCSC
RPL34P8 chr2:111674973-111675322 + Intergenic
ENSG00000237583 UCSC
RPL34P60 chr22:19238449-19238723 - Intragenic
ENSG00000230194 UCSC
RPL34P42 chr3:28447702-28448115 + Intragenic
ENSG00000230480 UCSC
RPL34P17 chr8:52313151-52313511 - Intragenic
ENSG00000240534 UCSC
RPL34P50 chr9:129883949-129884203 - Intergenic
ENSG00000224988 UCSC
RPL34P21 chr11:130082487-130082719 - Intragenic
ENSG00000244451 UCSC
RPL34P29 chr16:49935037-49935340 + Intergenic
ENSG00000244551 UCSC
RPL34P37 chr1:6547982-6548652 + Intragenic
ENSG00000229519 UCSC
RPL34P36 chrX:87806490-87806726 - Intergenic
ENSG00000270446 UCSC
RPL34P53 chr11:32758258-32758645 + Intragenic
ENSG00000244535 UCSC
RPL34P40 chr1:153995597-153995989 + Intragenic
ENSG00000231416 UCSC
RPL34P1 chr1:168210603-168210980 + Intergenic
ENSG00000237049 UCSC
RPL34P6 chr1:200863773-200864200 + Intergenic
ENSG00000231333 UCSC
RPL34P55 chr12:19508870-19509291 + Intragenic
ENSG00000240328 UCSC
RPL34P41 chr1:226188830-226189255 - Intergenic
ENSG00000223570 UCSC
RPL34P56 chr13:21216521-21216652 + Intergenic
ENSG00000271250 UCSC
RPL34P26 chr13:50361377-50361797 - Intergenic
ENSG00000223676 UCSC
RPL34P57 chr14:55282294-55282673 - Intragenic
ENSG00000239686 UCSC
RPL34P59 chr18:21854643-21854998 - Intragenic
ENSG00000243303 UCSC
RPL34P34 chr19:22368571-22368985 - Intergenic
ENSG00000236312 UCSC
RPL34P3 chr21:35472063-35472469 - Intergenic
ENSG00000223671 UCSC
RPL34P43 chr3:120512816-120513221 + Intergenic
ENSG00000244441 UCSC
RPL34P44 chr4:122815821-122816149 - Intergenic
ENSG00000244083 UCSC
RPL34P46 chr5:134804775-134805143 - Intragenic
ENSG00000241179 UCSC
RPL34P49 chr6:162957259-162957596 - Intragenic
ENSG00000217557 UCSC
RPL34P47 chr6:5788309-5788730 - Intergenic
ENSG00000217239 UCSC
RPL34P18 chr8:93957304-93957717 - Intergenic
ENSG00000240509 UCSC
RPL34P20 chr10:97393173-97393502 - Intragenic
ENSG00000231508 UCSC
RPL34P45 chr4:156972773-156972999 + Intergenic
ENSG00000250622 UCSC
RPL34P48 chr6:43328024-43328458 + Intergenic
ENSG00000220614 UCSC

Expression

Transcript Sequences

>NM_000995.5
CCTCTTCCGGGGACGTTGTCTGCAGGCACTCAGAATGGTCCAGCGTTTGACATACCGACGTAGGCTTTCCTACAATACAGCCTCTAACAAAACTAGGCTGTCCCGAACCCCTGGTAATAGAATTGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCAAAATCTGCATGTGGTGTGTGCCCAGGCAGACTTCGAGGGGTTCGTGCTGTAAGACCTAAAGTTCTTATGAGATTGTCCAAAACAAAGAAACATGTCAGCAGGGCCTATGGTGGTTCCATGTGTGCTAAATGTGTTCGTGACAGGATCAAGCGTGCTTTCCTTATCGAGGAGCAGAAAATCGTTGTGAAAGTGTTGAAGGCACAAGCACAGAGTCAGAAAGCTAAATAAAAAAATGAAACTTTTTTGAGTAATAAAAATGAAAAGACGCTGTCCAATAGAAAAAGTtggtgtgctggagctacctcacctcagcttgagagagccagttgtgtgcatctctttccagttttgcatccagtgacgtctgcttggcatcttgagattgttatggtgagagtatttacacctcagcaaatgctgcaaaatcctgttttcccccagagagctggaggttaaatactaccagcacatccctAGATACTACTCAAGTTACAGTATATGATCACTAATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGTACATGTTTGATAATGACTTGATTGTTATTATAAGTACTTATTAATACTTCGATTCTGTAAAGAGTTTAGGGTTTGATTTTATAAAATCCAAAATGAGCCTTTTATTGAATCCAGTTCTCTATGTGACCAGTTCTCTGTATGAATGGAAGGGAAAAGAATTAAAAATCTTGCAAAGGGGAAA
>NM_001319234.1
TTTATTTCCTTACCAATCGGCTGCCATCCGAGGAGCTGAGGAAGCCTAGAGCTCTCAGAAGCAGTCCTTTGAGCTGGTGTAGGGGTAAGGGGCACAACAGGGAGGTTGGTGGTGAGGAAGTTCCTTACTTTGATCTTTGGAAATCCCTTGTTCCTGGTGGCACCTCCAAAGCCGCACTCAGAATGGTCCAGCGTTTGACATACCGACGTAGGCTTTCCTACAATACAGCCTCTAACAAAACTAGGCTGTCCCGAACCCCTGGTAATAGAATTGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCAAAATCTGCATGTGGTGTGTGCCCAGGCAGACTTCGAGGGGTTCGTGCTGTAAGACCTAAAGTTCTTATGAGATTGTCCAAAACAAAGAAACATGTCAGCAGGGCCTATGGTGGTTCCATGTGTGCTAAATGTGTTCGTGACAGGATCAAGCGTGCTTTCCTTATCGAGGAGCAGAAAATCGTTGTGAAAGTGTTGAAGGCACAAGCACAGAGTCAGAAAGCTAAATAAAAAAATGAAACTTTTTTGAGTAATAAAAATGAAAAGACGCTGTATGTATGACTTTTTTTTTTTCTGTTGTAATGTGTTAGTATACAGATTTTGTTTCTGTATGGTATTTGGGGACCCTATAGTTTTTAGCAGATTACTTTTTCTTGTTTTGTTTGTTG
>NM_001319235.2
CCTCTTCCGGGGACGTTGTCTGCAGGTATGGATGTTGTTCTCTTTTCCCTGTCTTTATTTCCTTACCAATCGGCTGCCATCCGAGGAGCTGAGGAAGCCTAGAGCTCTCAGAAGCAGTCCTTTGAGCTGGTGTAGGGGCACTCAGAATGGTCCAGCGTTTGACATACCGACGTAGGCTTTCCTACAATACAGCCTCTAACAAAACTAGGCTGTCCCGAACCCCTGGTAATAGAATTGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCAAAATCTGCATGTGGTGTGTGCCCAGGCAGACTTCGAGGGGTTCGTGCTGTAAGACCTAAAGTTCTTATGAGATTGTCCAAAACAAAGAAACATGTCAGCAGGGCCTATGGTGGTTCCATGTGTGCTAAATGTGTTCGTGACAGGATCAAGCGTGCTTTCCTTATCGAGGAGCAGAAAATCGTTGTGAAAGTGTTGAAGGCACAAGCACAGAGTCAGAAAGCTAAATAAAAAAATGAAACTTTTTTGAGTAATAAAAATGAAAAGACGCTGTATGTATGACTTTTTTTTTTTCTGTTGTAATGTGTTAGTATACAGATTTTGTTTCTGTATGGTATTTGGGGACCCTATAGTTTTTAGCAGATTACTTTTTCTTGTTTTGTTTGTTG
>NM_001319236.2
CCTCTTCCGGGGACGTTGTCTGCAGGCACTCAGAATGGTCCAGCGTTTGACATACCGACGTAGGCTTTCCTACAATACAGCCTCTAACAAAACTAGGCTGTCCCGAACCCCTGGTAATAGAATTGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCAAAATCTGCATGTGGTGTGTGCCCAGGCAGACTTCGAGGGGTTCGTGCTGTAAGACCTAAAGTTCTTATGAGATTGTCCAAAACAAAGAAACATGTCAGCAGGGCCTATGGTGGTTCCATGTGTGCTAAATGTGTTCGTGACAGGATCAAGCGTGCTTTCCTTATCGAGGAGCAGAAAATCGTTGTGAAAGTGTTGAAGGCACAAGCACAGAGTCAGAAAGCTAAATAAAAAAATGAAACTTTTTTGAGTAATAAAAATGAAAAGACGCTGTATGTATGACTTTTTTTTTTTCTGTTGTAATGTGTTAGTATACAGATTTTGTTTCTGTATGGTATTTGGGGACCCTATAGTTTTTAGCAGATTACTTTTTCTTGTTTTGTTTGTTG
>NM_033625.4
CCTCTTCCGGGGACGTTGTCTGCAGGTATGGATGTTGTTCTCTTTTCCCTGTCTTTATTTCCTTACCAATCGGCTGCCATCCGAGGAGCTGAGGAAGCCTAGAGCTCTCAGAAGCAGTCCTTTGAGCTGGTGTAGGGGCACTCAGAATGGTCCAGCGTTTGACATACCGACGTAGGCTTTCCTACAATACAGCCTCTAACAAAACTAGGCTGTCCCGAACCCCTGGTAATAGAATTGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCAAAATCTGCATGTGGTGTGTGCCCAGGCAGACTTCGAGGGGTTCGTGCTGTAAGACCTAAAGTTCTTATGAGATTGTCCAAAACAAAGAAACATGTCAGCAGGGCCTATGGTGGTTCCATGTGTGCTAAATGTGTTCGTGACAGGATCAAGCGTGCTTTCCTTATCGAGGAGCAGAAAATCGTTGTGAAAGTGTTGAAGGCACAAGCACAGAGTCAGAAAGCTAAATAAAAAAATGAAACTTTTTTGAGTAATAAAAATGAAAAGACGCTGTCCAATAGAAAAAGTtggtgtgctggagctacctcacctcagcttgagagagccagttgtgtgcatctctttccagttttgcatccagtgacgtctgcttggcatcttgagattgttatggtgagagtatttacacctcagcaaatgctgcaaaatcctgttttcccccagagagctggaggttaaatactaccagcacatccctAGATACTACTCAAGTTACAGTATATGATCACTAATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGTACATGTTTGATAATGACTTGATTGTTATTATAAGTACTTATTAATACTTCGATTCTGTAAAGAGTTTAGGGTTTGATTTTATAAAATCCAAAATGAGCCTTTTATTGAATCCAGTTCTCTATGTGACCAGTTCTCTGTATGAATGGAAGGGAAAAGAATTAAAAATCTTGCAAAGGGGAAA