Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL36A
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L36a
Also known as L36A|L44L|MIG6|RPL44
Coordinate chrX:101391011-101396155
Strand +
Gene summary Cytoplasmic ribosomes, organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein, which shares sequence similarity with yeast ribosomal protein L44, belongs to the L44E (L36AE) family of ribosomal proteins. Although this gene has been referred to as ribosomal protein L44 (RPL44), its official name is ribosomal protein L36a (RPL36A). This gene and the human gene officially named ribosomal protein L36a-like (RPL36AL) encode nearly identical proteins; however, they are distinct genes. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Naturally occurring read-through transcription occurs between this locus and the heterogeneous nuclear ribonucleoprotein H2 (H') gene. [provided by RefSeq, Jan 2011]

Retrocopy(s) from RPL36A

Retroname Coord Strand Genomic Region ENSG
RPL36AP36 chr10:13159423-13159777 - Intergenic
ENSG00000237540 UCSC
RPL36AP55 chr10:27905017-27905222 + Intragenic
ENSG00000226016 UCSC
RPL36AP58 chr1:100651959-100652317 + Intergenic
ENSG00000224685 UCSC
RPL36AP75 chr11:16974645-16975044 - Intragenic
ENSG00000244398 UCSC
RPL36AP39 chr11:1792524-1792925 + Intergenic
ENSG00000230980 UCSC
RPL36AP40 chr11:25588474-25588765 - Intergenic
ENSG00000240298 UCSC
RPL36AP76 chr11:74738435-74738797 - Intergenic
ENSG00000241097 UCSC
RPL36AP41 chr12:63871738-63871995 - Intragenic
ENSG00000242087 UCSC
RPL36AP56 chr1:41264419-41264709 - Intergenic
ENSG00000213987 UCSC
RPL36AP77 chr14:49618783-49619104 - Intergenic
N/A UCSC
RPL36AP78 chr14:56683376-56683761 - Intergenic
ENSG00000242995 UCSC
RPL36AP79 chr14:65268856-65269034 + Intergenic
ENSG00000214759 UCSC
RPL36AP80 chr14:93244003-93244335 + Intragenic
ENSG00000241499 UCSC
RPL36AP81 chr15:34943058-34943444 + Intragenic
ENSG00000231409 UCSC
RPL36AP82 chr15:51351044-51351190 - Intragenic
ENSG00000270378 UCSC
RPL36AP83 chr15:60390457-60390731 + Intragenic
ENSG00000240163 UCSC
RPL36AP43 chr15:89687876-89688219 - Intragenic
ENSG00000241362 UCSC
RPL36AP84 chr16:71421357-71421578 + Intergenic
ENSG00000262120 UCSC
RPL36AP85 chr17:58675287-58675526 + Intragenic
ENSG00000266561 UCSC
RPL36AP86 chr17:60727164-60727482 - Intragenic
ENSG00000224011 UCSC
RPL36AP87 chr17:62319908-62320139 + Intergenic
ENSG00000242123 UCSC
RPL36AP48 chr17:67224710-67225086 + Intragenic
ENSG00000213180 UCSC
RPL36AP88 chr17:75338810-75339197 + Intragenic
ENSG00000228007 UCSC
RPL36AP89 chr18:13919572-13919956 - Intergenic
ENSG00000243779 UCSC
RPL36AP10 chr1:88577893-88578213 + Intergenic
ENSG00000237959 UCSC
RPL36AP90 chr19:2030854-2031025 - Intergenic
ENSG00000267180 UCSC
RPL36AP51 chr19:21233343-21233698 + Intergenic
ENSG00000242291 UCSC
RPL36AP57 chr1:93190689-93191078 - Intragenic
ENSG00000237003 UCSC
RPL36AP92 chr19:54973784-54974074 + Intragenic
Intragenic
ENSG00000243494 UCSC
RPL36AP13 chr2:24334482-24334781 + Intragenic
ENSG00000233747 UCSC
RPL36AP16 chr2:69594685-69595076 - Intragenic
ENSG00000232228 UCSC
RPL36AP59 chr3:35871899-35872213 + Intergenic
ENSG00000226489 UCSC
RPL36AP61 chr4:111551868-111552171 + Intergenic
ENSG00000241722 UCSC
RPL36AP62 chr4:112171182-112171578 + Intragenic
ENSG00000243280 UCSC
RPL36AP60 chr4:76401277-76401619 + Intragenic
ENSG00000240426 UCSC
RPL36AP21 chr5:18049549-18049872 + Intergenic
ENSG00000240785 UCSC
RPL36AP66 chr6:108318162-108318450 + Intergenic
ENSG00000238055 UCSC
RPL36AP63 chr6:20722290-20722570 - Intragenic
ENSG00000225832 UCSC
RPL36AP64 chr6:34686897-34687222 + Intragenic
ENSG00000220643 UCSC
RPL36AP65 chr6:42499735-42500079 + Intergenic
ENSG00000237107 UCSC
RPL36AP68 chr7:149191045-149191256 - Intergenic
ENSG00000239719 UCSC
RPL36AP69 chr7:152602158-152602515 - Intergenic
ENSG00000225416 UCSC
RPL36AP26 chr7:15701384-15701781 - Intergenic
ENSG00000235828 UCSC
RPL36AP70 chr7:157262969-157263224 - Intragenic
ENSG00000224629 UCSC
RPL36AP29 chr7:16208973-16209273 + Intragenic
ENSG00000224683 UCSC
RPL36AP67 chr7:44510971-44511246 - Intergenic
ENSG00000225443 UCSC
RPL36AP71 chr8:28810118-28810467 + Intragenic
ENSG00000242958 UCSC
RPL36AP72 chr8:86016785-86017178 + Intergenic
ENSG00000227753 UCSC
RPL36AP73 chr8:95403800-95403946 + Intergenic
ENSG00000253945 UCSC
RPL36AP6 chr9:107834451-107834836 - Intergenic
ENSG00000231293 UCSC
RPL36AP74 chr9:27210376-27210716 + Intragenic
ENSG00000232867 UCSC
RPL36AP33 chr9:35507579-35507931 + Intragenic
ENSG00000235619 UCSC
RPL36AP53 chrX:114589651-114589985 + Intragenic
ENSG00000224664 UCSC
RPL36AP54 chrX:134522725-134522892 + Intergenic
ENSG00000226107 UCSC
RPL36AP52 chrX:141138955-141139224 + Intergenic
ENSG00000214925 UCSC

Expression

Transcript Sequences

>NM_021029.6
CTTTCTTTCCGCGCCGATAGCGCTCACGCAAGCATGGTTAACGTCCCTAAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCAACCCCATAAAGTGACACAGTACAAGAAGGGCAAGGATTCTCTGTACGCCCAGGGAAAGCGGCGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAAACTAAGCCGATTTTCCGGAAAAAGGCTAAAACTACAAAGAAGATTGTGCTAAGGCTTGAGTGCGTTGAGCCCAACTGCAGATCTAAGAGAATGCTGGCTATTAAAAGATGCAAGCATTTTGAACTGGGAGGAGATAAGAAGAGAAAGGGCCAAGTGATCCAGTTCTAAGTGTCATCTTTTATTATGAAGACAATAAAATCTTGAGTTTATGTTCACTTCATTTGTTTGCTGTTCATCTTTTGGGAGGGAATAAGCTAGAGCCATCAATACAATTCCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAAGCTGACTGGTTGAGTTCACATCATATGTTGCAATTTTCTAATTTGGCACTTCAATCACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATTGGTTATCATGTGAGTAGACACATTTCAGGCTAATAGGGAGAAGTCAGTAACACATTCATAGTGAATATGAGATGTCTTTGCTAAGAGTTAAGTGTCAGATCTTTGTTATAACAGTTAATTTAATAAAGAATTTTGGCATTGTTCTTCA