Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS17
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S17
Also known as DBA4|RPS17L|RPS17L1|RPS17L2|S17
Coordinate chr15:82536750-82540457
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of four RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S17E family of ribosomal proteins and is located in the cytoplasm. Mutations in this gene cause Diamond-Blackfan anemia 4. Alternative splicing of this gene results in multiple transcript variants. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Apr 2014]

Retrocopy(s) from RPS17

Retroname Coord Strand Genomic Region ENSG
RPS17P15 chr11:111105566-111105920 - Intergenic
ENSG00000239354 UCSC
RPS17P18 chr1:167162379-167162862 - Intergenic
ENSG00000213068 UCSC
RPS17P24 chr15:75023036-75023305 + Intergenic
ENSG00000260483 UCSC
RPS17P25 chr17:30830879-30831360 + Intergenic
ENSG00000242439 UCSC
RPS17P7 chr2:121310150-121310417 + Intergenic
ENSG00000232723 UCSC
RPS17P26 chr22:32039464-32039944 + Intergenic
ENSG00000232346 UCSC
RPS17P20 chr3:143855691-143856117 - Intergenic
ENSG00000235110 UCSC
RPS17P11 chr5:52282653-52282818 + Intergenic
ENSG00000244621 UCSC
RPS17P5 chr6:50857208-50857687 - Intergenic
ENSG00000060303 UCSC
RPS17P22 chr6:62548018-62548326 + Intergenic
ENSG00000217067 UCSC
RPS17P23 chr7:138298167-138298507 - Intergenic
ENSG00000213238 UCSC
RPS17P13 chr7:37116753-37117216 + Intragenic
ENSG00000224706 UCSC
RPS17P19 chr3:129998753-129998938 + Intergenic
ENSG00000248459 UCSC
RPS17P21 chr4:342769-342964 - Intragenic
ENSG00000250321 UCSC
RPS17P2 chr5:116716220-116716696 + Intergenic
ENSG00000197575 UCSC
RPS17P1 chr6:29489270-29489693 - Intergenic
ENSG00000213900 UCSC
RPS17P14 chr8:108379159-108379565 - Intergenic
ENSG00000243287 UCSC
RPS17P17 chrX:140470819-140471298 - Intergenic
ENSG00000225758 UCSC

Expression

Transcript Sequences

>NM_001021.6
GTTTCCTCTTTTACCAAGGACCCGCCAACATGGGCCGCGTTCGCACCAAAACCGTGAAGAAGGCGGCCCGGGTCATCATAGAAAAGTACTACACGCGCCTGGGCAACGACTTCCACACGAACAAGCGCGTGTGCGAGGAGATCGCCATTATCCCCAGCAAAAAGCTCCGCAACAAGATAGCAGGTTATGTCACGCATCTGATGAAGCGAATTCAGAGAGGCCCAGTAAGAGGTATCTCCATCAAGCTGCAGGAGGAGGAGAGAGAAAGGAGAGACAATTATGTTCCTGAGGTCTCAGCCTTGGATCAGGAGATTATTGAAGTAGATCCTGACACTAAGGAAATGCTGAAGCTTTTGGACTTCGGCAGTCTGTCCAACCTTCAGGTCACTCAGCCTACAGTTGGGATGAATTTCAAAACGCCTCGGGGACCTGTTTGAATTTTTTCTGTAGTGCTGTATTATTTTCAATAAATCTGGGACAACAGCCTT
>NM_001021.6_2
GTTTCCTCTTTTACCAAGGACCCGCCAACATGGGCCGCGTTCGCACCAAAACCGTGAAGAAGGCGGCCCGGGTCATCATAGAAAAGTACTACACGCGCCTGGGCAACGACTTCCACACGAACAAGCGCGTGTGCGAGGAGATCGCCATTATCCCCAGCAAAAAGCTCCGCAACAAGATAGCAGGTTATGTCACGCATCTGATGAAGCGAATTCAGAGAGGCCCAGTAAGAGGTATCTCCATCAAGCTGCAGGAGGAGGAGAGAGAAAGGAGAGACAATTATGTTCCTGAGGTCTCAGCCTTGGATCAGGAGATTATTGAAGTAGATCCTGACACTAAGGAAATGCTGAAGCTTTTGGACTTCGGCAGTCTGTCCAACCTTCAGGTCACTCAGCCTACAGTTGGGATGAATTTCAAAACGCCTCGGGGACCTGTTTGAATTTTTTCTGTAGTGCTGTATTATTTTCAATAAATCTGGGACAACAGCCTT